For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VDYDAITALRDRHPAWRLLRAGNASLVLSFLGEFFVEANRGACPAGQVAEALDNHLYALSAGSGESRYPK EPRAYLEDWAATDAGYLRRFYPPGDDEVHYEVTPAFEKAYAWVVNLQSRSFVGTESRLHTVVALLRQIVH GTEVQPDVRLAELRRRRAELEAEIAAVEAGDIAVLDPTAVRDRYQQLSTTARELLSDFREVEENFRLLDR AARERIAAWEGSKGGLLEELVGSRSEITGSDQGRSFQAFYDFLLSEQRQAELAELIAKVSALDVLEADPR IRRIHHDWSEAADRAQRTVRQISEQLRRFLDDQVWLENRRVLDLVRAVESIALEVRDAPPTFGLEVDEPG IEIALPFERPLYQPPTEVAVESHVSAATEEVNADLLFAQTYIDQARLADTIRAVLPEDSSALLSDVVAVH PIEQGAAEIVGYLALNEDDLAIDVDDTEETVLEYPDPADPDITKRARLPKVTVRRR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_1279 | - | - | 100% (476) | hypothetical protein MSMEG_1279 |
| M. smegmatis MC2 155 | MSMEG_0368 | - | 1e-05 | 22.64% (349) | hypothetical protein MSMEG_0368 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1490 | - | 6e-07 | 20.99% (443) | hypothetical protein MAB_1490 |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_0008 | - | 3e-07 | 20.39% (363) | hypothetical protein MSMEG_0368 |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_1131 | - | 0.0 | 82.11% (475) | hypothetical protein Mvan_1131 |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_1279|M.smegmatis_MC2_155 ------------------------MDYDAITALRDRHPAWRLLRAGNASL
Mvan_1131|M.vanbaalenii_PYR-1 --------------MSPPLPSLKVVDYAALTTLRERHPAWRLLRAGNAAL
MAB_1490|M.abscessus_ATCC_1997 ---------------MND---LTVEELFAHNDDVQKSRAVRLLAAKNLAP
TH_0008|M.thermoresistible__bu LDRLIGAEGDIEDQLVDDNRGMSAADLLGMNRELQGSRAIRLLATHNLGL
: . . : * *** : * .
MSMEG_1279|M.smegmatis_MC2_155 VLSFLGEFFVEANRGACPAGQVAEALDNHLYALSAGSGESRYPKEPRAYL
Mvan_1131|M.vanbaalenii_PYR-1 VLSFLGQFFVEDNRGACSASVLADALDDHLYALNAD--EVRYPKQPRAYL
MAB_1490|M.abscessus_ATCC_1997 YITLMERHLDR--SAKVSEPQLVAKLDRDLSAVG------LGEQSGLALI
TH_0008|M.thermoresistible__bu YATLMERHLN---EGVVAETELVIRLERDLAELDDH----PDGQSGLALI
::: ..: . . :. *: .* :. :. * :
MSMEG_1279|M.smegmatis_MC2_155 EDWAATDAGYLRRFYPPG--DDEVHYEVTPAFEKAYAWVVNLQSRSFVGT
Mvan_1131|M.vanbaalenii_PYR-1 EDWAATDAGYLRRFYPPG--DDEVHYEATPAFEKAYAWVHSLQGRSFVGT
MAB_1490|M.abscessus_ATCC_1997 KSWAS--DGWLHRASDGTGPDAENVCSLTEDARSALAFVRRLRRADTVAT
TH_0008|M.thermoresistible__bu KNWAS--QGWLHRIVDDR--TGQNVCYLTQDARRALDFLRGLRRNDTIAT
:.**: *:*:* : * . * :: *: . :.*
MSMEG_1279|M.smegmatis_MC2_155 ESRLHTVVALLRQIVHGTEVQPDVRLAELRRRRAELEAEIAAVEAGDIAV
Mvan_1131|M.vanbaalenii_PYR-1 ESRLHTVIALLRQIVQGTETEPEVRLADLRRRRDELDAEIAAVEAGHVAI
MAB_1490|M.abscessus_ATCC_1997 GGSIAGIAAGLKRVATQLDGDPSRLRADIEAQIAELQTQLHAIDDGYRPE
TH_0008|M.thermoresistible__bu GGSINGIAARLKQVAIRVGGDPARIRKDIEAQIAALQAELEALEAGERPE
. : : * *:::. :* ::. : *:::: *:: * .
MSMEG_1279|M.smegmatis_MC2_155 LDPTAVRDRYQQLSTTARELLSDFREVEENFRLLDRAARERIAAWEGSKG
Mvan_1131|M.vanbaalenii_PYR-1 LDATGVRDRYQQLATTARELLSDFREVEENFRLLDRAAREKIAAWDGSKG
MAB_1490|M.abscessus_ATCC_1997 PDIVDLEDETRAIAYQMEQVITDIVRYGSMQNEITAGLIDAAEDSDSGFR
TH_0008|M.thermoresistible__bu PDVTDCYDEARAIALQMERIITDIGQYGTMIEQATA-ALDEPIDSNAAYR
* . *. : :: ..:::*: . . : :..
MSMEG_1279|M.smegmatis_MC2_155 GLLEELVGSRSEITGSDQGRSFQAFYDFLLS-EQRQAELAELIAKVSALD
Mvan_1131|M.vanbaalenii_PYR-1 ELLAELIGSRSEIAGSDQGRSFQAFFDFLLS-EQRQTELADLLAKVTALD
MAB_1490|M.abscessus_ATCC_1997 DRARRMFADYDALFDSRERASYSAFTRTIQDPDQRAALRSDIACVAEGLP
TH_0008|M.thermoresistible__bu ERQRRLYADYQAAWESSGRDSHRAFLRMVNDPDQRAEFEADVAAVAEALP
.: .. . * *. ** : . :** ::: . . .*
MSMEG_1279|M.smegmatis_MC2_155 VLEADPR--IRRIHHDWSEAADRAQRTVRQISEQLRRFLDDQVWLENR--
Mvan_1131|M.vanbaalenii_PYR-1 SVDADER--IRGIHHDWSEAADRAQRTVRQISEQLRRFLDDQVWLENR--
MAB_1490|M.abscessus_ATCC_1997 DLDPGLREVMRNFFKLVSQQIAEVSRIEQRCAQRIRRFFAAGTTEQARGR
TH_0008|M.thermoresistible__bu ALDPQLRKVMTGFFELVGHQIDEVERIQQRCAQRIKRFTAFGTLEQSRGI
::. * : :.. .. ...* :: :::::** . : *
MSMEG_1279|M.smegmatis_MC2_155 -RVLDLVRAVESIALEVRDAPPTFGLEVDEPGIEIALPFERPLYQPPTEV
Mvan_1131|M.vanbaalenii_PYR-1 -RVLDLVRAVEAAALDVRDTPPSFGLEVDEQGIDIALPFERPLYQTPVAV
MAB_1490|M.abscessus_ATCC_1997 ARQLNDALAAGHALLKMSTADSPIDAELPIGRSAAAAIGALSFTIKDTAP
TH_0008|M.thermoresistible__bu ARQLNEAIAAARALLKTSLADSRLDIEVPLTRHAISSVGALSFKISDLSV
* *: . *. *. : . :. *: : .:
MSMEG_1279|M.smegmatis_MC2_155 AVESHVSAATEEVNADLLFAQTYIDQARLADTIRAVLPEDSSALLSDVVA
Mvan_1131|M.vanbaalenii_PYR-1 AVESRIADGTENVDADLLFTQTYVDQVRLAETIRAVLPENSSALLSDVIA
MAB_1490|M.abscessus_ATCC_1997 PVLAQDAPSGPLDLSGFSALATQVDMAALADTVNSAIASGPVSLPDMISH
TH_0008|M.thermoresistible__bu PKPAEPAG-GEVDLSSFAALTTQVDATAMAERLNTELASGPVSLPQAVDL
. :. : :.: * :* . :*: :.: :.... :* . :
MSMEG_1279|M.smegmatis_MC2_155 VHPIEQG--AAEIVGYLALNEDDLAIDVD-DTEETVLEYPDPADPDITKR
Mvan_1131|M.vanbaalenii_PYR-1 VHPIEQG--AAEIVGYLALNDDDVSVDMD-DTDETVLDYPDPAHPDVTKR
MAB_1490|M.abscessus_ATCC_1997 VEAP----YLGDVIVLWSLALKQ-DNTADRESVKVKFRSLDGQDRVMEVP
TH_0008|M.thermoresistible__bu VDGAGQGAYLGHVIVLWSWALKQPGVDGDCPSTWVRFRSPDGRDRAIEVP
*. ..:: : .: * : . : * . :
MSMEG_1279|M.smegmatis_MC2_155 ARLPKVTVRRR--------
Mvan_1131|M.vanbaalenii_PYR-1 ARLPKVTVRRHGGQQP---
MAB_1490|M.abscessus_ATCC_1997 QLMFREPVLATLEEEGSTL
TH_0008|M.thermoresistible__bu NLMFTEPITLAGALS----
: .: