For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LQTVAIRGYRSLREVVLPLTELTVITGANGTGKSSVYRALRLLADCGRGQVIGSLAREGGLQSVLWAGPE RPSEEAQGATRTRPVSLEMGFAADDFGYVVDLGLPQMAGAPAHRTPSAFTLDPEIKREAVFAGPVLRPSS TLVRRIREFAETAAESGRGFDELSRSLPAYRSVLAEYAHPHALPELSAVSERLRDWRFYDGFRVDAGAPA RHPHVGTRTPVLSDDGSDLAAAVQTIIEAGLDDLQRAVADAFDGARVSVAASDGLFDLQLHQRGMLRPLR AAELSDGTLRFLLWAAALLSPSPPSLMVLNEPETSLHPDLVRPLASLIRTAATRTQVVVVTHSRALLEFL DTTPIGDDGPGGAVEIELYKQWGETKVTGQGLLSTPSWHWGNR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_1013 | - | - | 100% (394) | hypothetical protein MSMEG_1013 |
M. smegmatis MC2 155 | MSMEG_2293 | - | 0.0 | 100.00% (394) | hypothetical protein MSMEG_2293 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_4312 | - | 1e-154 | 70.93% (399) | hypothetical protein Mflv_4312 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | MLBr_01793 | - | 3e-18 | 52.83% (106) | hypothetical protein MLBr_01793 |
M. abscessus ATCC 19977 | MAB_1548c | - | 1e-145 | 64.71% (408) | hypothetical protein MAB_1548c |
M. marinum M | MMAR_0146 | - | 1e-105 | 51.00% (402) | ATPase |
M. avium 104 | MAV_2144 | - | 1e-179 | 79.25% (400) | hypothetical protein MAV_2144 |
M. thermoresistible (build 8) | TH_0007 | - | 1e-161 | 74.69% (399) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4951 | - | 1e-104 | 50.75% (402) | ATPase |
M. vanbaalenii PYR-1 | Mvan_2035 | - | 1e-158 | 71.68% (399) | hypothetical protein Mvan_2035 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4312|M.gilvum_PYR-GCK ------------------MLETVAIRGYRSLRDLVLPLRRLTVITGANGT Mvan_2035|M.vanbaalenii_PYR-1 ------------------MLDTVAIRGYRSLREIVLPLRRLTVITGANGT MSMEG_1013|M.smegmatis_MC2_155 ------------------MLQTVAIRGYRSLREVVLPLTELTVITGANGT MAV_2144|M.avium_104 ------MADRTVG----LMLHTVAVRGYRSLREVVLPLGRLSVITGANGT TH_0007|M.thermoresistible__bu VRRPGRQVDDVIGNDRVSMLQTVAIRGYRSLREVVLPLSRLTVITGANGT MLBr_01793|M.leprae_Br4923 -------------------------------------------------- MAB_1548c|M.abscessus_ATCC_199 ------------------MLTTVAIRGYRSLRDIVLPLAQLTVITGANGT MMAR_0146|M.marinum_M ------------------MLVTVAVENYRSLRQLVVPLHQLNVVTGANGS MUL_4951|M.ulcerans_Agy99 ------------------MLVTVAVENYRSLRQLVVPLHQLNVVTGANGS Mflv_4312|M.gilvum_PYR-GCK GKSSLYRALRLLADCGRGEVIGSFAREGGVASALWAGPEHLGGARRT--G Mvan_2035|M.vanbaalenii_PYR-1 GKSSLYRALRLLADCGRGEVIASFAREGGVESAMWAGPEHLGGARRT--G MSMEG_1013|M.smegmatis_MC2_155 GKSSVYRALRLLADCGRGQVIGSLAREGGLQSVLWAGPERPS-------E MAV_2144|M.avium_104 GKSSLYRALRLLADCGRGEVIGSLAREGGLQSVLWAGPEQPAGARRS--G TH_0007|M.thermoresistible__bu GKSSLYRALRLLADCGRGEVIGSLARAGGLQSVLWAGPEHPNADERT--G MLBr_01793|M.leprae_Br4923 -------------------------------------------------- MAB_1548c|M.abscessus_ATCC_199 GKSSLYRALQLLADCGSGEIIGSLARQGGLQSAMWAGPESLNRARRT--G MMAR_0146|M.marinum_M GKSNLYRALRLMADSARNGAVAALAREGGLSSTMWAGPAVIGKSVRQGRH MUL_4951|M.ulcerans_Agy99 GKSNLYRALRLMADSARNGAVAALAREGGLSSTMWAGPAVIGKSVRQGRH Mflv_4312|M.gilvum_PYR-GCK TAQGGPRSRSVSIELGYAGDDFGYLIDLGLPQATET-------AFGRDPE Mvan_2035|M.vanbaalenii_PYR-1 TAQGGPRTRPGSIELGYAADDFGYLIDLGLPQARET-------AFGRDPE MSMEG_1013|M.smegmatis_MC2_155 EAQGATRTRPVSLEMGFAADDFGYVVDLGLPQMAGAPAHRTPSAFTLDPE MAV_2144|M.avium_104 KTEGTVRTRPVSLELGFAADDFGYLVDLGLPQSAGK------SVFARDPE TH_0007|M.thermoresistible__bu AAHGTRRTRPVSLELGFAATDFGYLIDLGLPQSAGPG-----SVFARDPE MLBr_01793|M.leprae_Br4923 -------------------------------------------------- MAB_1548c|M.abscessus_ATCC_199 VVQGTRRTRPVSIELGYASTDFGYLVDLGLPTPSES-------AFGRDPE MMAR_0146|M.marinum_M QVQGTVRTDSVSLKLGFAGSDFGYAMDLGLPQASIS-------KFKLDPE MUL_4951|M.ulcerans_Agy99 QVQGTVRTDSVSLKLGFAGSDFSYAMDLGLPQASIS-------KFKLDPE Mflv_4312|M.gilvum_PYR-GCK IKRELVFAGPVARSTTTLVRRVRGMVEVASDTGRGFDELARNLPAHRSVL Mvan_2035|M.vanbaalenii_PYR-1 VKRELVFAGPVARPTATLVRRVRGLVEVAADTGRGFDALASNLPAHRSVL MSMEG_1013|M.smegmatis_MC2_155 IKREAVFAGPVLRPSSTLVRRIREFAETAAESGRGFDELSRSLPAYRSVL MAV_2144|M.avium_104 IKREVLFAGPVLRPSTTLVRRSRGFAEASADSGSGFDELSRSLPSYHSVL TH_0007|M.thermoresistible__bu IKREVVFAGPVPRPAATLVRRTRDHAEMRADTG--FEELSRSLPSYHSVL MLBr_01793|M.leprae_Br4923 -------------------------------------------------- MAB_1548c|M.abscessus_ATCC_199 IKGEAVFTGPSLRPSATLVRRTRPVVEARSESGRGFEGFSRSLPTYRSVL MMAR_0146|M.marinum_M VKVEALWVGPVWRSATAIAERGGPVARLR-DGDDNWHLITDALRPFDSML MUL_4951|M.ulcerans_Agy99 VKVEALWVGPVWRSATAIAERGGPVARLR-DGDDNWHLITDALRPFDSML Mflv_4312|M.gilvum_PYR-GCK TDWAG--ASPELAMVRERLRNWRFYDGFRADADAPARRPQVGTRTPVLAD Mvan_2035|M.vanbaalenii_PYR-1 ADWAG--AVPELVMVRERLRDWRFYDGFRADSHAPARMPQVGTRTPVLAD MSMEG_1013|M.smegmatis_MC2_155 AEYAHPHALPELSAVSERLRDWRFYDGFRVDAGAPARHPHVGTRTPVLSD MAV_2144|M.avium_104 AEYAHPHALPELAAVRDRLRGWRFYDGFRVDAGAPARHPQVGTRTPVLAD TH_0007|M.thermoresistible__bu AEYAHPEALPELAAVRNRLRRWRFYDGFRVDAAAPARRPQVGTRTPVLSD MLBr_01793|M.leprae_Br4923 -----------------------------MNATAPARPPQGDTRTPVLAD MAB_1548c|M.abscessus_ATCC_199 SEFAG--KFPELGAVRDTLRGWRFYDGFRVDALAPARQPQIGTRTTVLSN MMAR_0146|M.marinum_M SELADPVRAPELIEMRERIRNWRFYDHLRTDADAPARQARIGTRTTVLGH MUL_4951|M.ulcerans_Agy99 SELADPVRAPELIEMRERIRNWRFYDHLRTDADAPARQARIGTRTTVLGH :: **** .: .***.**.. Mflv_4312|M.gilvum_PYR-GCK DGSDLAAAIQTILETGNGD-LARAVDAAFDGATVSVAITDGLFDLQLHQR Mvan_2035|M.vanbaalenii_PYR-1 DGADLAAAVQTILETGTDD-FGRAVADAFDGATVSVSVTDGLFDLHLRQR MSMEG_1013|M.smegmatis_MC2_155 DGSDLAAAVQTIIEAGLDD-LQRAVADAFDGARVSVAASDGLFDLQLHQR MAV_2144|M.avium_104 DGSDLAAAIQTILESGFDD-LDRAVAEAFDGATVSVAIHDGLFDLQLRQR TH_0007|M.thermoresistible__bu DGHDLAAAIATITETGFDD-LARAVGDAFDGATVSVAVHDGLFELQVRQR MLBr_01793|M.leprae_Br4923 DNSDLAAAIRRSSSQDSMS-GDSPSRTHSMRATVSVVIHDGLFDLQLQQH MAB_1548c|M.abscessus_ATCC_199 DGSDVAAAIQTIVETGNDT-LDKVVAAAFDGATVAVAVTDGMFNLHVQQP MMAR_0146|M.marinum_M DGADLAAALETIREIGDEAALDEAIDRAFEGSRIDVASDNGRFELALKQP MUL_4951|M.ulcerans_Agy99 DGADLAAALETIREIGDEAALDEAIDRAFEGSRIDVASDNGRFELALKQP *. *:***: . . : : * :* *:* ::* Mflv_4312|M.gilvum_PYR-GCK GMLRPLRSAEISDGTLRFLLWAAALLSPQPPSLMVLNEPETSLHPDLVPP Mvan_2035|M.vanbaalenii_PYR-1 GMLRPLRSAEMSDGTLRFLLWAAALLSPQPPSLMVLNEPETSLHPDLVRP MSMEG_1013|M.smegmatis_MC2_155 GMLRPLRAAELSDGTLRFLLWAAALLSPSPPSLMVLNEPETSLHPDLVRP MAV_2144|M.avium_104 GMLRALRSAELSDGTLRFLLWAAALLSPQPPSLMVLNEPETSLHPDLVAP TH_0007|M.thermoresistible__bu GMLRPLRAAELSDGTLRFLLWTAALLSPEPPSLMVLNEPETSLHPELVRP MLBr_01793|M.leprae_Br4923 EMLR---AAELYDGTLRFLLWTAALFSALALSLI---------------- MAB_1548c|M.abscessus_ATCC_199 GMLRPLRAAELSDGTLRFLLWAAALLSPDPPPLMVLNEPETSLHPDLIAP MMAR_0146|M.marinum_M GMLRPLGAAELSDGTLRYLLWSAALLSPRPPQLLVLNEPETSLHPELLPA MUL_4951|M.ulcerans_Agy99 GMLRPLGAAELSDGTLRYLLWSAALLSPRPPQLLVLNEPETSLHPELLPA *** :**: *****:***:***:*. . *: Mflv_4312|M.gilvum_PYR-GCK LARLIGEAATRTQLVVVTHSAMLRECLGAEPIGTDGD-----------AW Mvan_2035|M.vanbaalenii_PYR-1 LAELIDAAATRTQVVVVTHSATLRTNLGAQPIGSDGD-----------AW MSMEG_1013|M.smegmatis_MC2_155 LASLIRTAATRTQVVVVTHSRALLEFLDTTPIGDDGP---------GGAV MAV_2144|M.avium_104 LASLIRTTAARTQVVVVTHSRSLLEFLDTVPLGEGGAD--------GEAV TH_0007|M.thermoresistible__bu VANLIRAAAQRTQLVVVTHSAALLELLGDAAEG----------------- MLBr_01793|M.leprae_Br4923 -------------------------------------------------- MAB_1548c|M.abscessus_ATCC_199 LATLIQAAAAKTQVVVITHASALMSHLAARPLREILAGEEDYFDDAGPAV MMAR_0146|M.marinum_M LASLIATAAQRSQIIVVTHSEPLVAGLQQAAEVHT--------------- MUL_4951|M.ulcerans_Agy99 LASLIATAAQRSQIIVVTHSEPLVAGLQQAAEVHT--------------- Mflv_4312|M.gilvum_PYR-GCK EIELYKDWGETRVGDQDLSTMPPWDWGRR Mvan_2035|M.vanbaalenii_PYR-1 EIELYKDWGETKIAEQGLLTTPPWDWGKR MSMEG_1013|M.smegmatis_MC2_155 EIELYKQWGETKVTGQGLLSTPSWHWGNR MAV_2144|M.avium_104 EIELYKDWGETRIGGQTLMTTPRWDWGTR TH_0007|M.thermoresistible__bu -VELYKDRGETKVAGQTMLSTPPWDWGSR MLBr_01793|M.leprae_Br4923 ----------------------------- MAB_1548c|M.abscessus_ATCC_199 RLELTKDWGETQIIGLDPLKAPSWHWGSR MMAR_0146|M.marinum_M -IRLTKELGETRIVGQGMLDQPSWHWPPR MUL_4951|M.ulcerans_Agy99 -IRLTKELGETRIVGQGMLDQPSWHWPPR