For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
CAQKYPEQRSTTSRIEGLLTWLGGGHWRELGERHERSTHAVAGAVVAFGAVLAWLVAGLAVSESVSWPGW AVVGVTLVFGLLIGAVTRGTASALTRRWPSIVGRAAVAVAVGVVVGELAALVAFSGSIDRYLDEHALRNA QTAPAVAAASESLRQSRTARRSLDNAVEEARVHLDSALVVARCEYHPTADCPQTRITGVPGRGPETRTAN QLLADSQRELDNALAARARQASNLDAKVARDEQALAEAQRAVVANAGGGLGTRWVAMNALTFASKGALAL RLLTIAFFALVYLLPLILWLWRGETTHDRHAAARAQRERAELDADTAIAVKRAEVRQAAEIMWAEHQLNQ TRMAIEAQAEIDRAQQRRRVIEALELPVHASSQRTDEPVEEDMYLPIAAEAEAAASRAVAELPAGAAKAD TDTTHHLPAQVESSPTVERHEQDRAAPLIPSIPDATKAAARWIRPLVPPFVARVIDNTTQPIRSARQVFE EVEEIAFSFKRTRKVTVNTESSDDHREQPAPQSAGADAPAPVNRIASSRGDAESGSWAEDGEGLETHQGQ PSLGQVPAADVVGLPVGTTKQHGRRELAEREGPRELRSPDGPRQLPPGK*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_2660 | - | - | 100% (610) | hypothetical protein MMAR_2660 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1808c | - | 0.0 | 69.07% (611) | integral membrane protein |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv1779c | - | 0.0 | 69.07% (611) | integral membrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. avium 104 | MAV_2942 | - | 1e-170 | 57.14% (616) | hypothetical protein MAV_2942 |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1808c|M.bovis_AF2122/97 MCAHEYAEQRSAVSGIEGLLTWLGGGHWRELGERHERSTHAVAGVIVAVG
Rv1779c|M.tuberculosis_H37Rv MCAHEYAEQRSAVSGIEGLLTWLGGGHWRELGERHERSTHAVAGVIVAVG
MMAR_2660|M.marinum_M MCAQKYPEQRSTTSRIEGLLTWLGGGHWRELGERHERSTHAVAGAVVAFG
MAV_2942|M.avium_104 ------------------MLIWLGGGEAGEPGERHERSAHAVAGAVVLLG
:* *****. * *******:*****.:* .*
Mb1808c|M.bovis_AF2122/97 AALAGLLASLAVSEAAQGPISSPIGAASLALVLGLLVGAVTRGTASGPAR
Rv1779c|M.tuberculosis_H37Rv AALAGLLASLAVSEAAQGPISSPIGAASLALVLGLLVGAVTRGTASGPAR
MMAR_2660|M.marinum_M AVLAWLVAGLAVSESVSWPGWAVVGVT---LVFGLLIGAVTRGTASALTR
MAV_2942|M.avium_104 SALAWLVAGLAAAG--RWPLPALVPAT---LVFGLLVGAIVRGTA-APAA
:.** *:*.**.: * : : .: **:***:**:.**** . :
Mb1808c|M.bovis_AF2122/97 GRAGVTGRASVAVAVGFVVGELAALVMFSGAIDRRLDEQAMHSADATPAA
Rv1779c|M.tuberculosis_H37Rv GRAGVTGRASVAVAVGFVVGELAALVMFSGAIDRRLDEQAMHSADATPAA
MMAR_2660|M.marinum_M RWPSIVGRAAVAVAVGVVVGELAALVAFSGSIDRYLDEHALRNAQTAPAV
MAV_2942|M.avium_104 GANRPVARGAVAAAVGVVVGELAALVILSGPIDQRLDEQASRTADSAPAV
..*.:**.***.********* :**.**: ***:* :.*:::**.
Mb1808c|M.bovis_AF2122/97 VQASASLQQARNARTALDSAVERARGRLDDALVVARCEYHPTPACPQTRI
Rv1779c|M.tuberculosis_H37Rv VQASASLQQARNARTALDSAVERARGRLDDALVVARCEYHPTPACPQTRI
MMAR_2660|M.marinum_M AAASESLRQSRTARRSLDNAVEEARVHLDSALVVARCEYHPTADCPQTRI
MAV_2942|M.avium_104 VTASATLRQAEEARAALDGAVAQARDRQDRALVVARCEYHPTPGCPQTRI
. ** :*:*:. ** :**.** .** : * ************. ******
Mb1808c|M.bovis_AF2122/97 TGVPGRGPETRTANQLLADAQRELDNALAARDHQAPALDAKMAHDEQALA
Rv1779c|M.tuberculosis_H37Rv TGVPGRGPETRTANQLLADAQRELDNALAARDHQAPALDAKMAHDEQALA
MMAR_2660|M.marinum_M TGVPGRGPETRTANQLLADSQRELDNALAARARQASNLDAKVARDEQALA
MAV_2942|M.avium_104 TGVPGPGPETRTANELLADAQRELDEALAARDSRAPELDAAVSRAQRAVA
***** ********:****:*****:***** :*. *** ::: ::*:*
Mb1808c|M.bovis_AF2122/97 EVRQAVVADAGRGLGSRWVAMNDLTLASAGALTARMLAIAFFALLYLLPL
Rv1779c|M.tuberculosis_H37Rv EVRQAVVADAGRGLGSRWVAMNDLTLASAGALTARMLAIAFFALLYLLPL
MMAR_2660|M.marinum_M EAQRAVVANAGGGLGTRWVAMNALTFASKGALALRLLTIAFFALVYLLPL
MAV_2942|M.avium_104 DARRAAMADAGRGPGARWIAMNDVTAGNAGALTLRLLTIGGCVLLYLTPL
:.::*.:*:** * *:**:*** :* .. ***: *:*:*. .*:** **
Mb1808c|M.bovis_AF2122/97 ILRLWRGDTTHDRHAAARAERERAELEADTAIAIKRAEVRRAAEIMWAEH
Rv1779c|M.tuberculosis_H37Rv ILRLWRGDTTHDRHAAARAERERAELEADTAIAIKRAEVRRAAEIMWAEH
MMAR_2660|M.marinum_M ILWLWRGETTHDRHAAARAQRERAELDADTAIAVKRAEVRQAAEIMWAEH
MAV_2942|M.avium_104 ILGLWRGETSHDRRAAARARRERAELDADTAIAIKRAEVRREAEIMWAEH
** ****:*:***:*****.******:******:******: ********
Mb1808c|M.bovis_AF2122/97 QLTQTRLAIEAQAEIDREQQRRRVVEALEGP---------VRASSERTLQ
Rv1779c|M.tuberculosis_H37Rv QLTQTRLAIEAQAEIDREQQRRRVVEALEGP---------VRASSERTLQ
MMAR_2660|M.marinum_M QLNQTRMAIEAQAEIDRAQQRRRVIEALELP---------VHASSQRTDE
MAV_2942|M.avium_104 QLTQSRLAIEAQTEIDREHQRRRVLDAVADPPSPRAFEPTSELTSELTSE
**.*:*:*****:**** :*****::*: * . :*: * :
Mb1808c|M.bovis_AF2122/97 PVEDEVYLPIAAETEAAS-RTVAQLPAGAAHHRPGIAKNLPAQVQPEGAV
Rv1779c|M.tuberculosis_H37Rv PVEDEVYLPIAAETEAAS-RTVAQLPAGAAHHRPGIAKNLPAQVQPEGAV
MMAR_2660|M.marinum_M PVEEDMYLPIAAEAEAAASRAVAELPAGAAKADTDTTHHLPAQVESSPTV
MAV_2942|M.avium_104 PARDDVYLPIAAEAEAAS-RAITQAPQPRVECDPGPQQ-LPSSPPPNDAV
*..:::*******:***: *:::: * .. .. : **:. .. :*
Mb1808c|M.bovis_AF2122/97 EPREK-RATPVIRSIPDATKAAARWIRPLVPPFVARMLDNT----TAPLR
Rv1779c|M.tuberculosis_H37Rv EPREK-RATPVIRSIPDATKAAARWIRPLVPPFVARMLDNT----TAPLR
MMAR_2660|M.marinum_M ERHEQDRAAPLIPSIPDATKAAARWIRPLVPPFVARVIDNT----TQPIR
MAV_2942|M.avium_104 EQDWS---TPLIPSIPDATKAAARWIRPLVPPLVARMMDTTTHRLTHPLR
* . :*:* *******************:***::*.* * *:*
Mb1808c|M.bovis_AF2122/97 TARQVFE----EVEEIAFSFKRTHKVTVNAEGSDPN-DQPPLESHSPAAP
Rv1779c|M.tuberculosis_H37Rv TARQVFE----EVEEIAFSFKRTHKVTVNAEGSDPN-DQPPLESHSPAAP
MMAR_2660|M.marinum_M SARQVFE----EVEEIAFSFKRTRKVTVNTESSDDHREQPAPQSAGADAP
MAV_2942|M.avium_104 TARQVFEGVVEETEEITFALRRTRKVTVNSQATQTASADPTEDTESRTES
:****** *.***:*:::**:*****::.:: :*. :: . .
Mb1808c|M.bovis_AF2122/97 AESNPIASSDSARRSR--------LATNDDHPPLAQVPPRDLASLSVGST
Rv1779c|M.tuberculosis_H37Rv AESNPIASSDSARRSR--------LATNDDHPPLAQVPPRDLASLSVGST
MMAR_2660|M.marinum_M APVNRIASSRGDAESGSWAEDGEGLETHQGQPSLGQVPAADVVGLPVGTT
MAV_2942|M.avium_104 RAAGPDFVTSTPQQPGPRAHRR--MTGRDARSSLPRSSAPDAGKLSVPSA
. : .. : .: :..* : .. * *.* ::
Mb1808c|M.bovis_AF2122/97 G-----ELTQREGPHELRSPDGPRQLPPPR
Rv1779c|M.tuberculosis_H37Rv G-----ELTQREGPHELRSPDGPRQLPPPR
MMAR_2660|M.marinum_M KQHGRRELAEREGPRELRSPDGPRQLPPGK
MAV_2942|M.avium_104 ADDR-AELTQRDGPAELEPPDGPRQLPPPH
**::*:** **..********* :