For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
STGDRLGAPAGGPAGALPRRIVWQCRHNPKRELWLAWGTLVVFYNIFFVVFFLVTRTQPPPDPGWDDARV AQWFQDNHFGILAGFAVMFVITAMTTMSNALIAYSMRRMSISRAFAYSYLILYSLSAIPGMLLMCIALTV AAMRPGREPRLTHWIYDFAFLSFVGTMGVFLIGSLVWMLAILIDRNRVFPKWFGYLNLCNALTEIVVSPA WIFRGGVLAWNGQIAWWLDMVVFGIYTGVFIVLLRRMIQREDFGTGPLPDLPVREPAQR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_4697 | - | - | 100% (270) | hypothetical protein MMAR_4697 |
M. marinum M | MMAR_4698 | - | 5e-15 | 28.69% (237) | hypothetical protein MMAR_4698 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_1251 | - | 2e-44 | 37.84% (222) | hypothetical protein Mflv_1251 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2768 | - | 3e-20 | 28.77% (219) | hypothetical protein MAB_2768 |
M. avium 104 | MAV_0961 | - | 1e-105 | 70.16% (248) | hypothetical protein MAV_0961 |
M. smegmatis MC2 155 | MSMEG_6529 | - | 1e-41 | 35.89% (209) | hypothetical protein MSMEG_6529 |
M. thermoresistible (build 8) | TH_1789 | - | 8e-42 | 34.72% (216) | conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0818 | - | 3e-34 | 29.20% (226) | hypothetical protein Mvan_0818 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4697|M.marinum_M MSTGDRLGAPAGGPAGALPRRIVWQCRHNPKRELWLAWGTLVVFYNIFFV MAV_0961|M.avium_104 MLT------PAT-STGPLHQRIFWQLRHGPKRELWLAWTVLVVFYAAFFP MSMEG_6529|M.smegmatis_MC2_155 -----------MSTLTPEHPVGAEVKPRRGKPDVVLMTWFFPAWYAVFGV TH_1789|M.thermoresistible__bu -----------VSVLTPGRTGTAADRRPEGRPDVRLVTWFFPAWYLAFGV Mflv_1251|M.gilvum_PYR-GCK -----------MSLLSPARLRDATSLAPGGKRDVRLVTWFFPAWYAVFGV Mvan_0818|M.vanbaalenii_PYR-1 -------MNERVEVADNPAAGTSPSWRRHPKLDQWIAFWIVPGFFTLFGI MAB_2768|M.abscessus_ATCC_1997 ---------------------------MQNRMLERASAWSGLFYLLLFGT : : * MMAR_4697|M.marinum_M VFFLVTRTQPPPDPGWDDARVAQWFQDNHFGILAGFAVMFVITAMTTMSN MAV_0961|M.avium_104 MFFIVAQVQPPPQPTWDLATQAHWFSERRLGIPFGFGVIFAITGMTAVNN MSMEG_6529|M.smegmatis_MC2_155 IICLMARVTPPPRPDVTDADKVAFFVENGTTIRIGFCLLLILLGGAALTN TH_1789|M.thermoresistible__bu IICVMARVTPPPRPDVTAADKVSFFTTNGLTIQIGFVLLMILLGGAPITN Mflv_1251|M.gilvum_PYR-GCK IICILARVTPPPRPDVTAADKVAFFASNGLTIQIGFAVLLILLGGAAVTN Mvan_0818|M.vanbaalenii_PYR-1 VFVPLSFMMPPRSPGSSTPEIVGFMQS--HNLLIACAILTLSFGLAPITN MAB_2768|M.abscessus_ATCC_1997 GWLLVARFMPPIPPSAGPAQVASQFAQRHAWLMLAAVLMMCSTFALFPVS :: ** * . . : : . :: . MMAR_4697|M.marinum_M ALIAYSMRRMSISRAFAYSYLILYSLSAIPGMLLMCIALTVAAMRPGREP MAV_0961|M.avium_104 ALIAYSMRRMSVSRAFGYSYLVIYSLAAVPGMLLLCIALIVGTLRPERNR MSMEG_6529|M.smegmatis_MC2_155 GLVAYHVKRMSVGSVFAYAYIGGMGVGALPGFLLVAVCFLTATFRADRNP TH_1789|M.thermoresistible__bu GLVAYQIKRMSVGSVFAYGYIGGMGVGALPGFLLVAVCFLTATFRADRDP Mflv_1251|M.gilvum_PYR-GCK GLVAYQIMRMSVGSVFAYGYLGGMSVGALPGFLLVGVCFLTATFRADRDP Mvan_0818|M.vanbaalenii_PYR-1 ACYVMQVKRMSVSPVFRYTIIVGATTGAIVGMLFPMFCFGLGAFRTGYDP MAB_2768|M.abscessus_ATCC_1997 ALLVLIARRIERQVGMVTVMMGLTLATYLVMNFYTPFSFGIAAFRTERDP . . *:. : : : : ..: .::*. : MMAR_4697|M.marinum_M RLTHWIYDFAFLSFVGTMGVFLIGSLVWMLAILID---RNRVFPKWFGYL MAV_0961|M.avium_104 EVLGWLYDFAFLSFDGTMGVFLIGSLIWMVAILLD---KNRVFPKWFGYL MSMEG_6529|M.smegmatis_MC2_155 EQVSLLYDLGMLSYNGSLGCFSAAYLVLALAILYD---RNEIFPKWFAYV TH_1789|M.thermoresistible__bu EVVSMLYDLGMLSYNGSLGCFSAAYLVFAIAILYD---KNDIFPKWFAYV Mflv_1251|M.gilvum_PYR-GCK EMVSLLYDLGMLSYNGSLGCFTAAYLVLAVAILYD---KNEVFPKWFAYV Mvan_0818|M.vanbaalenii_PYR-1 PILAMLFDFGYLAYIGSLGCFCIMWMAFGLAILLD---RNNILPKWLGYY MAB_2768|M.abscessus_ATCC_1997 ALVQYASDYGFLQFMGGIPMFLMVWLLSAYAILVLSPRHDPVVPRWFGYL * . * : * : * : *** :: :.*:*:.* MMAR_4697|M.marinum_M NLCNALTEIVVSPAWIFRGGVLAWNGQIAWWLDMVVFGIYTGVFIVLLRR MAV_0961|M.avium_104 NLCNALTEVVVAPCWIFRRSVLAWDGQIAWWLDMVVFGIYQVTFIVMLFQ MSMEG_6529|M.smegmatis_MC2_155 SIWQIITEVIATQMFLFHAGPFAWNGSLAFWWAVVVFCVWLTALIVILKQ TH_1789|M.thermoresistible__bu TIWQIITEVIATQMFVFYSGPFAWNGSLAFWWSVVVFTVWLALLIMLLKR Mflv_1251|M.gilvum_PYR-GCK SIWQIITEVIATQMFVFYSGPFAWNGSVSFWLAVVVFSIWLGALIVLLRH Mvan_0818|M.vanbaalenii_PYR-1 TVWQYLTELMAAPVWIATSGPFAWDGLMTFWFAMALYVPWQIIVYLCIYR MAB_2768|M.abscessus_ATCC_1997 NLWIAILYLPELLVFFFHSGPFAWNGVVGFWIPAILFIVYFAISPVILIP .: : : :. . :**:* : :* :: : : : MMAR_4697|M.marinum_M MIQREDFGTGPLPDLPV-REPAQR------ MAV_0961|M.avium_104 MIRREDFGTGPLPDDPAPRERGVTS----- MSMEG_6529|M.smegmatis_MC2_155 AAERQALDEPALD----------------- TH_1789|M.thermoresistible__bu AAEREPADAPPLD----------------- Mflv_1251|M.gilvum_PYR-GCK ACVREPADAPAVG----------------- Mvan_0818|M.vanbaalenii_PYR-1 AIKNQPVHELENAQFVVASSLPATRPTAHA MAB_2768|M.abscessus_ATCC_1997 LVRKLIAESTETAVTPVRIS---------- .