For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SLVAKTGARLMRSRTLMRAPIWIYRARAGAVFGSRMLMLEHIGRKSGTPRNAVLEVVDHPTPDTYVIASG FGKNSQWFRNIVANPRVRVYVGSHRAAPATARVLEQAEADQALASYRSHHPAAWENLKQVIEETLGSPIT DTDTALPMVELRLD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2296 | - | - | 100% (155) | hypothetical protein MMAR_2296 |
M. marinum M | MMAR_2750 | - | 3e-05 | 39.51% (81) | hypothetical protein MMAR_2750 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1902c | - | 5e-06 | 40.00% (80) | hypothetical protein Mb1902c |
M. gilvum PYR-GCK | Mflv_1991 | - | 7e-05 | 32.39% (71) | hypothetical protein Mflv_1991 |
M. tuberculosis H37Rv | Rv1871c | - | 5e-06 | 40.00% (80) | hypothetical protein Rv1871c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3398 | - | 3e-18 | 38.14% (118) | hypothetical protein MAB_3398 |
M. avium 104 | MAV_3285 | - | 8e-64 | 73.38% (154) | hypothetical protein MAV_3285 |
M. smegmatis MC2 155 | MSMEG_1981 | - | 1e-22 | 47.71% (109) | hypothetical protein MSMEG_1981 |
M. thermoresistible (build 8) | TH_4664 | - | 1e-58 | 70.07% (147) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | MUL_1499 | - | 2e-79 | 98.61% (144) | hypothetical protein MUL_1499 |
M. vanbaalenii PYR-1 | Mvan_0980 | - | 3e-45 | 54.90% (153) | hypothetical protein Mvan_0980 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2296|M.marinum_M -------------------------------------------------- MUL_1499|M.ulcerans_Agy99 -------------------------------------------------- MAV_3285|M.avium_104 -------------------------------------------------- TH_4664|M.thermoresistible__bu MTASVVIDPRFHDAVLFELGAVVDAAAGDGAGARVSDSAIILADKLRNAG Mvan_0980|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3398|M.abscessus_ATCC_1997 -------------------------------------------------- MSMEG_1981|M.smegmatis_MC2_155 -------------------------------------------------- Mb1902c|M.bovis_AF2122/97 -------------------------------------------------- Rv1871c|M.tuberculosis_H37Rv -------------------------------------------------- Mflv_1991|M.gilvum_PYR-GCK -------------------------------------------------- MMAR_2296|M.marinum_M -------------------------------------MSLVAKTGARLMR MUL_1499|M.ulcerans_Agy99 ------------------------------------------------MR MAV_3285|M.avium_104 ----------------------MGGVSAAR------ASSLSASIAARLLR TH_4664|M.thermoresistible__bu IAVAVFAPDGDGXXXAADRHPTKGAIMSSRKYPGKSARNALTDLGARILR Mvan_0980|M.vanbaalenii_PYR-1 ----------------------------------MAVKSWIANITDRVLH MAB_3398|M.abscessus_ATCC_1997 -------------------------------------MKKIQKPKPPTGF MSMEG_1981|M.smegmatis_MC2_155 -------------------------------------MKITKRVHPPSGL Mb1902c|M.bovis_AF2122/97 -------------------------------------------MNAAMNL Rv1871c|M.tuberculosis_H37Rv -------------------------------------------MNAAMNL Mflv_1991|M.gilvum_PYR-GCK ---------------------------------------MPRRVAEFNRR MMAR_2296|M.marinum_M SRTLMRAPIWIYRARAGAVFGSRMLMLEHIGRKSGTPRNAVLEVVDHP-T MUL_1499|M.ulcerans_Agy99 SRTLMRAPIWIYRARAGAVFGSRMLMLEHIGRKSGTPRNAVLEVVDHP-A MAV_3285|M.avium_104 SRQLMRAPIWIYRARGGAVFGSRILLLEHVGRKSGAPRYAALEVVDHP-S TH_4664|M.thermoresistible__bu SRRLMRAPIWLYRAGAGALLGPRMLMLEHIGRRSGAPRHVVLEVVDHP-E Mvan_0980|M.vanbaalenii_PYR-1 TRALVRAPIWVYRAGLGFVFGSRLLMLEHIGRTTGARRYVVLEVIDHP-S MAB_3398|M.abscessus_ATCC_1997 QRLLWRLPITLFRAHLGFLVTKRIMLLTHTGRASGRPRQAALEVVEHG-D MSMEG_1981|M.smegmatis_MC2_155 SKLLFRAPISMFRANLGWMFGNRLLLLHHIGRVSGKNREVVLEVVEHDPQ Mb1902c|M.bovis_AF2122/97 KREFVHRVQRFVVNPIGRQLP--MTMLETIGRKTGQPRRTAVGGRVVD-- Rv1871c|M.tuberculosis_H37Rv KREFVHRVQRFVVNPIGRQLP--MTMLETIGRKTGQPRRTAVGGRVVD-- Mflv_1991|M.gilvum_PYR-GCK VTNPATKSLTPWLPNLG--------TLEHVGRKSARRYRTPLLVFETA-- * * ** :. . : MMAR_2296|M.marinum_M PDTYVIASGFGKNSQWFRNIVANPRVRVYVGSHRAAPATARVLEQAEADQ MUL_1499|M.ulcerans_Agy99 PDTYVIASGFGKNSQWYRNIVANPRVRVYVGSHRAAPATARVLEQAEADQ MAV_3285|M.avium_104 PDAYVVASGFGRKAQWFRNIRANPRVRVYAGSHPPRAATARVLDQAEADR TH_4664|M.thermoresistible__bu PDVYVVASGFGTKAQWFRNITANPQVRVFLGSRAPAQATARVLDRQAADR Mvan_0980|M.vanbaalenii_PYR-1 PDVYVIASGFGAQAQWFRNVMADARVRISVGGRRSVAATARRLSPGEADL MAB_3398|M.abscessus_ATCC_1997 DGSIVAASGFGRAADWYKNVRKTPEVTIQVG-GRAHRARAAELSTDEGGD MSMEG_1981|M.smegmatis_MC2_155 TGAYTVASGWGPKAAWYRNVLAEPRVTIQVG-RRTIAVTALPLDQAEGAD Mb1902c|M.bovis_AF2122/97 -NQFWMVSEHGEHSDYVYNIKANPAVRVRIG-GRWRSGTAYLLPDDDPRQ Rv1871c|M.tuberculosis_H37Rv -NQFWMVSEHGEHSDYVYNIKANPAVRVRIG-GRWRSGTAYLLPDDDPRQ Mflv_1991|M.gilvum_PYR-GCK -DGYAILIGYGPQTDWVKNVLAGGPTVLHKRGRAVVLTDPRVVSKAEAAP . * : : *: . : . : MMAR_2296|M.marinum_M ALASYRSHHP----AAWENLKQVIEETLGSPITDTDTALPMVELRLD--- MUL_1499|M.ulcerans_Agy99 ALASYRSHHP----AAWENLKQVIEETLGSPITDTDTALPMVELRLD--- MAV_3285|M.avium_104 ALAAYRTRHP----RAWQRMRPVLEETLGVPITDTGTPLPMVELKLDQRM TH_4664|M.thermoresistible__bu VLAGYRARHP----RAWSRMKGVIEQTLGEPITDTDTPLPMVELQLRSAA Mvan_0980|M.vanbaalenii_PYR-1 ALSRYIERHP----RAWESLRTVLEGALQGRVAPPGTEVPMVEIRVR--- MAB_3398|M.abscessus_ATCC_1997 LMAHYAMRRPRSAKQLS-RLMGFEVDGSADDFREVGRAIPFVRFTP-MP- MSMEG_1981|M.smegmatis_MC2_155 IFARYAVRHRFLARHLLPRLMGFSVNGSLEDFRAAGEQIPFIRFVPRTPG Mb1902c|M.bovis_AF2122/97 RLRGLPRLNS-------------------AGVRAMGTDLLTIRVDLD--- Rv1871c|M.tuberculosis_H37Rv RLRGLPRLNS-------------------AGVRAMGTDLLTIRVDLD--- Mflv_1991|M.gilvum_PYR-GCK LVVARARPFY-------------------RLFPYDEGALLLTDAGPAR-- . . : MMAR_2296|M.marinum_M -------- MUL_1499|M.ulcerans_Agy99 -------- MAV_3285|M.avium_104 HTKKPSTP TH_4664|M.thermoresistible__bu P------- Mvan_0980|M.vanbaalenii_PYR-1 -------- MAB_3398|M.abscessus_ATCC_1997 -------- MSMEG_1981|M.smegmatis_MC2_155 -------- Mb1902c|M.bovis_AF2122/97 -------- Rv1871c|M.tuberculosis_H37Rv -------- Mflv_1991|M.gilvum_PYR-GCK --------