For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRCGPPHQDDDDRAHQGDGVLAADESAYRPVATPPPLDRVRAGGEVVITDLTESELAEAERDWEDFWAAT RPVEHTTTVEHHADHLARAHALRGAQAVHLASALAVGAPGLIIAAWDRRLHTGAQAPRCRVAPRPTRPLA HRPDIGVTQPQHGRRSGTDSPGLDPCRSSGSRQFRFATTEPNKSRQAR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_3183 | - | - | 100% (188) | hypothetical protein MMAR_3183 |
M. marinum M | MMAR_3166 | - | 2e-35 | 77.53% (89) | hypothetical protein MMAR_3166 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3206c | - | 1e-37 | 80.90% (89) | hypothetical protein Mb3206c |
M. gilvum PYR-GCK | Mflv_3018 | - | 5e-38 | 82.02% (89) | hypothetical protein Mflv_3018 |
M. tuberculosis H37Rv | Rv3180c | - | 1e-37 | 80.90% (89) | hypothetical protein Rv3180c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_3491 | - | 3e-44 | 92.13% (89) | hypothetical protein MUL_3491 |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mb3206c|M.bovis_AF2122/97 MPLVYFDASAFVKLLTTETGSSLASALWDGCDAALSSRLAYPEVRAALAA Rv3180c|M.tuberculosis_H37Rv MPLVYFDASAFVKLLTTETGSSLASALWDGCDAALSSRLAYPEVRAALAA Mflv_3018|M.gilvum_PYR-GCK MPLVYFDASAFVKLLTTETGSSVAAALWDGCDAALSSRLAYPEVRAALAA MUL_3491|M.ulcerans_Agy99 MPLVYFDASAFVKLLTTETGGSLASVPWDGCDAALSARLAYPEVRAALAA MMAR_3183|M.marinum_M ---MRCGPPHQDDDDRAHQGDGVLAAD-ESAYRPVATPPPLDRVRAGGEV : ... . :. *..: :. :.. .::: . .***. . Mb3206c|M.bovis_AF2122/97 AARNHDLTESELADAERDWEDFWAATRPVELTATVEQHAGHLARAHALRG Rv3180c|M.tuberculosis_H37Rv AARNHDLTESELADAERDWEDFWAATRPVELTATVEQHAGHLARAHALRG Mflv_3018|M.gilvum_PYR-GCK AARNHDLTESELAEAERDWEDFWAATRPIELTATVEQHAGHLARAHALRG MUL_3491|M.ulcerans_Agy99 AARNHDLTESELAEAERDWEDFWTATRPVEHTTTVEHHADHLARAHALRG MMAR_3183|M.marinum_M VIT--DLTESELAEAERDWEDFWAATRPVEHTTTVEHHADHLARAHALRG . ********:*********:****:* *:***:**.********** Mb3206c|M.bovis_AF2122/97 ADAVHLASALAVGDPGLVVAVWDRRLHTGAHAAGCRVAP----------- Rv3180c|M.tuberculosis_H37Rv ADAVHLASALAVGDPGLVVAVWDRRLHTGAHAAGCRVAP----------- Mflv_3018|M.gilvum_PYR-GCK ADAVHLASALAVGDPGLIVAVWDRRLHTGARAAGCRVAP----------- MUL_3491|M.ulcerans_Agy99 AQAVHMASALAVGAPGLIIAAWDRRLHTGAQAARCRVAP----------- MMAR_3183|M.marinum_M AQAVHLASALAVGAPGLIIAAWDRRLHTGAQAPRCRVAPRPTRPLAHRPD *:***:******* ***::*.*********:*. ***** Mb3206c|M.bovis_AF2122/97 ----------------AQLDP----------------------- Rv3180c|M.tuberculosis_H37Rv ----------------AQLDP----------------------- Mflv_3018|M.gilvum_PYR-GCK ----------------AQLDP----------------------- MUL_3491|M.ulcerans_Agy99 ----------------AQLDP----------------------- MMAR_3183|M.marinum_M IGVTQPQHGRRSGTDSPGLDPCRSSGSRQFRFATTEPNKSRQAR . ***