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M. smegmatis MC2 155 MSMEG_1222 (-)

AYVRKVRTASGAVAVQVARKDAGKVVILAHLGSAHTDAELGILLEQAKAMVIGGQVALDFEVAARAQSMA
DVADFREQRVLGEKSGPSAAAPVVPPGRTVGASSRLLYDLLGHVYDWHGFDTVGDAVFRDLVIARIVEPT
SKLDASRVLADLGAQLVSYKTIDRHVRTIHARGHRDVIAEKCFAYATDCGGLSLILYDVTTLYFAAESED
SLRKVGYSKERRVDPQIVVGLLVDRTGFPLEIGCFEGNTAETTTIVPIITSFLERHNLVGTPMVVAADAG
MLSQTNLTALDEQELSFIVGSRMTKAPGDLESHFHWNGDVFTDGQIIDTVTPRHGNTRVNDIKKRAEPVW
DPERDTGAWRAIWSYSAKRARRDQKTLAAQEARARAIVAGEKKAKTARFVKTHGADRALDQASLARAQSL
VGLKGYVTNIPVTVMPAAEVIAKYHDLWHVEKSFRMSKSDLDARPMFNRIRDAIEAHLTIVFAALAVSHT
IQSRTGLSIAKVIKLLRPLRSATITINGATQTFPPAIPDTERQILTNLGFNPGY*

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_1222	-	-	100% (545)	ISMsm6, transposase
M. smegmatis MC2 155	MSMEG_5181	-	3e-82	36.38% (514)	IS1549, transposase
M. smegmatis MC2 155	MSMEG_3433	-	3e-82	36.38% (514)	IS1549, transposase

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	-	-	-	-	-
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	-	-	-	-	-
M. abscessus ATCC 19977	-	-	-	-	-
M. marinum M	-	-	-	-	-
M. avium 104	-	-	-	-	-
M. thermoresistible (build 8)	TH_2016	-	2e-57	42.18% (294)	IS1549, transposase
M. ulcerans Agy99	-	-	-	-	-
M. vanbaalenii PYR-1	Mvan_5357	-	0.0	70.88% (546)	transposase, IS4 family protein

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_1222|M.smegmatis_MC2_155      -MAYVRKVRTASGAVAVQVARKDAGKVVILAHLGSAHTDAELGILLEQAK
Mvan_5357|M.vanbaalenii_PYR-1       MVAYVRKVRTASGAVAVQVVRKHRGQRTILAHVGSAHTDAQLGILLERAR
TH_2016|M.thermoresistible__bu      --------------------------------------------------
                                                                                      

MSMEG_1222|M.smegmatis_MC2_155      AMVIGGQVALDFEVAARAQSMADVADFREQRVLGEKSGPSAAAPVVPPGR
Mvan_5357|M.vanbaalenii_PYR-1       QIAAEDQGVLDIEVPARTQSIDTIADWRAGTLSLSPGGPKGAP--VPAGR
TH_2016|M.thermoresistible__bu      --------------------------------------------------
                                                                                      

MSMEG_1222|M.smegmatis_MC2_155      TVGASSRLLYDLLGHVYDWHGFDTVGDAVFRDLVIARIVEPTSKLDASRV
Mvan_5357|M.vanbaalenii_PYR-1       TAATHSRLLYDVLGTVYDWLGFDVVDDAVFRDLVIARIVEPTSKADAARV
TH_2016|M.thermoresistible__bu      --------------------------------------------------
                                                                                      

MSMEG_1222|M.smegmatis_MC2_155      LADLGAQLVSYKTIDRHVRTIHARGHRDVIAEKCFAYATDCGGLSLILYD
Mvan_5357|M.vanbaalenii_PYR-1       LADLGAEAMSYRTIQRHLGKAKSNRYREQIAARCFTHAADRGGLSLLLYD
TH_2016|M.thermoresistible__bu      ---------------------------------------------LVLYD
                                                                                 *:***

MSMEG_1222|M.smegmatis_MC2_155      VTTLYFAAESEDSLRKVGYSKERRVDPQIVVGLLVDRTGFPLEIGCFEGN
Mvan_5357|M.vanbaalenii_PYR-1       VTTLYFEAENEDDLRKVGYSKERRVDPQIVVGLLVDRSGFPLEIGCFEGN
TH_2016|M.thermoresistible__bu      VSTLHFETDVADGFREPGFSKERRLDPQITLGVLTDASGFPLNVAAFEGN
                                    *:**:* ::  *.:*: *:*****:****.:*:*.* :****::..****

MSMEG_1222|M.smegmatis_MC2_155      TAETTTIVPIITSFLERHNLVGTPMVVAADAGMLSQTNLTALDEQELSFI
Mvan_5357|M.vanbaalenii_PYR-1       TAETTTLIPVVTAFVERHDLGDTPMVIAADAGMLSATNLAALDDAGLGFI
TH_2016|M.thermoresistible__bu      KAETATMVPVINAFKAAHRLTD--VTVVADAGMISESNQVALQAAGLSFI
                                    .***:*::*::.:*   * * .  :.:.*****:* :* .**:   *.**

MSMEG_1222|M.smegmatis_MC2_155      VGSRMTKAPGDLESHFHWNGDVFTDGQIIDTVTPRHGNTRVNDIKKRAEP
Mvan_5357|M.vanbaalenii_PYR-1       VGSRMTKAPGDLESHFHWHGDVFTDGQIIDTVTPRHANSTVNDAAHRAEP
TH_2016|M.thermoresistible__bu      LGTRIPYLPDVVR---QWR-DDHPDDQVPDGLVLTQPWPSTSAEKARGIP
                                    :*:*:.  *. :.   :*. * ..*.*: * :.  :  . ..    *. *

MSMEG_1222|M.smegmatis_MC2_155      VWDPERDTGAWRAIWSYSAKRARRDQKTLAAQEARARAIVAGEKKAKTAR
Mvan_5357|M.vanbaalenii_PYR-1       IWDPDEHTNAWRAIWAYSAKRARRDQKTLYAQEARARAVINGERAAKSTR
TH_2016|M.thermoresistible__bu      DR---------VIYYQYRHDRARRTLRGIDEQIAKAQRAVDGHAPVKRNR
                                                  : *  .****  : :  * *:*:  : *.  .*  *

MSMEG_1222|M.smegmatis_MC2_155      FVKTHGADRALDQASLARAQSLVGLKGYVTNIPVTVMPAAEVIAKYHDLW
Mvan_5357|M.vanbaalenii_PYR-1       FVKTAAGDRILDEAALARAQSLVGLKGYVTNVPATIMPAGEVIAHYHELW
TH_2016|M.thermoresistible__bu      FIQLTGATRSVNRTLEAKVRALAGWKGYTTNL--TSQPAEFIIGAYHQLW
                                    *::  .. * ::.:  *:.::*.* ***.**:  *  **  :*. **:**

MSMEG_1222|M.smegmatis_MC2_155      HVEKSFRMSKSDLDARPMFNRIRDAIEAHLTIVFAALAVSHTIQSRTGLS
Mvan_5357|M.vanbaalenii_PYR-1       RVERSFRMSKSDLRARPMFHRTRDAIEAHLTIVVTALAVAHNIQERTGLA
TH_2016|M.thermoresistible__bu      RIEKSFRMSKHDLAARPIYHRTRDSIEAHLTIVFAX-------RQR----
                                    ::*:****** ** ***:::* **:********.:        :.*    

MSMEG_1222|M.smegmatis_MC2_155      IAKVIKLLRPLRSATITINGATQTFPPAIPDTERQILTNLGFN-PGY
Mvan_5357|M.vanbaalenii_PYR-1       IANVVKQLRPLRSATIAINGTTETFPPQVPEAQQKILASLNIPEPGH
TH_2016|M.thermoresistible__bu      -----------------------------------------------