For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GLLSRFRKRAPVSIYDKIGGYEAIEAVVEDFYVRVLADDQLGGFFTGTNMNRLKGKQAEFFAAALGGPEP YTGAPMKQVHQGRGITMAHFSLVAGHLGDSLTAAGVPSETVTDILKLVAPLATDIASGETTTAGV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2365 | glbN | - | 100% (136) | globin family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1569c | glbN | 8e-63 | 83.09% (136) | hemoglobin glbN |
M. gilvum PYR-GCK | Mflv_3264 | - | 3e-23 | 44.35% (124) | globin |
M. tuberculosis H37Rv | Rv1542c | glbN | 8e-63 | 83.09% (136) | hemoglobin glbN |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | MAV_3228 | - | 1e-57 | 80.00% (130) | globin |
M. smegmatis MC2 155 | MSMEG_5765 | - | 2e-46 | 71.19% (118) | globin |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_1541 | glbN | 1e-73 | 99.26% (136) | globin family protein |
M. vanbaalenii PYR-1 | Mvan_2981 | - | 3e-25 | 46.55% (116) | globin |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2365|M.marinum_M --MGLLSRFRKRAPVSIYDKIGGYEAIEAVVEDFYVRVLADDQLGGFFTG MUL_1541|M.ulcerans_Agy99 --MGLLSRFRKRAPVSIYDKIGGYEAIEAVVEDFYVRVLADDQLGGFFTG Mb1569c|M.bovis_AF2122/97 --MGLLSRLRKREPISIYDKIGGHEAIEVVVEDFYVRVLADDQLSAFFSG Rv1542c|M.tuberculosis_H37Rv --MGLLSRLRKREPISIYDKIGGHEAIEVVVEDFYVRVLADDQLSAFFSG MAV_3228|M.avium_104 MVMKILARFRKAEPASIYDRIGGHEALEVVVEDFYVRVLADEQLSGFFTG MSMEG_5765|M.smegmatis_MC2_155 -------------MTSIYEQIGGAEALEVVVEDFYRRVLADDELAGFFTG Mflv_3264|M.gilvum_PYR-GCK --------------MSIFDRIGGAAAVTAAVDDFYRRLIADPALTHFFDG Mvan_2981|M.vanbaalenii_PYR-1 --------------MSIFDQIGGPAAVTAAVDDFYRRVIADPELTPYFDG **:::*** *: ..*:*** *::** * :* * MMAR_2365|M.marinum_M TNMNRLKGKQAEFFAAALGGPEPYTGAPMKQVHQGRGITMAHFSLVAGHL MUL_1541|M.ulcerans_Agy99 TNMNRLKGKQAEFFAAALGGPEPYTGAPMKQVHQGRGITMAHFSLVAGHL Mb1569c|M.bovis_AF2122/97 TNMSRLKGKQVEFFAAALGGPEPYTGAPMKQVHQGRGITMHHFSLVAGHL Rv1542c|M.tuberculosis_H37Rv TNMSRLKGKQVEFFAAALGGPEPYTGAPMKQVHQGRGITMHHFSLVAGHL MAV_3228|M.avium_104 TNMNRLKGKQVEFFAAALGGPHPYTGAPMKQVHQGRGITMHHFGLVAGHL MSMEG_5765|M.smegmatis_MC2_155 TNMSRLKGRQVEFFATALGGPDEYTGAPMRQVHQGRGITMHHFDLVAGHL Mflv_3264|M.gilvum_PYR-GCK VDMKRLKTHQRSFIAAALGGPEPYLGRSMREAHSHLDISAAEFDRVVAHL Mvan_2981|M.vanbaalenii_PYR-1 VDMKRLKGHQRSFIAAAIGGPEPYLGRSMREAHSHLDIAPAHFDRVVDHL .:*.*** :* .*:*:*:***. * * .*::.*. .*: .*. *. ** MMAR_2365|M.marinum_M GDSLTAAGVPSETVTDILKLVAPLATDIASGETTTAGV MUL_1541|M.ulcerans_Agy99 GDSLTAAGVPSETVTNILKLVAPLATDIASGETTTAGV Mb1569c|M.bovis_AF2122/97 ADALTAAGVPSETITEILGVIAPLAVDVTSGESTTAPV Rv1542c|M.tuberculosis_H37Rv ADALTAAGVPSETITEILGVIAPLAVDVTSGESTTAPV MAV_3228|M.avium_104 ADALTAAGVPSETVSEILGAIAPLAPEIATGEAKATV- MSMEG_5765|M.smegmatis_MC2_155 GDALSAAGMPGATTSQIIAAIAPLAPEIATARTA---- Mflv_3264|M.gilvum_PYR-GCK VATLTDLEVSASIIEQVGSKLAPLKAEIVADNPTARAG Mvan_2981|M.vanbaalenii_PYR-1 AETLADLGVSVDIIGQIGAKLAPLKDEIVSPGAAARAS :*: :. :: :*** ::.: .