For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PGSRWMKGAVVIGVFGVVLTTIPPVAADTSGVVAPPSPTAPCDAISPIAVPCVALGKATDAFGAECRRVG IADAHCVLPLAHKVTQAARGAYLQSWVHRVAQFQYALQDELPLRQAQWLGTHNSFNSLSESFTPSHADSN QQLSLAQQLDIDVRALELDLHYIRRLDLVGGRGVTVCHGLGPDKANLGCTTEPAFGNVLPEIANWLGTPA HSDQVILLYLEDELKDARAYASAVGTLDGVLRRPDGSSLIYRPNPAQRAADGCVRLPLNLSRNDVRASGA QVVVVGSCASGWASDVFNWDGVEVEKGSTSGYRAYPACDATYGAGTYASRLVRYYEDSTLVSALVKPTRP PTDPEALAPAKAKAMIDCGVNLFGFDQLLPEDGRIQASLWSWAPDEPRAGAGECTLQDRDGRWVSAPCTD AHPAACVTAAGTWAVTSTAVTFAGAPLACTAAGADFALPRSGDQNARLHAVSSSVGGAWVRYTLSPGT*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_3058 | - | - | 100% (489) | hypothetical protein MMAR_3058 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2100c | - | 1e-109 | 72.59% (259) | hypothetical protein Mb2100c |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv2075c | - | 0.0 | 72.28% (487) | hypothetical protein Rv2075c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mb2100c|M.bovis_AF2122/97 MPRARWLQSAALMGALAVVLITAAPVAADAYQVPAPPSPTASCDVISPVA Rv2075c|M.tuberculosis_H37Rv MPRARWLQSAALMGALAVVLITAAPVAADAYQVPAPPSPTASCDVISPVA MMAR_3058|M.marinum_M MPGSRWMKGAVVIGVFGVVLTTIPPVAADTSGVVAPPSPTAPCDAISPIA ** :**::.*.::*.:.*** * .*****: * *******.**.***:* Mb2100c|M.bovis_AF2122/97 IPCVALGKFADAVAAECRRVGVPDARCVLPLAHRVTQAARDAYLQSWVHR Rv2075c|M.tuberculosis_H37Rv IPCVALGKFADAVAAECRRVGVPDARCVLPLAHRVTQAARDAYLQSWVHR MMAR_3058|M.marinum_M VPCVALGKATDAFGAECRRVGIADAHCVLPLAHKVTQAARGAYLQSWVHR :******* :**..*******:.**:*******:******.********* Mb2100c|M.bovis_AF2122/97 TARFQDALQDPVPLRETQWLGTHNSFNSLSDSFTVSHADSNQQLSLAQQL Rv2075c|M.tuberculosis_H37Rv TARFQDALQDPVPLRETQWLGTHNSFNSLSDSFTVSHADSNQQLSLAQQL MMAR_3058|M.marinum_M VAQFQYALQDELPLRQAQWLGTHNSFNSLSESFTPSHADSNQQLSLAQQL .*:** **** :***::*************:*** *************** Mb2100c|M.bovis_AF2122/97 DIDVRALELDLHYLPRLEGHGAPGVTVCHGLGPKNANLGCTVEPLLATVL Rv2075c|M.tuberculosis_H37Rv DIDVRALELDLHYLPRLEGHGAPGVTVCHGLGPKNANLGCTVEPLLATVL MMAR_3058|M.marinum_M DIDVRALELDLHYIRRLDLVGGRGVTVCHGLGPDKANLGCTTEPAFGNVL *************: **: *. **********.:******.** :..** Mb2100c|M.bovis_AF2122/97 PQIANWLNAPGHTEEVILLYLEDQLKNASAYESVVATLDQVLRRADGTSL Rv2075c|M.tuberculosis_H37Rv PQIANWLNAPGHTEEVILLYLEDQLKNASAYESVVATLDQVLRRADGTSL MMAR_3058|M.marinum_M PEIANWLGTPAHSDQVILLYLEDELKDARAYASAVGTLDGVLRRPDGSSL *:*****.:*.*:::********:**:* ** *.*.*** ****.**:** Mb2100c|M.bovis_AF2122/97 IYRPNPARRGPQ-------------------------------------- Rv2075c|M.tuberculosis_H37Rv IYRPNPARRATNGCVPLPLDVSREEIRASGARAVLVGSCAPGWSAAVFDW MMAR_3058|M.marinum_M IYRPNPAQRAADGCVRLPLNLSRNDVRASGAQVVVVGSCASGWASDVFNW *******:*..: Mb2100c|M.bovis_AF2122/97 -------------------------------------------------- Rv2075c|M.tuberculosis_H37Rv SGVELESGSNSGYRPYPACDATYGRGVYAWRLVRYYEDSTLATALANPTR MMAR_3058|M.marinum_M DGVEVEKGSTSGYRAYPACDATYGAGTYASRLVRYYEDSTLVSALVKPTR Mb2100c|M.bovis_AF2122/97 -------------------------------------------------- Rv2075c|M.tuberculosis_H37Rv PPANPQALTPPKVPAMTDCGVNLFGFDQLLPEDGRIQASLWSWAPDEPRA MMAR_3058|M.marinum_M PPTDPEALAPAKAKAMIDCGVNLFGFDQLLPEDGRIQASLWSWAPDEPRA Mb2100c|M.bovis_AF2122/97 -------------------------------------------------- Rv2075c|M.tuberculosis_H37Rv GAGACALQGADGRWVAASCGDPHPAACRDAAGRWTVTPAPVVFAGAALAC MMAR_3058|M.marinum_M GAGECTLQDRDGRWVSAPCTDAHPAACVTAAGTWAVTSTAVTFAGAPLAC Mb2100c|M.bovis_AF2122/97 --------------------------------------- Rv2075c|M.tuberculosis_H37Rv TAIGADFTLPRTGNQNARLHAVAGPAGGAWVHYLLPP-- MMAR_3058|M.marinum_M TAAGADFALPRSGDQNARLHAVSSSVGGAWVRYTLSPGT