For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AHTSGTDSKSGAGAEPGDPVVIDCDDCAVRGPACRDCVVSVLLGVPDELMYDERVALEALADAGLAPRLR LVPIRRNRATGVA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_5560 | - | - | 100% (84) | hypothetical protein MMAR_5560 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1973 | - | 2e-20 | 67.19% (64) | hypothetical protein MAB_1973 |
M. avium 104 | MAV_2303 | - | 2e-27 | 84.38% (64) | hypothetical protein MAV_2303 |
M. smegmatis MC2 155 | MSMEG_4257 | - | 1e-22 | 75.00% (64) | hypothetical protein MSMEG_4257 |
M. thermoresistible (build 8) | TH_0996 | - | 7e-25 | 67.50% (80) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_3546 | - | 7e-45 | 98.81% (84) | hypothetical protein MUL_3546 |
M. vanbaalenii PYR-1 | Mvan_3554 | - | 4e-19 | 69.84% (63) | hypothetical protein Mvan_3554 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_5560|M.marinum_M MAH---------TSGTDS-------KSGAGAEPG---------------- MUL_3546|M.ulcerans_Agy99 MAH---------TSGTDS-------KSGAGAEPG---------------- MAV_2303|M.avium_104 -------------------------------------------------- MSMEG_4257|M.smegmatis_MC2_155 MQQRLPGWDDRDGWRDDRDNHWDNERDNDWDKAGPVSQEVREYCDDWDAM TH_0996|M.thermoresistible__bu MTP--------DESLTDR------PRPQDRDEG----------------- MAB_1973|M.abscessus_ATCC_1997 -------------------------------------------------- Mvan_3554|M.vanbaalenii_PYR-1 MTQRRESPDGLVGARRYR-ARTAMERTGAMAQNQWPPGE----------- MMAR_5560|M.marinum_M -------DPVVIDCDDCAVRGPACRDCVVSVLLGVPDELMYDERVALEAL MUL_3546|M.ulcerans_Agy99 -------DPVVIDCDDCAVRGPACRDCVVSVLLGVPDELMYDERVALEAL MAV_2303|M.avium_104 ---------MVIDCDDCAARGPGCRDCVVSVILGVPDTLLQDERAALEVL MSMEG_4257|M.smegmatis_MC2_155 VERTPETGSVAIDCDDCAVRGAGCQDCVVSVLLGVPEKLLDDERRALEVL TH_0996|M.thermoresistible__bu -----DEGTVVIDCDHCAVRGPGCTDCVVSVLLGVPDSLLEDERRALEVL MAB_1973|M.abscessus_ATCC_1997 ---------MLIDCDDCAMRGPGCDDCVVSVLLGVPQTLADDERAALAVL Mvan_3554|M.vanbaalenii_PYR-1 ---GPDTGTVKIDCDDCAVRGPGCQDCVVSVLLGVPETLHIDERRALEVL : ****.** **..* ******:****: * *** ** .* MMAR_5560|M.marinum_M ADAGLAPRLRLVPIR-------RNRAT---------GVA MUL_3546|M.ulcerans_Agy99 ADAGLAPRLRLVPIR-------RNRAT---------GIA MAV_2303|M.avium_104 ADAGLAPRLRLVPIR-------RDRGT---------GVA MSMEG_4257|M.smegmatis_MC2_155 AEAGLAPRLRLVPIH-------RKGEP---------GVA TH_0996|M.thermoresistible__bu AEAGLAPRLRLVPVH-------RGRGS---------GVA MAB_1973|M.abscessus_ATCC_1997 AEAGMAPKLRLVPIQ-------RTYDTPVSAKTPDAGVA Mvan_3554|M.vanbaalenii_PYR-1 AEVGLAPRLSLDPPMNQLVIGCRNEES---------AL- *:.*:**:* * * * . .: