For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SGENSPYLEPTEFLDWQHESVRDFVASATRGAVDDTTKAIAIFTAVRDSIWYDPYTVTDDPHAYRASTIA TADRAYCVPKAVLLTAACRAAGIPARLGFADVRNHLQTETLRERMGGTDVFVYHGYSLMHLCGVWVKATP AFNRELCARFGVPPIDFDGRTDALLHGFAGDGTQHMEYLRDRGAFDDLPLAEILQALRTHYGTLIGDASR HPDLFA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_3134 | - | - | 100% (217) | hypothetical protein MMAR_3134 |
M. marinum M | MMAR_2558 | - | 5e-17 | 32.51% (203) | hypothetical protein MMAR_2558 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0814c | - | 4e-15 | 32.47% (194) | hypothetical protein Mb0814c |
M. gilvum PYR-GCK | Mflv_4586 | - | 4e-77 | 64.32% (213) | hypothetical protein Mflv_4586 |
M. tuberculosis H37Rv | Rv0790c | - | 4e-15 | 32.47% (194) | hypothetical protein Rv0790c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2079 | - | 1e-107 | 83.87% (217) | hypothetical protein MAB_2079 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_3203 | - | 1e-16 | 32.02% (203) | hypothetical protein MUL_3203 |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3134|M.marinum_M ----MSGE--NSPYLEPTEFLDWQHESVRDFVASATRGAVDDTTKAIAIF MAB_2079|M.abscessus_ATCC_1997 ----MTVD--HSPYLEPTEFLDWQQDSVRDFVSSAIRGACGDSEKAIAIF Mflv_4586|M.gilvum_PYR-GCK ----MSEIPSDSTFLETSEFLDWQHDDVQRFTDEAVGDARAPVEKARLIF Mb0814c|M.bovis_AF2122/97 -MTLANNGTGMDHFLTPTEYLDAGHPLVRTTAATLIRDAVSDTERVRRIY Rv0790c|M.tuberculosis_H37Rv -MTLANNGTGMDHFLTPTEYLDAGHPLVRTTAATLIRDAVSDTERVRRIY MUL_3203|M.ulcerans_Agy99 MHAKSGRNTGAGPYLESTEYLDADHPVVAELAARLTRGAGSDVKRIRAIY . :* .:*:** : * . .* : *: MMAR_3134|M.marinum_M TAVRDSIWYDPYTVTDDPH-AYRASTIATADRAYCVPKAVLLTAACRAAG MAB_2079|M.abscessus_ATCC_1997 TAVRDSIWYDPYTVTDNPH-AYRASTVATAERAYCVPKAVLLTAACRAAG Mflv_4586|M.gilvum_PYR-GCK AAVRDRIWYDPYSTDDDPE-HYRASYVATASKAYCVPKAVLLTAAARAAG Mb0814c|M.bovis_AF2122/97 YYVRDVPYDVLASFRYLAQGHHRASDVIGHGVAFCMGKASSFVALCRAAG Rv0790c|M.tuberculosis_H37Rv YYVRDVPYDVLASFRYLAQGHHRASDVIGHGVAFCMGKASSFVALCRAAG MUL_3203|M.ulcerans_Agy99 LYVRDLPYAIAESFRYLAAGERTVRAVLTHGVAFCMGKASSFVALSRAAG *** : : . . : *:*: ** :.* .**** MMAR_3134|M.marinum_M IPARLGFADVR---NHLQTETLRERMGGT--DVFVYHGYSLMHLCGVWVK MAB_2079|M.abscessus_ATCC_1997 IPARLGFADVR---NHLQTKALRERMGGS--DVFVYHGYSLMFLNGAWVK Mflv_4586|M.gilvum_PYR-GCK IPARLGFADVR---NHLQTPTLRARMGGT--DLFVYHGYSELRLNDRWVK Mb0814c|M.bovis_AF2122/97 VPARIAFQTIDAPDKEFLSPQVRALWGGRTGRPFPWHSLGEAYLGRRWVK Rv0790c|M.tuberculosis_H37Rv VPARIAFQTIDAPDKEFLSPQVRALWGGRTGRPFPWHSLGEAYLGRRWVK MUL_3203|M.ulcerans_Agy99 VPARVAFQTLDSPEKEFLAPRVRALWGGKPGRPLAWHSLGEALFNGRWIK :***:.* : :.: : :* ** : :*. . : *:* MMAR_3134|M.marinum_M ATPAFNRELCARFGVP-PIDFDGRT--DALLHGFAGDGTQHMEYLRDRGA MAB_2079|M.abscessus_ATCC_1997 ATPAFNRELCARFGVS-PIEFDGRS--DALLHGFTADGTQHMEYLRDRGA Mflv_4586|M.gilvum_PYR-GCK ATPAFNAELCARFGVP-PIDFDGHS--DALLHAHDGEGSKHMEYLNDRGW Mb0814c|M.bovis_AF2122/97 LDATIDAPTAARLGKPYRQEFDGATPIPTVEGTILRENGSYADYPSAVAQ Rv0790c|M.tuberculosis_H37Rv LDATIDAPTAARLGKPYRQEFDGATPIPTVEGTILRENGSYADYPSAVAQ MUL_3203|M.ulcerans_Agy99 LDATIDAPTAARLGKPYPQEFDGITDIHTVEGPILRENGSYADYPREVAD .::: .**:* . :*** : :: :. .: :* . MMAR_3134|M.marinum_M FDDLPLAEILQALRTHYGTLIGDASRHPDLFA------------------ MAB_2079|M.abscessus_ATCC_1997 YDDLPLADILQALRTHYGTFIDQPNSRPDLFA------------------ Mflv_4586|M.gilvum_PYR-GCK YHDLPFTDIVTELHNRYGPLMQKSAPERDAFSQ----------------- Mb0814c|M.bovis_AF2122/97 WYERIAQSVLKALQSTEVHALVAADEELWTGP----------PVELAD-A Rv0790c|M.tuberculosis_H37Rv WYERIAQSVLKALQSTEVHALVAADEELWTGP----------PVELAD-A MUL_3203|M.ulcerans_Agy99 WYERLARAVVTALNSPEDRQVIAEDDDLWSGPKRAQVMRFAVPGGVAGGA : : :: *.. : . MMAR_3134|M.marinum_M ------------------ MAB_2079|M.abscessus_ATCC_1997 ------------------ Mflv_4586|M.gilvum_PYR-GCK ------------------ Mb0814c|M.bovis_AF2122/97 THRL-------------- Rv0790c|M.tuberculosis_H37Rv THRL-------------- MUL_3203|M.ulcerans_Agy99 PPRWVGYSAPKPKTVVES