For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_3879 (-)

annotation: hypothetical protein MMAR_3879
coordinates: 4816364 - 4817587
length: 407

SYGLPTGTNINYGQPGFPDWVYQLGAAFNLRASTYPGHQESDRVEAGYARNPNRQNRGIDWAGAVPDMDR
FAEYLLSTRGSLEQVIWQNPATGARIGVAGGKDVTQTAYYAADYSGHTDHVHTRQSEAIPMPDAPPKDTL
FADVSEWQVPVDDSYPYPVLSIRVSDGSYQDRNFARNYTWMRAALNSGKLTFGIVYTYVRPQTWQSNAAT
VKQMIDAAGGLHPRIALMLDIESGGNPPGDQSGGINAIYSALADYTGDPARIIGYGNVSDLNGMWRTKPP
GIRLIVAGYGRLPTYPGMVAHQYTDGQGYGGGLPEGCPPFGNCDMNAANGLTPAEFAAACGISGDLQPEP
DPEPGPPPAPAGPVPVGPADDQLTLRWPCLGDQTLVEAVAEIRDAVLGTNDRKRGW*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_3879--100% (407)hypothetical protein MMAR_3879
M. marinum MMMAR_1371-3e-0529.82% (114) transmembrane protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3792-3e-6456.33% (229) hypothetical protein Mb3792
M. gilvum PYR-GCK-----
M. tuberculosis H37RvRv3766-3e-6456.33% (229) hypothetical protein Rv3766
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. avium 104-----
M. smegmatis MC2 155-----
M. thermoresistible (build 8)-----
M. ulcerans Agy99MUL_2505-2e-0529.82% (114) hypothetical protein MUL_2505
M. vanbaalenii PYR-1Mvan_4360-2e-3249.66% (147) Phage-related minor tail protein-like

CLUSTAL 2.0.9 multiple sequence alignment


Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              --------------------------------------------------
Mvan_4360|M.vanbaalenii_PYR-1      MVTMVVGTEIDDNSLRQSANDIQRRFDRLGQNVGGDFMTQFADGAAANAP
MUL_2505|M.ulcerans_Agy99          -----------MGMRPTARMPKLTRRSRVLILIALGVIALLLAGPRLIDA
                                                                                     

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              --------------------------------------------------
Mvan_4360|M.vanbaalenii_PYR-1      KVQKAVDKAADATGRLRSEQEKLDALTANGASRDRIVTQSEKVAKARRDE
MUL_2505|M.ulcerans_Agy99          YVDWLWFGELGYLSVFTTVLVTRFLVFLVAGVLVGGIVFAGLALAYRTRP
                                                                                     

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              --------------MSYGLPTGTNINYGQPGFPDWVYQLGAAFNLRAS-T
Mvan_4360|M.vanbaalenii_PYR-1      ARAYREATAAVEDYDRAGQRAGNSFTSGLRSGEAGAAEAGGGFADSFAGG
MUL_2505|M.ulcerans_Agy99          VFVPNNDNDPVARYRTVVLARLRLFGIGIPAAIGLLAGIVAQSYWVRIQL
                                                                                     

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              YPGHQESDRVEAGYARNPNRQNRGIDWAGAVPDMDRFAEYLLSTRGSLEQ
Mvan_4360|M.vanbaalenii_PYR-1      FAGASSLSGLGGGLLKAGGWITAGIAAGKLFSDAVGDGMATIQLRDQFQA
MUL_2505|M.ulcerans_Agy99          FLHGGDFGITDPQFGKDLGFYAFELPFYRLLLSYLFVAIFLAFVANVVSH
                                                                                     

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              VIWQNPATGARIGVAGGKDVTQTAYYAADYSGHTDHVHTRQSEAIPMPDA
Mvan_4360|M.vanbaalenii_PYR-1      RMGLDDSAMAEFGDAAGRAYANNFGLSLEDTLSTSQAALRTKLVDPDATA
MUL_2505|M.ulcerans_Agy99          YLFGGIRLTGRSGALSRSARIQLVSLVGVLVLLKTVAYWLNRYELLSHTR
                                                                                     

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              PPKDTLFADVSEWQVPVDDSYPYPVLSIRVSDGSYQDRNFARN-------
Mvan_4360|M.vanbaalenii_PYR-1      AEVQAVIEQLEGMEAVTEATATELSRSMATLMRTGLADSMSEA-------
MUL_2505|M.ulcerans_Agy99          GGKPFTGAGYTDINAVLPAKLILMAIAVICAAAVFSAIVLRDLRIPAIGL
                                                                                     

Mb3792|M.bovis_AF2122/97           ---MRSAFDSGR---------------------LTFGIVYTYARPN-WWA
Rv3766|M.tuberculosis_H37Rv        ---MRSAFDSGR---------------------LTFGIVYTYARPN-WWA
MMAR_3879|M.marinum_M              YTWMRAALNSGK---------------------LTFGIVYTYVRPQTWQS
Mvan_4360|M.vanbaalenii_PYR-1      SDIITAGFQSGLDVSGDWLDTINEYSTQFRKFGLDAGEFMTLLSQG-LEG
MUL_2505|M.ulcerans_Agy99          VLLLLSSLIVGAAWPMIVEQISVKPNAAQKESEYISRSITATRQAYGLTS
                                      : :.:  *                           . :        .

Mb3792|M.bovis_AF2122/97           NANTVRSMID----------------------------------AAGGLH
Rv3766|M.tuberculosis_H37Rv        NANTVRSMID----------------------------------AAGGLH
MMAR_3879|M.marinum_M              NAATVKQMID----------------------------------AAGGLH
Mvan_4360|M.vanbaalenii_PYR-1      GARDTDKVADSLKEFSIRAVDGSQSTAEAFAALGFSADEMGRMFAQGGDS
MUL_2505|M.ulcerans_Agy99          NVVTYRNYTGD---------------------------------GEATAQ
                                   ..    .  .                                  . .   

Mb3792|M.bovis_AF2122/97           PRVALMLDVESGG--NPPGDGSSWINRLYWNLADYAGSPVR---------
Rv3766|M.tuberculosis_H37Rv        PRVALMLDVESGG--NPPGDGSSWINRLYWNLADYAGSPVR---------
MMAR_3879|M.marinum_M              PRIALMLDIESGG--NPPGDQSGGINAIYSALADYTGDPAR---------
Mvan_4360|M.vanbaalenii_PYR-1      AKVALDATFDAIKRIDDPMQQSLIWQQLFGTQFEDMGDAINRFDLDPVKN
MUL_2505|M.ulcerans_Agy99          QVAADRATTSNIRLLDPTIVSPAFTQFQQGKNFYYFPDQLSIDRYFDRNN
                                      *     .     : .   .   :           .            

Mb3792|M.bovis_AF2122/97           ----IIGYAN------AYDFFNMWRVRPAGL----------RVIGAGYGS
Rv3766|M.tuberculosis_H37Rv        ----IIGYAN------AYDFFNMWRVRPAGL----------RVIGAGYGS
MMAR_3879|M.marinum_M              ----IIGYGN------VSDLNGMWRTKPPGI----------RLIVAGYGR
Mvan_4360|M.vanbaalenii_PYR-1      QFADIEGVAARSTQTATDNFSSKWGTATRTVGQ--YFSDLKTDIAAWFSG
MUL_2505|M.ulcerans_Agy99          NLRDYVVAARELNPDRLIDNQRDWINRHTVYTHGNGFIASPANTVRGIAN
                                           .         :    *                        . 

Mb3792|M.bovis_AF2122/97           NPNLPGQVAHQYTDGSG-----YSPNLPQGAPP-----------------
Rv3766|M.tuberculosis_H37Rv        NPNLPGQVAHQYTDGSG-----YSPNLPQGAPP-----------------
MMAR_3879|M.marinum_M              LPTYPGMVAHQYTDGQG-----YGGGLPEGCPP-----------------
Mvan_4360|M.vanbaalenii_PYR-1      LPIVSDVLPEMLTTLFGDQPRLQAPGAIQGAVPGTPLNPLDIAAGGTGGW
MUL_2505|M.ulcerans_Agy99          DPNQNGGYPEFLVNVVG----ANGTVVSDGPAPLD---------------
                                    *   .  ..  .   *      .    :*  *                 

Mb3792|M.bovis_AF2122/97           FGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELLTKVREI-W
Rv3766|M.tuberculosis_H37Rv        FGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELLTKVREI-W
MMAR_3879|M.marinum_M              FGNCDMNAANGLTPAEFAAACGIS---GDLQPEPDPEPGPPPAPAGPVPV
Mvan_4360|M.vanbaalenii_PYR-1      WGTSNVPQAETGVPGVVLPPDAASTPLGELLLPSQQGPTPPTGPVAPRPT
MUL_2505|M.ulcerans_Agy99          QPRIYYGPVISNTPADYAIVGKTGADREYDYETSADTKNYTYTGSGGVSV
                                           .   .*                   .                

Mb3792|M.bovis_AF2122/97           DQLRG---------------------------------------PNGAGW
Rv3766|M.tuberculosis_H37Rv        DQLRG---------------------------------------PNGAGW
MMAR_3879|M.marinum_M              GPADD---------------------------------------QLTLRW
Mvan_4360|M.vanbaalenii_PYR-1      APTQGTPVPIVPDGADAGSGDKPVIDPSRYSLDSVPISIRPDQLPGVASS
MUL_2505|M.ulcerans_Agy99          GSWIS---------------------------------------RTVFAA
                                       .                                             

Mb3792|M.bovis_AF2122/97           PQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE-------------------
Rv3766|M.tuberculosis_H37Rv        PQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE-------------------
MMAR_3879|M.marinum_M              PCLG------DQTLVEAVAEIRDAVLGTNDRKRGW---------------
Mvan_4360|M.vanbaalenii_PYR-1      PSMSQQVWDMETQLLSQRQSVEEARLRVLELEAGGTATQSEINAARTAQQ
MUL_2505|M.ulcerans_Agy99          KFAERNFLFSNVIGSNSKILFNRDPAQRVEAVAPWLTTDSAVYPAIVNKR
                                             :    .    ..                            

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              --------------------------------------------------
Mvan_4360|M.vanbaalenii_PYR-1      IAERQY-VSQLQKLAEAQQGTWQKLEDSAASFASGMEDIGAALDSDFGLS
MUL_2505|M.ulcerans_Agy99          MVWILDGYTTLDNYPYSQLTSLSSATADSNEVAFNRLLPDKQVSYIRNSV
                                                                                     

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              --------------------------------------------------
Mvan_4360|M.vanbaalenii_PYR-1      EGLPGLAENLTKFIANLAAAPLLGQLSAIKQAAGDEGSGLMGILASNGAF
MUL_2505|M.ulcerans_Agy99          KATVDAYDGTVTLYQQDEQDPVLKAWMQVFPGTVKPKGDISPELAAHLRY
                                                                                     

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              --------------------------------------------------
Mvan_4360|M.vanbaalenii_PYR-1      GPRFMPNNNGIGAPGYSPSTMGPAELQQAMTYGVTGGGAPYGLPAGSGSG
MUL_2505|M.ulcerans_Agy99          PEDLFKVQRMLLAKYHVNDPVTFFSTSDFWDVPLD--------PNPTASS
                                                                                     

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              --------------------------------------------------
Mvan_4360|M.vanbaalenii_PYR-1      AQFPAWVRQLERIFGVSASTYAGHQERDGLNKGIDWSGPVENMQRFADYL
MUL_2505|M.ulcerans_Agy99          YQPPYYIVAKNIAKNDNSASYQLISAMNRFKRDYLAAYISASSDPATYGK
                                                                                     

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              --------------------------------------------------
Mvan_4360|M.vanbaalenii_PYR-1      ATIPGSLEQVIWQNPNTGGKTGIADGQFVGPGTSQPGYYANDWGGHQDHV
MUL_2505|M.ulcerans_Agy99          ITVLTIPGQVNGPKLANNAITTDPAVSQDLGVIGRDNQNRIRWGNLLTLP
                                                                                     

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              --------------------------------------------------
Mvan_4360|M.vanbaalenii_PYR-1      HTRQSYSLPVPAAPAVPPVPSYPQYQPSTGVAPAPAPVLPSAPVNAGPLP
MUL_2505|M.ulcerans_Agy99          VGQGGLLYVEPVYASPGASDAASSYPRLIRVAMMYNDKIGYGPTVRDALN
                                                                                     

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              --------------------------------------------------
Mvan_4360|M.vanbaalenii_PYR-1      PLPAPGTVPSGGSAMPGTGFPQAPAFMAPPGTPGNPIGQSVIPGQPPGVV
MUL_2505|M.ulcerans_Agy99          GLFGPGAGDAATGIQPTEGGAPANVPPNNAPSPEALPGTPPSPPTAVPPA
                                                                                     

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              --------------------------------------------------
Mvan_4360|M.vanbaalenii_PYR-1      PGAGAGMTGGISGIPLAAASAAASSLDFLAPGAGAAANLGIQLANRTIGF
MUL_2505|M.ulcerans_Agy99          PEASVTLSPARAAAMKEIQSAIGAARDAQKKGDFAAYGAALQRLDDAITK
                                                                                     

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              --------------------------------------------------
Mvan_4360|M.vanbaalenii_PYR-1      VGQQVGNLWSGVAETFTLSGSGGAPDFMKSLPGRALAGIAGARPSMPNTA
MUL_2505|M.ulcerans_Agy99          FNNTQ---------------------------------------------
                                                                                     

Mb3792|M.bovis_AF2122/97           --------------------------------------------------
Rv3766|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_3879|M.marinum_M              --------------------------------------------------
Mvan_4360|M.vanbaalenii_PYR-1      GGGGQQPQADPRQQQGQQQGPNSGPMVEISGDIYQQPGQEPTSVANEISS
MUL_2505|M.ulcerans_Agy99          --------------------------------------------------
                                                                                     

Mb3792|M.bovis_AF2122/97           -----------------
Rv3766|M.tuberculosis_H37Rv        -----------------
MMAR_3879|M.marinum_M              -----------------
Mvan_4360|M.vanbaalenii_PYR-1      QVRAAEFSSGWMNARGI
MUL_2505|M.ulcerans_Agy99          -----------------