For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSGMGRFTKAEIEQAVRHYTTVVEGCSASGDWRPFADLFTEDVVYTEHHYGVFHGREAVREWIVAVMAPF PHMRFPSDWTAYDEDNDAVVLMIKNSLDHPTDPNGEPFWFPNWTRLVYAGDGLFCSEEDIYNPDRDAPRV IAAWLLAGGQLASDQILQPGP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2850 | - | - | 100% (161) | hypothetical protein MMAR_2850 |
M. marinum M | MMAR_0348 | - | 1e-21 | 40.15% (132) | hypothetical protein MMAR_0348 |
M. marinum M | MMAR_4934 | - | 3e-05 | 38.10% (42) | hypothetical protein MMAR_4934 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0143 | - | 2e-19 | 37.12% (132) | hypothetical protein Mb0143 |
M. gilvum PYR-GCK | Mflv_1107 | - | 8e-20 | 37.12% (132) | hypothetical protein Mflv_1107 |
M. tuberculosis H37Rv | Rv0138 | - | 2e-19 | 37.12% (132) | hypothetical protein Rv0138 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1928c | - | 3e-29 | 42.86% (147) | hypothetical protein MAB_1928c |
M. avium 104 | MAV_2774 | - | 2e-84 | 87.58% (161) | hypothetical protein MAV_2774 |
M. smegmatis MC2 155 | MSMEG_6475 | - | 4e-20 | 39.42% (137) | hypothetical protein MSMEG_6475 |
M. thermoresistible (build 8) | TH_0079 | - | 8e-23 | 39.26% (135) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_2907 | - | 1e-94 | 98.73% (158) | hypothetical protein MUL_2907 |
M. vanbaalenii PYR-1 | Mvan_5706 | - | 2e-19 | 36.36% (132) | hypothetical protein Mvan_5706 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_6475|M.smegmatis_MC2_155 ---MSRFSRDELSAAFARFEATVDTAARTKDWDVWVRHYTPDVDYVEHAA TH_0079|M.thermoresistible__bu -VTTPQFSREELAEAFANFEATVDRAARTKDWDPWANQYTVDVTYVEHAA Mb0143|M.bovis_AF2122/97 -MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAA Rv0138|M.tuberculosis_H37Rv -MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAA Mflv_1107|M.gilvum_PYR-GCK -MTGSTFSRDELVEAFAVFEGTVDRAAQTRDWDPWVDQYTDDILYIEHAA Mvan_5706|M.vanbaalenii_PYR-1 -MTGNTFTRDELAEAFAGFEKTVDRAAQTRDWDPWVDQYTDDILYIEHAA MAB_1928c|M.abscessus_ATCC_199 ---MPSFTRAELEEAFAQHQATVHRCIETGDWNPYAEMYTEDALYIEHVV MMAR_2850|M.marinum_M MSGMGRFTKAEIEQAVRHYTTVVEGCSASGDWRPFADLFTEDVVYTEHHY MUL_2907|M.ulcerans_Agy99 ---MGRFTKAEIEQAVRHYTTVVEGCSASGDWRPCADLFTEDVVYTEHHY MAV_2774|M.avium_104 MSAMGRFTRAEIENAVDNYTRVVEGCSASGDWRPFADLFTEDVVYTEHHY *:: *: *. . .* . : ** . :* * * ** MSMEG_6475|M.smegmatis_MC2_155 GTMKGREEVRAWIWKTMTSFPGNHMTAFPSLWTVIDEPTGRVICELDNPM TH_0079|M.thermoresistible__bu GTMRSREEVREWIWRTMTTFPGSHMTAFPSLWSVIDEPTGRIICELDNPM Mb0143|M.bovis_AF2122/97 GIMRGRQRVRAWIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELGNPM Rv0138|M.tuberculosis_H37Rv GIMRGRQRVRAWIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPM Mflv_1107|M.gilvum_PYR-GCK GTMRGREQVRPWIWKTMESFPGNYMTSFPSLWHVIDEDTGRIICELDNPM Mvan_5706|M.vanbaalenii_PYR-1 GTMRGRDEVRPWIWKTMESFPGSYMTSFPSLWSVIDEATARIICELDNPM MAB_1928c|M.abscessus_ATCC_199 GRLHGKEAIRQYITAVMAEFPGNHMPSLPATWTVFDPEKGWVVCEIDNVM MMAR_2850|M.marinum_M GVFHGREAVREWIVAVMAPFP---HMRFPSDWTAYDEDNDAVVLMIKNSL MUL_2907|M.ulcerans_Agy99 GVFHGREAVREWIVAVMAPFP---HMRFPSDWTAYDQDNDAVVLMIKNSL MAV_2774|M.avium_104 GVFRGREAVRDWIVAVMAPFP---HMRFPSGWTAYDEDNDAVVVMIKNLL * ::.:: :* :* .* ** :*: * . * . :: : * : MSMEG_6475|M.smegmatis_MC2_155 VDPGD--GTIISATNISILTYAGDGLWSRQEDVYNPLRFASAAMKWCRKA TH_0079|M.thermoresistible__bu IDPGD--GTVISATNLSILTYAGDGLWCRQEDVYNPLRFASAAMKWCRKA Mb0143|M.bovis_AF2122/97 LDPGD--GSVISATNISIITYAGNGQWCRQEDIYNPLRFLRAAMKWCRKA Rv0138|M.tuberculosis_H37Rv LDPGD--GSVISATNISIITYAGNGQWCRQEDIYNPLRFLRAAMKWCRKA Mflv_1107|M.gilvum_PYR-GCK RDPGD--GTIISATNISILTYAGDGRWRQQEDIYNPLRFVSAAVKWCRKA Mvan_5706|M.vanbaalenii_PYR-1 RDPGD--GTIISATNISILTYAGDGKWKRQEDIYNPLRFVSATVKWCRKA MAB_1928c|M.abscessus_ATCC_199 SDPGD--GQHWGEPNLTVLHYAGDGLWSQQEDAYNPANMVKMVRRWCRAA MMAR_2850|M.marinum_M DHPTDPNGEPFWFPNWTRLVYAGDGLFCSEEDIYNPDRDAPRVIAAWLLA MUL_2907|M.ulcerans_Agy99 DHPTDPNGEPFWFPNWTRLVYAGDGLFCSEEDIYNPDRDAPRVIAAWLLA MAV_2774|M.avium_104 DHPTDPQGEPFWFPNWTRLVYAGDGLFSSEEDIYNPNRDAPGVIAAWLQA .* * * .* : : ***:* : :** *** . . * MSMEG_6475|M.smegmatis_MC2_155 AELGTLTDEAAEWMAKF--GGRR-- TH_0079|M.thermoresistible__bu RELGTLTDEAAAWMEQY--GGRA-- Mb0143|M.bovis_AF2122/97 QELGTLDEDAARWMRRH--GGP--- Rv0138|M.tuberculosis_H37Rv QELGTLDEDAARWMRRH--GGP--- Mflv_1107|M.gilvum_PYR-GCK EELGTLPDEAAEWMAKY--GGKR-- Mvan_5706|M.vanbaalenii_PYR-1 EELGTLPDEAAQWMAKFSPGGRGAL MAB_1928c|M.abscessus_ATCC_199 EAAGNLPDEAREWLAKY--GPRQN- MMAR_2850|M.marinum_M G--GQLASDQILQPGP--------- MUL_2907|M.ulcerans_Agy99 G--GQLASDQILQPGP--------- MAV_2774|M.avium_104 G--GRLASNEILQPNP--------- * * .: