For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_4550 (sucC)

annotation: succinyl-CoA synthetase (beta chain) SucC
coordinates: 5581980 - 5583143
length: 387

DLFEYQAKELFAKHNVPTTPGRVTDTAEGARAIATEIGHPVMVKAQVKIGGRGKAGGVKYAATPDDAYEH
ANNILGLDIKGHVVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLAKVPV
DAAKGVDLAFARSIAEQGHLPAEVLDAAAVTISKLWDLFVGEDATLVEVNPLVRTPDDQILALDGKVTLD
ANADFRHPDHVEFEDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPA
NFLDIGGGASAEVMAAGLDVVLGDSQVKSVFVNVFGGITSCDAVATGIVKALEILGAEANKPLVVRLDGN
NVEEGRRILTDANHPLVTLVPTMDEAADKAAELASA*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_4550sucC-100% (387)succinyl-CoA synthetase (beta chain) SucC

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0976sucC0.092.25% (387) succinyl-CoA synthetase subunit beta
M. gilvum PYR-GCKMflv_1865sucC0.089.38% (386) succinyl-CoA synthetase subunit beta
M. tuberculosis H37RvRv0951sucC0.092.51% (387) succinyl-CoA synthetase subunit beta
M. leprae Br4923MLBr_00155sucC0.084.91% (391) succinyl-CoA synthetase subunit beta
M. abscessus ATCC 19977MAB_1056sucC0.084.75% (387) succinyl-CoA synthetase subunit beta
M. avium 104MAV_1074sucC0.089.38% (386) succinyl-CoA synthetase subunit beta
M. smegmatis MC2 155MSMEG_5525sucC0.089.64% (386) succinyl-CoA synthetase subunit beta
M. thermoresistible (build 8)TH_1773sucC0.088.08% (386) PROBABLE SUCCINYL-CoA SYNTHETASE (BETA CHAIN) SUCC
M. ulcerans Agy99MUL_4720sucC0.099.74% (387) succinyl-CoA synthetase subunit beta
M. vanbaalenii PYR-1Mvan_4870sucC0.089.12% (386) succinyl-CoA synthetase subunit beta

CLUSTAL 2.0.9 multiple sequence alignment


Mb0976|M.bovis_AF2122/97            MDLFEYQAKELFAKHNVPSTPGRVTDTAEGAKAIATEIGRPVMVKAQVKI
Rv0951|M.tuberculosis_H37Rv         MDLFEYQAKELFAKHNVPSTPGRVTDTAEGAKAIATEIGRPVMVKAQVKI
MMAR_4550|M.marinum_M               MDLFEYQAKELFAKHNVPTTPGRVTDTAEGARAIATEIGHPVMVKAQVKI
MUL_4720|M.ulcerans_Agy99           MDLFEYQAKGLFAKHNVPTTPGRVTDTAEGARAIATEIGHPVMVKAQVKI
Mflv_1865|M.gilvum_PYR-GCK          MDLFEYQAKELFAKHNVPTTPGRVTDSAEDAKAIATEIGKPVMVKAQVKV
Mvan_4870|M.vanbaalenii_PYR-1       MDLFEYQAKELFAKHNVPTTPGRVTESAEDAKAIAEEIGKPVMVKAQVKV
TH_1773|M.thermoresistible__bu      MDLFEYQAKELFAKHNVPTTPGRVTTTAEDAKAIATEIGKPVMVKAQVKT
MAB_1056|M.abscessus_ATCC_1997      MDLFEYQAKELFAKHNVPTTPGRVTTTAEDAKAIAEEIGKPVMIKAQVKV
MSMEG_5525|M.smegmatis_MC2_155      MDLFEYQAKELFAKHNVPTSPGRVTDSAEDAKTIAEEIGRPVMVKAQVKT
MAV_1074|M.avium_104                MDLFEYQAKELFAKHNVPTTPGRVTDTAEGARDIAAEIGRPVMVKAQVKT
MLBr_00155|M.leprae_Br4923          MDLFEYQAKELFAKHGVPGIQGRVTDSAEGAKTIAMEIGRPVMVKAQVKT
                                    ********* *****.**   **** :**.*: ** ***:***:***** 

Mb0976|M.bovis_AF2122/97            GGRGKAGGVKYAATPQDAYEHAKNILGLDIKGHIVKKLLVAEASDIAEEY
Rv0951|M.tuberculosis_H37Rv         GGRGKAGGVKYAATPQDAYEHAKNILGLDIKGHIVKKLLVAEASDIAEEY
MMAR_4550|M.marinum_M               GGRGKAGGVKYAATPDDAYEHANNILGLDIKGHVVKKLLVAEASDIAEEY
MUL_4720|M.ulcerans_Agy99           GGRGKAGGVKYAATPDDAYEHANNILGLDIKGHVVKKLLVAEASDIAEEY
Mflv_1865|M.gilvum_PYR-GCK          GGRGKAGGVKYAATPDDAFTHAQNILGLDIKGHVVKKLLVAEASDIAEEY
Mvan_4870|M.vanbaalenii_PYR-1       GGRGKAGGVKYAATPEDALTHAQNILGLDIKGHIVKKLLVAEASDIAEEY
TH_1773|M.thermoresistible__bu      GGRGKAGGVKYAATPDDAFTHAQNILGLDIKGHIVKKLLVSEASDIAEEY
MAB_1056|M.abscessus_ATCC_1997      GGRGKAGGVKYAATPDDALTHAQNILGLDIKGHIVKKILVAEASDIAEEY
MSMEG_5525|M.smegmatis_MC2_155      GGRGKAGGVKYAATPDDAFTHANNILGLDIKGHVVKKLLVAEASDIAEEY
MAV_1074|M.avium_104                GGRGKAGGVKYAATPEDAYTHAKNILGLDIKGHVVKKLLVSEASDIAEEY
MLBr_00155|M.leprae_Br4923          GGRGKAGGVKYAATPEEAYQQAKNILGLDIKGHIVKKLLVVEASDIAEEY
                                    ***************::*  :*:**********:***:** *********

Mb0976|M.bovis_AF2122/97            YLSFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLD
Rv0951|M.tuberculosis_H37Rv         YLSFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLD
MMAR_4550|M.marinum_M               YISFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVDAAKGVDLA
MUL_4720|M.ulcerans_Agy99           YISFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVDAAKGVDLA
Mflv_1865|M.gilvum_PYR-GCK          YISFLLDRSNRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVNAVKGVDLA
Mvan_4870|M.vanbaalenii_PYR-1       YISFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDEA
TH_1773|M.thermoresistible__bu      YISFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVDPTVGVDVA
MAB_1056|M.abscessus_ATCC_1997      YISFLLDRANRTYLAMCSVEGGVEIEVTAEENPDALAKVPVDAVKGVDLA
MSMEG_5525|M.smegmatis_MC2_155      YISFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDLA
MAV_1074|M.avium_104                YISFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVTGVDLA
MLBr_00155|M.leprae_Br4923          YLSFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVSVDAVKGVDLA
                                    *:******:*************:*** .*  :*: ****.*:.. ***  

Mb0976|M.bovis_AF2122/97            FARSIAEQGHLPAEVLDTAAVTIAKLWELFVAEDATLVEVNPLVRTPD--
Rv0951|M.tuberculosis_H37Rv         FARSIAEQGHLPAEVLDTAAVTIAKLWELFVAEDATLVEVNPLVRTPD--
MMAR_4550|M.marinum_M               FARSIAEQGHLPAEVLDAAAVTISKLWDLFVGEDATLVEVNPLVRTPD--
MUL_4720|M.ulcerans_Agy99           FARSIAEQGHLPAEVLDAAAVTISKLWDLFVGEDATLVEVNPLVRTPD--
Mflv_1865|M.gilvum_PYR-GCK          FAREIAEKGHLPAEVLDAAAVTIQKLWEVFTKEDATLVEVNPLVRTPD--
Mvan_4870|M.vanbaalenii_PYR-1       FAREIAEKGHLPAEVLDAAAVTIAKLWEVFVKEDATLVEVNPLVRTPD--
TH_1773|M.thermoresistible__bu      FAREIAQKGHLPGEVLDSAAVTIAKLWEVFVKEDATLVEVNPLVRTPD--
MAB_1056|M.abscessus_ATCC_1997      LAREIAEKGKLPAEVLDSAAVTIQKLWEVFVGEDATLVEVNPLVRTPD--
MSMEG_5525|M.smegmatis_MC2_155      FARSIAEQGHLPAEVLDAAAVTIQKLWEVFVKEDATLVEVNPLVRTPD--
MAV_1074|M.avium_104                TARSIAEKGHLPAEVLDAAAVTINKLWELFVAEDATLVEVNPLVRTPD--
MLBr_00155|M.leprae_Br4923          CARSIAQQGHLPAEVLDAAAATIAKLWELFVAEDATLVEVNPLVRTPSRG
                                     **.**::*:**.****:**.** ***::*. ***************.  

Mb0976|M.bovis_AF2122/97            ----HKILALDAKITLDGNADFRQPGHAEFEDRAATDPLELKAKEHDLNY
Rv0951|M.tuberculosis_H37Rv         ----HKILALDAKITLDGNADFRQPGHAEFEDRAATDPLELKAKEHDLNY
MMAR_4550|M.marinum_M               ----DQILALDGKVTLDANADFRHPDHVEFEDRAATDPLELKAKEHDLNY
MUL_4720|M.ulcerans_Agy99           ----DQILALDGKVTLDANADFRHPDHVEFEDRAATDPLELKAKEHDLNY
Mflv_1865|M.gilvum_PYR-GCK          ----DQILALDGKVTLDANADFRQEGHKEFEDKDATDPLELKAKENDLNY
Mvan_4870|M.vanbaalenii_PYR-1       ----DQILALDGKVTLDANADFRQPGHAEFEDKDATDPLELKAKENDLNY
TH_1773|M.thermoresistible__bu      ----DQILALDGKVTLDDNAAFRQPHHAEFEDRDATDPLELKAKEHDLNY
MAB_1056|M.abscessus_ATCC_1997      ----NQILALDGKVTLDGNADFRQPGHAEFEDKDATDPLELKAKEHDLNY
MSMEG_5525|M.smegmatis_MC2_155      ----DQILALDGKVTLDENAGFRQPGHAEFEDRDATDPLELKAKENDLNY
MAV_1074|M.avium_104                ----NQILALDGKVTLDANADFRQPGHAAFEDRDATDPLELKAKEHDLNY
MLBr_00155|M.leprae_Br4923          YGSSGKILALDGKVTLDANARFRQPGHAEFEDRAATDPLEWKAKQHNLNY
                                         :*****.*:*** ** **:  *  ***: ****** ***:::***

Mb0976|M.bovis_AF2122/97            VKLDGQVGIIGNGAGLAMSTLDVVAYAGEKHGGVKPANFLDIGGGASAEV
Rv0951|M.tuberculosis_H37Rv         VKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPANFLDIGGGASAEV
MMAR_4550|M.marinum_M               VKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPANFLDIGGGASAEV
MUL_4720|M.ulcerans_Agy99           VKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPANFLDIGGGASAEV
Mflv_1865|M.gilvum_PYR-GCK          VKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPANFLDIGGGASAEV
Mvan_4870|M.vanbaalenii_PYR-1       VKLDGAVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPANFLDIGGGASAEV
TH_1773|M.thermoresistible__bu      VKLDGEVGIIGNGAGLVMSTLDVTAYAGEKHGGVKPANFLDIGGGASAEV
MAB_1056|M.abscessus_ATCC_1997      VKLDGQVGIIGNGAGLVMSTLDVVAYAGENHNGVKPANFLDIGGGASAEV
MSMEG_5525|M.smegmatis_MC2_155      VKLDGQVGIIGNGAGLVMSTLDVVAYAGENHGGVKPANFLDIGGGASAAV
MAV_1074|M.avium_104                VKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPANFLDIGGGASAEV
MLBr_00155|M.leprae_Br4923          IKLDGEVGIIGNGAGLTMSTFDVVAYAGEQHGGVKPANFLDIGGGASAEV
                                    :**** **********.***:**.*****:*.**************** *

Mb0976|M.bovis_AF2122/97            MAAGLDVVLGDQQVKSVFVNVFGGITSCDAVATGIVKALGMLGDEANKPL
Rv0951|M.tuberculosis_H37Rv         MAAGLDVVLGDQQVKSVFVNVFGGITSCDAVATGIVKALGMLGDEANKPL
MMAR_4550|M.marinum_M               MAAGLDVVLGDSQVKSVFVNVFGGITSCDAVATGIVKALEILGAEANKPL
MUL_4720|M.ulcerans_Agy99           MAAGLDVVLGDSQVKSVFVNVFGGITSCDAVATGIVKALEILGAEANKPL
Mflv_1865|M.gilvum_PYR-GCK          MANGLDVILNDSQVKSVFVNVFGGITSCDAVANGIVKALEILGDEANKPL
Mvan_4870|M.vanbaalenii_PYR-1       MAAGLDVILNDSQVKSVFVNVFGGITACDAVANGIVKALEILGDEANKPL
TH_1773|M.thermoresistible__bu      MAAGLDVILNDPQVKSVFVNVFGGITACDAVATGIVKALQILGDEANKPL
MAB_1056|M.abscessus_ATCC_1997      MAAGLDVILGDSQVKSVFVNVFGGITACDAVANGIVGALKTLGNTASKPL
MSMEG_5525|M.smegmatis_MC2_155      MAAGLDVILGDSQVKSVFVNVFGGITACDAVANGIVQALQILGDEANKPL
MAV_1074|M.avium_104                MAAGLDVILHDKQVKSVFVNVFGGITSCDAVANGIVTALNMLGDEANKPL
MLBr_00155|M.leprae_Br4923          MAASLDVVLGDVQVKSVFVNIFGGITTCDTVATGIVKALEILGDEANKPL
                                    ** .***:* * ********:*****:**:**.*** **  **  *.***

Mb0976|M.bovis_AF2122/97            VVRLDGNNVEEGRRILTEANHPLVTLVATMDEAADKAAELASA--
Rv0951|M.tuberculosis_H37Rv         VVRLDGNNVEEGRRILTEANHPLVTLVATMDEAADKAAELASA--
MMAR_4550|M.marinum_M               VVRLDGNNVEEGRRILTDANHPLVTLVPTMDEAADKAAELASA--
MUL_4720|M.ulcerans_Agy99           VVRLDGNNVEEGRRILTDANHPLVTLVPTMDEAADKAAELASA--
Mflv_1865|M.gilvum_PYR-GCK          VVRLDGNNVDEGRRILAEANHPLVVQAETMDSGADKAAELANK--
Mvan_4870|M.vanbaalenii_PYR-1       VVRLDGNNVEEGRRILSEANHPLVIQADTMDSGADKAAELANK--
TH_1773|M.thermoresistible__bu      VVRLDGNNVEEGRRILAEANHPLVIQADTMDAGADKAAELANK--
MAB_1056|M.abscessus_ATCC_1997      VVRLDGNKVEEGRAILAEFNHPLVIQAETMDAGADKAAALAAASN
MSMEG_5525|M.smegmatis_MC2_155      VVRLDGNNVEEGRRILAEANHPLVIQAETMDAGADKAAELANK--
MAV_1074|M.avium_104                VVRLDGNNVDQGRRILAEANHPLVIQAETMDSGADKAAELANK--
MLBr_00155|M.leprae_Br4923          VVRLDGNNVGEGRRILAEANHPLVMLVPTMDEAANKAAELART--
                                    *******:* :** **:: *****  . *** .*:*** **