For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VIDSPNEPPRLANAAERRTWEALVDQVQADDLVVPGQRVTDHLKDHEVDFVVGLEGAGIVCLEVKGGEVW HDGDGWRQTRGGRQCTIEPVRQAREACYALRDFVEKDPRWTQGRLRWDHVVVLPNTELPADFGLPECPRW KVIDRNDLPHLVDRLREVLLKQELDRPLLTGDGVDQLRVALSGRGLPQRDVVARALANEDAADTLTEQQA VILNAARLLNRIEVRGGAGSGKTFLAMEQARRLAQDGQRVALVCYSHGLASYLERVTATWPRRQQPAYVG EFHALGVQWGAPEGPDEALRTEQTVQFWEHDLPSQMTELAAQLEPGHRFDAVVVDEAQDFADAWWDPLLG ALHDPVESGLYVFSDEGQRVFNRYGSPPVPLVPLILDHNVRNTRQIANAFQPLVDHPMRFLGGDGPQVTF VACDRDDALGVGDDQVDSLLDAGWRPEDIALLTTGSRHPEQVERQRDGNTAYWDTFWDTDQVFYGHVLGF KGLERRCVVLVINEQNKFDRSRERLYVGLSRARDQLVVCGDPEFICDVGGADLARRLGI
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_1288 | - | - | 100% (549) | hypothetical protein MSMEG_1288 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_5176 | - | 0.0 | 77.11% (546) | hypothetical protein Mflv_5176 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_0010 | - | 0.0 | 83.15% (546) | conserved hypothetical protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_1146 | - | 0.0 | 78.45% (543) | hypothetical protein Mvan_1146 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_5176|M.gilvum_PYR-GCK MAITPDETPRLANNAERKVYQLLLDQLGDGDLVIPGKRVTDHLKDHEIDF
Mvan_1146|M.vanbaalenii_PYR-1 MTITAAETPRLANGAERKVWQALIDQLEPGDLVIPGKRVTDHLKDHEIDF
MSMEG_1288|M.smegmatis_MC2_155 MIDSPNEPPRLANAAERRTWEALVDQVQADDLVVPGQRVTDHLKDHEVDF
TH_0010|M.thermoresistible__bu VTITPDEYPRLN-ASERSTYQALVDQLEPNDLLVPGQRVTDHLKDHEVDF
: :. * *** :** .:: *:**: .**::**:**********:**
Mflv_5176|M.gilvum_PYR-GCK CIALEGAGVLCLEVKGGEVWHDGKGWRQLRGGREVSIEPVRQAREACYAL
Mvan_1146|M.vanbaalenii_PYR-1 FVAIEGAGIVCLEVKGGEVWHDGDTWRQKRRGREVDIDPVRQAREACYAL
MSMEG_1288|M.smegmatis_MC2_155 VVGLEGAGIVCLEVKGGEVWHDGDGWRQTRGGRQCTIEPVRQAREACYAL
TH_0010|M.thermoresistible__bu VVGIEGAGIVCVEVKGGEVWHDGDGWRQKRGGREVSIHPVRQAREACYAL
:.:****::*:***********. *** * **: *.************
Mflv_5176|M.gilvum_PYR-GCK RDFVEKDPRWSQHRLRWDHVVVLPNTELPQDFALPECPRWKVVDRTDLAD
Mvan_1146|M.vanbaalenii_PYR-1 RSFIENDPRWSQGRLRWDHVVVLPNTDLPDDFALPDCPRWKVIDRSDLTD
MSMEG_1288|M.smegmatis_MC2_155 RDFVEKDPRWTQGRLRWDHVVVLPNTELPADFGLPECPRWKVIDRNDLPH
TH_0010|M.thermoresistible__bu RDFIEKDPRWTQGRLRWDHVIVLPNTELPDDFGLPECPRWKVIDRNDLPN
*.*:*:****:* *******:*****:** **.**:******:**.**..
Mflv_5176|M.gilvum_PYR-GCK LAARLRRILLDQELDRPLLTAAGIGQLTQVLDGRGLPQRSVVARALENED
Mvan_1146|M.vanbaalenii_PYR-1 IAAKLRHVLHSQELDRPFLSKDGIDQLGEALSGRGLPQRSVVSRALENED
MSMEG_1288|M.smegmatis_MC2_155 LVDRLREVLLKQELDRPLLTGDGVDQLRVALSGRGLPQRDVVARALANED
TH_0010|M.thermoresistible__bu IVEKLRYVLLNQKLDRPLLTKEGIDQLATALSGRGLPQRDVVARALANED
:. :** :* .*:****:*: *:.** .*.*******.**:*** ***
Mflv_5176|M.gilvum_PYR-GCK AADVLTEQQSVILDAIKLLHRVEIRGGAGSGKTFLAMEQARRLARAGRRV
Mvan_1146|M.vanbaalenii_PYR-1 AADILTEHQSVILDAIRLLNRVEIRGGAGSGKTFLAMEQARRLARDGQRV
MSMEG_1288|M.smegmatis_MC2_155 AADTLTEQQAVILNAARLLNRIEVRGGAGSGKTFLAMEQARRLAQDGQRV
TH_0010|M.thermoresistible__bu AADALTEHQAVILDAIRMLNRVEVRGGAGSGKTFLAVEQARRLAQRGQRV
*** ***:*:***:* ::*:*:*:************:*******: *:**
Mflv_5176|M.gilvum_PYR-GCK ALVCYSHGLASYLERITATWNRRHRPAYVGEFHDLGKQWGAPAGPDESVR
Mvan_1146|M.vanbaalenii_PYR-1 ALVCYSHGLASYLERITAAWNRRQQPAYVGEFHDLGKRWGAPAGPDESLR
MSMEG_1288|M.smegmatis_MC2_155 ALVCYSHGLASYLERVTATWPRRQQPAYVGEFHALGVQWGAPEGPDEALR
TH_0010|M.thermoresistible__bu ALVCYSHGLASYLERITASWPRRHRPAYVGEFHALGMQWGAPEGPDESVR
***************:**:* **::******** ** :**** ****::*
Mflv_5176|M.gilvum_PYR-GCK NDETVKFWEHDLPSQMTRLATQLDPGHRFDAIVVDEAQDFADAWWDPLLA
Mvan_1146|M.vanbaalenii_PYR-1 TEQTVQFWEHDLPAQMTELAMQLDDGQRFDAIVVDEAQDFADAWWDPLLA
MSMEG_1288|M.smegmatis_MC2_155 TEQTVQFWEHDLPSQMTELAAQLEPGHRFDAVVVDEAQDFADAWWDPLLG
TH_0010|M.thermoresistible__bu TEESVQFWEHDLPAQMAELAARLEPGQRFDSVVVDEAQDFADAWWDPLLA
.:::*:*******:**:.** :*: *:***::*****************.
Mflv_5176|M.gilvum_PYR-GCK ALKDDETGGLYLFSDEGQRVFDRFGAPPVPLVPLILDHNLRNTRQIADAF
Mvan_1146|M.vanbaalenii_PYR-1 ALKDDETGGLYVFTDEGQRVFHRHGSPPVPLVPLVLDHNLRNTRQIANAF
MSMEG_1288|M.smegmatis_MC2_155 ALHDPVESGLYVFSDEGQRVFNRYGSPPVPLVPLILDHNVRNTRQIANAF
TH_0010|M.thermoresistible__bu ALDDPVEGGIYVFSDEGQRVFDRYGVPPVPLVPLILDHNLRNTRQIARAF
**.* .*:*:*:*******.*.* ********:****:******* **
Mflv_5176|M.gilvum_PYR-GCK QPLVDHPMRALGADGPAVKYVPCSREDAMDTGDDEVELLLDQGWRPEDVA
Mvan_1146|M.vanbaalenii_PYR-1 QPLVDHPMRFLGGEGPAVKYVACSRAEAMNAGDDEVELLLEQGWRPEDVA
MSMEG_1288|M.smegmatis_MC2_155 QPLVDHPMRFLGGDGPQVTFVACDRDDALGVGDDQVDSLLDAGWRPEDIA
TH_0010|M.thermoresistible__bu QPLVNHPMRFRGGDGPAVTFIPCDREEAMDVGDDQVDALLEQGWRPEDLA
****:**** *.:** *.::.*.* :*:..***:*: **: ******:*
Mflv_5176|M.gilvum_PYR-GCK LLTTGSRHPEQRERQAAGSAAYWDSFWDAEQVFYGHVLGFKGLERRVVVL
Mvan_1146|M.vanbaalenii_PYR-1 LLTTGTRHPEQRERQAAGNAAYWDSFWDADQVFYGHVLGFKGLERRAVVL
MSMEG_1288|M.smegmatis_MC2_155 LLTTGSRHPEQVERQRDGNTAYWDTFWDTDQVFYGHVLGFKGLERRCVVL
TH_0010|M.thermoresistible__bu LLTTGSRHPEQVARQAEGHKAYWDTFWDTDQVFYGHVLGFKGLERRCVVL
*****:***** ** * ****:***::**************** ***
Mflv_5176|M.gilvum_PYR-GCK VVNEESAFERSRERLYVGLSRARDQLVVCGDPEFLRTVGGPDLARRLNIP
Mvan_1146|M.vanbaalenii_PYR-1 VVNEEAAFERSRERLYVGLSRARDQLVVCGDPDFLRDVGGPDLARRLNIP
MSMEG_1288|M.smegmatis_MC2_155 VINEQNKFDRSRERLYVGLSRARDQLVVCGDPEFICDVGGADLARRLGI-
TH_0010|M.thermoresistible__bu VVNETGKFERSRERLYVGLSRARDQLVVCGDPDFIRAVGGPDLARRLNIP
*:** *:***********************:*: ***.******.*
Mflv_5176|M.gilvum_PYR-GCK Q-
Mvan_1146|M.vanbaalenii_PYR-1 G-
MSMEG_1288|M.smegmatis_MC2_155 --
TH_0010|M.thermoresistible__bu AD