For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PDRPVTFLSDDQSWKLLSSAALGRLVTSIAGEPEIFPVNYVVQDRTVLFRTAEGTKLFLAVTSSPVAFEA DDHSDTEGWSVIVKGRAQVLRTDAEVQKAERAKLSPWIPTLKLHYVRVIPTGITGRHFKFGPEPDRNDTF A*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_1521 | - | - | 100% (142) | hypothetical protein MMAR_1521 |
M. marinum M | MMAR_3493 | - | 5e-40 | 57.81% (128) | hypothetical protein MMAR_3493 |
M. marinum M | MMAR_1549 | - | 8e-11 | 31.06% (132) | hypothetical protein MMAR_1549 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3153 | - | 3e-37 | 74.26% (101) | hypothetical protein Mb3153 |
M. gilvum PYR-GCK | Mflv_1183 | - | 7e-41 | 57.46% (134) | hypothetical protein Mflv_1183 |
M. tuberculosis H37Rv | Rv3129 | - | 4e-37 | 74.26% (101) | hypothetical protein Rv3129 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1041 | - | 4e-46 | 66.18% (136) | hypothetical protein MAB_1041 |
M. avium 104 | MAV_4009 | - | 2e-53 | 67.14% (140) | hypothetical protein MAV_4009 |
M. smegmatis MC2 155 | MSMEG_5243 | - | 1e-40 | 58.46% (130) | helix-hairpin-helix DNA-binding motif-containing protein |
M. thermoresistible (build 8) | TH_1671 | - | 8e-45 | 62.12% (132) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_2418 | - | 2e-79 | 100.00% (142) | hypothetical protein MUL_2418 |
M. vanbaalenii PYR-1 | Mvan_5621 | - | 2e-42 | 57.86% (140) | hypothetical protein Mvan_5621 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1183|M.gilvum_PYR-GCK ---MDAKTSSDAPVTELSESESWDLLGSVSLGRLVTTVNGWTEIFPVNFV Mvan_5621|M.vanbaalenii_PYR-1 MKTMDATTSSDTPVTELTETESWQLLGSVALGRLVTTVNGWTEIFPVNFV MAB_1041|M.abscessus_ATCC_1997 ------MTPDSQPVTLLEKYESWTLLSSAKLGRLVVVIDGKPEIFPINFV TH_1671|M.thermoresistible__bu ------MSTESQAITVLTEDQCWELLSGINLGRLVTDVEGRPDIFPVNFA MSMEG_5243|M.smegmatis_MC2_155 -MSDQITTTAGDAVTILSATECWDLLKSVALGRIVTTVDNTSHIFPINFV MMAR_1521|M.marinum_M --------MPDRPVTFLSDDQSWKLLSSAALGRLVTSIAGEPEIFPVNYV MUL_2418|M.ulcerans_Agy99 --------MPDRPVTFLSDDQSWKLLSSAALGRLVTSIAGEPEIFPVNYV Mb3153|M.bovis_AF2122/97 -------------------------------------------------M Rv3129|M.tuberculosis_H37Rv -------------------------------------------------M MAV_4009|M.avium_104 -------MGSDEPVQVLSEDENWRLLGSVALGRLVTNFAGEAEIFPVNFV Mflv_1183|M.gilvum_PYR-GCK VQKNTLLFRTAEGTKLLTAALNEYVVFEADDHNVAEGWSVVVRGKARLLA Mvan_5621|M.vanbaalenii_PYR-1 VQNNTVLFRTAEGTKLLTAALNEYVLFEADDHNVAEGWSVILRGKARLLA MAB_1041|M.abscessus_ATCC_1997 TQRGTVLFRTAEGTKLFGAVVSDQVLFEADDYNDIGGWSVVVRGAAQVLS TH_1671|M.thermoresistible__bu VQNRTVLFRTAEGTKLVSTVVNDQVLFEADDHTDTEAWSVIVRGTARTLS MSMEG_5243|M.smegmatis_MC2_155 VQNRTVLFRTAEGTKLVSAAINNNVLFEADDHDVEQGWSVIVRGVARTVR MMAR_1521|M.marinum_M VQDRTVLFRTAEGTKLFLAVTSSPVAFEADDHSDTEGWSVIVKGRAQVLR MUL_2418|M.ulcerans_Agy99 VQDRTVLFRTAEGTKLFLAVTSSPVAFEADDHSDTEGWSVIVKGRAQVLR Mb3153|M.bovis_AF2122/97 VQGRTVLFRTAEGAKLFSAVAKCAVAFEADDHNVAEGWSVIVKVRAQVLT Rv3129|M.tuberculosis_H37Rv VQGRTVLFRTAEGAKLFSAVAKCAVAFEADDHNVAEGWSVIVKVRAQVLT MAV_4009|M.avium_104 VQDRTVLFRTAEGTKLFSAVANHAVVFEVDDHNLVEGWSVIVRGRARLLK .* *:*******:**. :. . * **.**: .***::: *: : Mflv_1183|M.gilvum_PYR-GCK TSNEIAEARRGGLYPWIATQKERFVRITPQTLTGRRFVFGPEPE-VTGLS Mvan_5621|M.vanbaalenii_PYR-1 TSNELAEARRAGLYPWIATQKERFVRITPQSMTGRRFVFGPEPDNGSELA MAB_1041|M.abscessus_ATCC_1997 TSVEIDEADGAGLYPWIPTLKLHYVRIIPAQITGRRFVFGREPD-GGHVP TH_1671|M.thermoresistible__bu TFAEIEEAEAAGLRPWIATTKPHYVRITPHDISGRRFVFGPEPE-RTALI MSMEG_5243|M.smegmatis_MC2_155 DEADLAEAQRAELLPWTATAKTHWVRVLPTQITGRRFRFGPEPTADAS-- MMAR_1521|M.marinum_M TDAEVQKAERAKLSPWIPTLKLHYVRVIPTGITGRHFKFGPEPDRNDTFA MUL_2418|M.ulcerans_Agy99 TDAEVQKAERAKLSPWIPTLKLHYVRVIPTGITGRHFKFGPEPDRNDTFA Mb3153|M.bovis_AF2122/97 TDAGVREAERAQLLPWTATLKRHCVRVIPWEITGRHFRFGPEPDRSQTFA Rv3129|M.tuberculosis_H37Rv TDAGVREAERAQLLPWTATLKRHCVRVIPWEITGRHFRFGPEPDRSQTFA MAV_4009|M.avium_104 TDTDIQRAERAQLLPWTATLKPHYVRITPTEVTGRRFRFGPEPDRHEPVA : .* . * ** .* * : **: * ::**:* ** ** Mflv_1183|M.gilvum_PYR-GCK S-------- Mvan_5621|M.vanbaalenii_PYR-1 T-------- MAB_1041|M.abscessus_ATCC_1997 G-------- TH_1671|M.thermoresistible__bu S-------- MSMEG_5243|M.smegmatis_MC2_155 --------- MMAR_1521|M.marinum_M --------- MUL_2418|M.ulcerans_Agy99 --------- Mb3153|M.bovis_AF2122/97 CEASSHNQR Rv3129|M.tuberculosis_H37Rv CEASSHNQR MAV_4009|M.avium_104 ---------