For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DVDAFLLTHRATWDRLDHLVKKRRSLTGAEIDELVELYQRVSTHLSILRSVSSDPLVTGRLSSLVARARA AVTGAHSPLSSTFVRFWTVSFPVVAYRAWRWWLATAVAFFAVAALVGFWVAGSPEVQSVIGTPAEIHELV NHDVESYYSDHPATAFALQVWVNNSWVAAKCIAMSVVLGVPIPLVLFQNAANVGVIAGLMFAAGKGGVLL GLLIPHGLLELTAVFLAGAVGMRLGWSVIAPGDRPRGQVLAEQGRGVVSVAVGLVGVLLVSGLIEAMVTP APLPTFVRIAIGVMAEAAFLGYIVYFGRRAAKAGETGDIEDAPDVVPTG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_5204 | - | - | 100% (330) | hypothetical protein MMAR_5204 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3719c | - | 1e-162 | 83.94% (330) | transmembrane protein |
M. gilvum PYR-GCK | Mflv_1334 | - | 1e-143 | 72.12% (330) | hypothetical protein Mflv_1334 |
M. tuberculosis H37Rv | Rv3694c | - | 1e-162 | 83.94% (330) | transmembrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0387 | - | 1e-132 | 68.90% (328) | hypothetical protein MAB_0387 |
M. avium 104 | MAV_0410 | - | 1e-159 | 82.12% (330) | integral membrane protein |
M. smegmatis MC2 155 | MSMEG_6221 | - | 1e-145 | 73.56% (329) | integral membrane protein |
M. thermoresistible (build 8) | TH_1717 | - | 1e-146 | 75.15% (330) | POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_4277 | - | 0.0 | 99.09% (329) | hypothetical protein MUL_4277 |
M. vanbaalenii PYR-1 | Mvan_5458 | - | 1e-142 | 71.52% (330) | hypothetical protein Mvan_5458 |
CLUSTAL 2.0.9 multiple sequence alignment MAB_0387|M.abscessus_ATCC_1997 MDVDAFVATHRGTWDRLEELLKRRQRLSGPEIDELVDLYQKVSTQLSTVR MSMEG_6221|M.smegmatis_MC2_155 MDVDAFVLAHRATWDRLEQLVKRRRRLTGAEVDELVDLYQRVSTHLSMVR TH_1717|M.thermoresistible__bu VDVDAFVLAHRPTWDRLEELVKRRRRLSGAEVDELVDLYQRVSTHLSMVR Mflv_1334|M.gilvum_PYR-GCK MDVDAFVLANRPTWDRLDHLVKHKRHLTGAEVDELVDLYQRVSTHLSIVR Mvan_5458|M.vanbaalenii_PYR-1 MDVDAFVLANRPTWNRLEHLVKNRRRLTGAEVDELVDLYQRVSTHLSIVR MMAR_5204|M.marinum_M MDVDAFLLTHRATWDRLDHLVKKRRSLTGAEIDELVELYQRVSTHLSILR MUL_4277|M.ulcerans_Agy99 MDVDAFLLTHRATWDRLDHLVKKRRSLTGAEIDELVELYQRVSTHLSILR Mb3719c|M.bovis_AF2122/97 MDVDAFLLTNRGTWDRLDHLIKKRHSLSGAEIDELVELYQRVSTHLSMLR Rv3694c|M.tuberculosis_H37Rv MDVDAFLLTNRGTWDRLDHLIKKRHSLSGAEIDELVELYQRVSTHLSMLR MAV_0410|M.avium_104 MDVDAFVLAHRPTWDRLDRLVGRRRSLSGAEIDELVELYQRVSTHLSMLR :*****: ::* **:**:.*: .:: *:*.*:****:***:***:** :* MAB_0387|M.abscessus_ATCC_1997 SASGDPALVGRLSTLVARARSAVTGEHAPLWRHFIHFWTVSFPVVAYRSW MSMEG_6221|M.smegmatis_MC2_155 SASADAVLVGRLSGLVARARAAVTGAHAPLWREFLRFWTVSFPVVAYRSW TH_1717|M.thermoresistible__bu SATNDPVLVGRLSSLVARARSAVTGAHAPLWSEFTRFWTVSFPVVAYRAG Mflv_1334|M.gilvum_PYR-GCK SSSSDAVLVGKLSGLVARARAVVTGAHAPLWRKFIRFWTVSFPVVVYRSW Mvan_5458|M.vanbaalenii_PYR-1 SSSSDAVLVGKLSGLVARARAVVTGAHAPLWREFTRFWTVSFPVVVYRSW MMAR_5204|M.marinum_M SVSSDPLVTGRLSSLVARARAAVTGAHSPLSSTFVRFWTVSFPVVAYRAW MUL_4277|M.ulcerans_Agy99 SVSSDPLVTGRLPSLVARARAAVTGAHSPLSSTFVRFWTVSFPVVAYRAW Mb3719c|M.bovis_AF2122/97 SASSDQLMTGRLSSLVARARSAVTGAHAPLTRTFIRFWTVSFPVVAYRTW Rv3694c|M.tuberculosis_H37Rv SASSDQLMTGRLSSLVARARSAVTGAHAPLTRTFIRFWTVSFPVVAYRTW MAV_0410|M.avium_104 SASSDSMLVGRLSSLVARARSAVTAAHAPLSSTFVRFWTVSFPVVAYRSW * : * :.*:*. ******:.**. *:** * :*********.**: MAB_0387|M.abscessus_ATCC_1997 RWWLGATLGSMAVAVAVGVWVMHSPELQSVIGTPDEIAHLVNEDFENYYS MSMEG_6221|M.smegmatis_MC2_155 RWWLGTAIGFFIVTIALAMWVAGNPEVHSAIGTPSEIEELVNHDFASYYS TH_1717|M.thermoresistible__bu RWWLGSAIAFLFVAALVALWVAGSPEVRAAVGTPAEIEQLVDHDFAAYYS Mflv_1334|M.gilvum_PYR-GCK RWSVASGAAFYLVAAVIAVWIARSPEVQASVGTPSEIAQLVNHEFANYYS Mvan_5458|M.vanbaalenii_PYR-1 RWWVASGVVFYAVAAVIAVWVAHNPEVQASIGTPSEIEQLVNHEFANYYS MMAR_5204|M.marinum_M RWWLATAVAFFAVAALVGFWVAGSPEVQSVIGTPAEIHELVNHDVESYYS MUL_4277|M.ulcerans_Agy99 RWWLATAVAFFAVAALVGFWVAGSPEVQSVIGTPAEIHELVNHDVESYYS Mb3719c|M.bovis_AF2122/97 RWWLATAVAFFAVVVLIGFWVAGSHEVQSAIGTPTEIDELVSHDVQSYYS Rv3694c|M.tuberculosis_H37Rv RWWLATAVAFFAVVVLIGFWVAGSHEVQSAIGTPTEIDELVSHDVQSYYS MAV_0410|M.avium_104 RWWVATGAAFFAVVVIVALWVAGNPEVQSALGTPSDIDQLVNHDVESYYS ** :.: *. :..*: . *::: :*** :* .**..:. *** MAB_0387|M.abscessus_ATCC_1997 EHPAAAFALHVWINNSWVAAQCIIFAILLGLPIPYVLFMNAANVGVAGGL MSMEG_6221|M.smegmatis_MC2_155 ENPAGSFALRVWVNNAWVAAQCIGFAILLGLPIPYILFQNAANLGLIAGL TH_1717|M.thermoresistible__bu ENPAASFGFRVWVNNSWVAAQCIVFAVLLGIPIPYVLFQNAANVGLSAGL Mflv_1334|M.gilvum_PYR-GCK EHPASSFALQVWVNNAWVTAQCIAMSILLGIPIPYILFQNAANLGLNAGL Mvan_5458|M.vanbaalenii_PYR-1 EHPAGSFALQVWVNNAWVTAQCIAMSVLLGIPIPYILFQNSANLGVNAGL MMAR_5204|M.marinum_M DHPATAFALQVWVNNSWVAAKCIAMSVVLGVPIPLVLFQNAANVGVIAGL MUL_4277|M.ulcerans_Agy99 DHPATAFALEVWVNNSWVAAKCIAMSVVLGVPIPLVLFQNAANVGVIAGL Mb3719c|M.bovis_AF2122/97 EHPAASFALQVWVNNSWVATTCIAMSVVLGLPIPLVLFDNAANVGLIAGL Rv3694c|M.tuberculosis_H37Rv EHPAASFALQVWVNNSWVATTCIAMSVVLGLPIPLVLFDNAANVGLIAGL MAV_0410|M.avium_104 EHPAAAFALQIWVNNSWVSAQCIALSVVLGLPIPLVLFENAANLGVIAGL ::** :*.:.:*:**:**:: ** ::::**:*** :** *:**:*: .** MAB_0387|M.abscessus_ATCC_1997 MIAAGRGDVFFGLILPHGLLELTAVFLAAGAGMRLGWKVIDPGDRPRAQV MSMEG_6221|M.smegmatis_MC2_155 MFDAGAGDVFMGLITPHGLLELTAVFLAGAVGMRLGWTVIAPGDRPRTQA TH_1717|M.thermoresistible__bu MFDAGKGDVFLGLITPHGLLELTAVFLAAAVGMRLGWSVIAPGDRPRTQV Mflv_1334|M.gilvum_PYR-GCK MFEAGRGDVFLGLITPHGLIELTAVFVAAGVGMRLGWSVIAPGDRPRGQV Mvan_5458|M.vanbaalenii_PYR-1 MFQAGKGDIFLGLITPHGLIELTAVFVAAGVGMRLGWSVISPGDRPRGQV MMAR_5204|M.marinum_M MFAAGKGGVLLGLLIPHGLLELTAVFLAGAVGMRLGWSVIAPGDRPRGQV MUL_4277|M.ulcerans_Agy99 MFAAGKGGVLLGLLIPHGLVELTAVFLAGAVGMRLGWSVIAPGDRPRGQV Mb3719c|M.bovis_AF2122/97 MFQAGKGDFLLGLLLPHGLLELTAVFLAAAIGMRLGWSVISAGNRPRGQV Rv3694c|M.tuberculosis_H37Rv MFQAGKGDFLLGLLLPHGLLELTAVFLAAAIGMRLGWSVISAGNRPRGQV MAV_0410|M.avium_104 MFPAGKGGLLLGLLAPHGLLELTAVFLAGATGMRLGWSVISPGDRPRGQV *: ** *..::**: ****:******:*.. ******.** .*:*** *. MAB_0387|M.abscessus_ATCC_1997 LAEQGRAVMSVAGGLVAVLLVSGLIEALVTPSPLPTFARIGIGVSAEALF MSMEG_6221|M.smegmatis_MC2_155 LAEQGRAVVSVAIGLVVVLLVSGLVEALVTPSPLPTFMRIGIGVAVEVAF TH_1717|M.thermoresistible__bu LAEQGRAVMSVAIGLVAVLAVAGLIEALVTPSPLPTAVRIGIGIIAEAGF Mflv_1334|M.gilvum_PYR-GCK LAEQGRAVIAVAIGLVAVLLVAGVIEGFVTPSSLPTIVRVAIGVAAFGAF Mvan_5458|M.vanbaalenii_PYR-1 LAEQGRAVVAVAIGLAVVLMVAGAIEGFVTPSSLPTFVRVAIGVAAVVGF MMAR_5204|M.marinum_M LAEQGRGVVSVAVGLVGVLLVSGLIEAMVTPAPLPTFVRIAIGVMAEAAF MUL_4277|M.ulcerans_Agy99 LAEQGRGVVSVAVGLVGVLLVSGLIEAMVTPAPLPTFVRIAIGVMAEAAF Mb3719c|M.bovis_AF2122/97 LAEQGRGVVSVAVGLVGVFLVAGLIEAVVTPSPLPTFVRIAVGIIAEAVF Rv3694c|M.tuberculosis_H37Rv LAEQGRGVVSVAVGLVGVFLVAGLIEAVVTPSPLPTFVRIAVGIIAEAVF MAV_0410|M.avium_104 LAEQGRAVVSVAVGLVAVLLVSGLIEALVTPSPLPTFVRVGIGVVAEAAF ******.*::** **. *: *:* :*..***:.*** *:.:*: . * MAB_0387|M.abscessus_ATCC_1997 LAYVLILGRRGVAANESGDIENAPDYAPAA MSMEG_6221|M.smegmatis_MC2_155 LAYVVHFGRKAVRAGESGDIEDAPDYAPTA TH_1717|M.thermoresistible__bu LAYIVYFGRRAARAGESGDIADAPDVVPAG Mflv_1334|M.gilvum_PYR-GCK VGYVVYFGRRAVAAGETGDIEDAPDVVPTG Mvan_5458|M.vanbaalenii_PYR-1 FGYVFHFGRRAVRAGETGDVEDAPDVVPTG MMAR_5204|M.marinum_M LGYIVYFGRRAAKAGETGDIEDAPDVVPTG MUL_4277|M.ulcerans_Agy99 LGYIVYFGRRAAKAGETGDIEDAPDVVPTS Mb3719c|M.bovis_AF2122/97 LSYIGYFGRRAAQAGETGDMEDAPDVVPTG Rv3694c|M.tuberculosis_H37Rv LSYIGYFGRRAAQAGETGDMEDAPDVVPTG MAV_0410|M.avium_104 LCYIGYFGRRGVKAGESGDIEEAPDVVPTG . *: :**:.. *.*:**: :*** .*:.