For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KNTCTLAATLTATVTLAAAALVGCSSNTESSPSSSSQSSRSNASSASSAATAAPTDPADYARLLIQASEI DAPEAFTASPPVRNPDGRPGVSTSFSNDDRSHVINDTIWVLPDPAAATSALDQRKNALDGIVTGTPDPFD VGVGGIAITGLSPDGTKGVTVLLFTQGRALAELEFDGPAEIPAPPEFVTDVGRKQDAAIKKGLTG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2632 | - | - | 100% (206) | hypothetical protein MMAR_2632 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | MAV_2964 | - | 6e-53 | 52.00% (200) | hypothetical protein MAV_2964 |
M. smegmatis MC2 155 | MSMEG_5924 | - | 2e-34 | 39.80% (196) | hypothetical protein MSMEG_5924 |
M. thermoresistible (build 8) | TH_0378 | - | 2e-25 | 35.20% (179) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_3107 | - | 1e-112 | 98.54% (206) | hypothetical protein MUL_3107 |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_5924|M.smegmatis_MC2_155 MSPTTVPRLRLLLTTGLAAAVVATAAGCQDAQLTADPATGKAPAASSSAA TH_0378|M.thermoresistible__bu MPETPVG-------AGGDFQQESTTTSPQDRSGQAKPTTG---------- MMAR_2632|M.marinum_M MKNTCTLAATLTATVTLAAAALVGCSSNTESSPSSSSQSSRSNASSASSA MUL_3107|M.ulcerans_Agy99 MKNTCTLAATLTATVTLAAAALVGCSSNTESSPSSSSQSSPSNASSASSA MAV_2964|M.avium_104 ------MIAGVAATTALAVS-VAGCGSNNKSQPSTSKTGSATSSTSATSP . . . . :. . MSMEG_5924|M.smegmatis_MC2_155 TSSPQAKAS-----DYSHLLLQAEDISIPPNTFTRRSTKVNPDGQDGASA TH_0378|M.thermoresistible__bu -SGDTADTC-----DYSQLLLQPNDLSDGEDTFTVRSTNPAPDGLAGASA MMAR_2632|M.marinum_M ATAAPTDPA-----DYARLLIQASEID-APEAFTASPPVRNPDGRPGVST MUL_3107|M.ulcerans_Agy99 ASAAPTDPA-----DYARLLIQASEID-APEAFTASPPVRNPDGRPGVST MAV_2964|M.avium_104 AAAPPSSPAPATPNEYAKLLIQASDIN-APVPFTGAPPTDNPNGQPGVST :. :... :*::**:*..::. .** .. *:* *.*: MSMEG_5924|M.smegmatis_MC2_155 LYVNADDTRAIADTILIYPDVATATATLQQAVGAINTMVEGGTPQPHPVG TH_0378|M.thermoresistible__bu LFVNTDDTRAISNTIVIYPDARTATRTLREGLPQIDSVITGGTPQPVPVG MMAR_2632|M.marinum_M SFSNDDRSHVINDTIWVLPDPAAATSALDQRKNALDGIVTG-TPDPFDVG MUL_3107|M.ulcerans_Agy99 SFSNDDRSHVINDTIWVLPDPAAATSELDQRKNALDGIVTG-TPDPFDVG MAV_2964|M.avium_104 TFKDEDGSHAIKITIGIYDDPGAATNALNAAKGQQGAVVKDPSTQPSNIG : : * ::.* ** : * :** * . :: . :.:* :* MSMEG_5924|M.smegmatis_MC2_155 TNGTVISGTAPDGSKAVTLLMFTQGRALVRLEFDSAIEDPVTEQTVTAIG TH_0378|M.thermoresistible__bu TDGTMIVGTSADGTKAATLLMFTEGPALAQLQFESALGDVTDERYVISAG MMAR_2632|M.marinum_M VGGIAITGLSPDGTKGVTVLLFTQGRALAELEFDGPAEIPAPPEFVTDVG MUL_3107|M.ulcerans_Agy99 VGGIAITGLSPDGTKGVTVLLFTQGRALAELEFDGPAEIPAPPEFVTDVG MAV_2964|M.avium_104 GGGTTLMGNAPDRSKGVVVLLFTEGKALATLEFDGPTDTLAPPEFVNDVG .* : * :.* :*...:*:**:* **. *:*:.. . . * * MSMEG_5924|M.smegmatis_MC2_155 RMQQIALRIGLPERE TH_0378|M.thermoresistible__bu KMQQIALRTGLGLCG MMAR_2632|M.marinum_M RKQDAAIKKGLTG-- MUL_3107|M.ulcerans_Agy99 RKQDAAIKKGLTG-- MAV_2964|M.avium_104 QKQDAAIKKGLGG-- : *: *:: **