For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERFSATPRQADLMI VAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVDHVVPVDIYLPGCPPRPEMLLH AILKLHEKIQEMPLGVNRERAIAEAEEAAMLARPTIEMRGLLR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_1482 | nuoB | - | 100% (184) | NADH dehydrogenase I (chain B) NuoB (NADH- ubiquinone oxidoreductase chain B) |
| M. marinum M | MMAR_1654 | - | 4e-18 | 40.19% (107) | oxidoreductase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3170 | nuoB | 1e-103 | 98.37% (184) | NADH dehydrogenase subunit B |
| M. gilvum PYR-GCK | Mflv_4482 | - | 4e-97 | 91.85% (184) | NADH dehydrogenase subunit B |
| M. tuberculosis H37Rv | Rv3146 | nuoB | 1e-103 | 98.37% (184) | NADH dehydrogenase subunit B |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2135 | - | 2e-93 | 89.13% (184) | NADH dehydrogenase subunit B |
| M. avium 104 | MAV_4034 | - | 1e-101 | 96.74% (184) | NADH dehydrogenase subunit B |
| M. smegmatis MC2 155 | MSMEG_2062 | nuoB | 1e-95 | 90.22% (184) | NADH dehydrogenase subunit B |
| M. thermoresistible (build 8) | TH_0636 | nuoB | 1e-93 | 89.13% (184) | PROBABLE NADH DEHYDROGENASE I (CHAIN B) NUOB |
| M. ulcerans Agy99 | MUL_2460 | nuoB | 1e-104 | 100.00% (184) | NADH dehydrogenase subunit B |
| M. vanbaalenii PYR-1 | Mvan_1884 | - | 1e-96 | 91.30% (184) | NADH dehydrogenase subunit B |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4482|M.gilvum_PYR-GCK MGLEEKLPGGILLSTVEKVAGYVRKGSLWPATFGLACCAIEMMATAGPRF
Mvan_1884|M.vanbaalenii_PYR-1 MGLEERLPGGILLSTVEKVAGYVRKGSLWPATFGLACCAIEMMATAGPRF
MSMEG_2062|M.smegmatis_MC2_155 MGLEERLPGGILLSTVETVAGYVRKGSLWPATFGLACCAIEMMSTAGPRF
MMAR_1482|M.marinum_M MGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRF
MUL_2460|M.ulcerans_Agy99 MGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRF
Mb3170|M.bovis_AF2122/97 MGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRF
Rv3146|M.tuberculosis_H37Rv MGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRF
MAV_4034|M.avium_104 MGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRF
MAB_2135|M.abscessus_ATCC_1997 MGLEEKLPSGFLLSTVETLAGYVRKGSLWPATFGLACCAIEMMSTAGPRF
TH_0636|M.thermoresistible__bu VGLEEQLPGGILLSTVEKVAGYVRKGSLWPATFGLACCAIEMMATASPRF
:****:**.*:******.:******.*****************:**.***
Mflv_4482|M.gilvum_PYR-GCK DISRFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAM
Mvan_1884|M.vanbaalenii_PYR-1 DISRFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAM
MSMEG_2062|M.smegmatis_MC2_155 DIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQMVEPKWVLAM
MMAR_1482|M.marinum_M DIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAM
MUL_2460|M.ulcerans_Agy99 DIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAM
Mb3170|M.bovis_AF2122/97 DIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAM
Rv3146|M.tuberculosis_H37Rv DIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAM
MAV_4034|M.avium_104 DIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAM
MAB_2135|M.abscessus_ATCC_1997 DIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAM
TH_0636|M.thermoresistible__bu DIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAM
**:**************************************.********
Mflv_4482|M.gilvum_PYR-GCK GVCASSGGMFNNYAVVQGVDHVVPVDIYLPGCPPRPEMLLHAILKLHDKI
Mvan_1884|M.vanbaalenii_PYR-1 GVCASSGGMFNNYAVVQGVDHVVPVDIYLPGCPPRPEMLLHAILKLHDKI
MSMEG_2062|M.smegmatis_MC2_155 GVCASSGGMFNNYAVVQGVDHVVPVDIYLPGCPPRPEMLLHAILKLHDKI
MMAR_1482|M.marinum_M GVCASSGGMFNNYAIVQGVDHVVPVDIYLPGCPPRPEMLLHAILKLHEKI
MUL_2460|M.ulcerans_Agy99 GVCASSGGMFNNYAIVQGVDHVVPVDIYLPGCPPRPEMLLHAILKLHEKI
Mb3170|M.bovis_AF2122/97 GVCASSGGMFNNYAIVQGVDHVVPVDIYLPGCPPRPEMLLHAILKLHEKI
Rv3146|M.tuberculosis_H37Rv GVCASSGGMFNNYAIVQGVDHVVPVDIYLPGCPPRPEMLLHAILKLHEKI
MAV_4034|M.avium_104 GVCASSGGMFNNYAIVQGVDHVVPVDIYLPGCPPRPEMLLYAILKLHEKI
MAB_2135|M.abscessus_ATCC_1997 GVCASSGGMFNNYAIVQGVDHVVPVDIYLPGCPPRPEMLLHAILKLHEKI
TH_0636|M.thermoresistible__bu GVCASSGGMFNNYAIVQGVDHVVPVDIYLPGCPPRPEMLLHAILKLHDKI
**************:*************************:******:**
Mflv_4482|M.gilvum_PYR-GCK QQMPLGVNREEAIREAEQAAMALTPTIELKGLLR
Mvan_1884|M.vanbaalenii_PYR-1 QQMPLGVNREEAIREAERAALAVTPTIELKGLLR
MSMEG_2062|M.smegmatis_MC2_155 QQMPLGVNREEAIREAEQAALAVPPTIELKGLLR
MMAR_1482|M.marinum_M QEMPLGVNRERAIAEAEEAAMLARPTIEMRGLLR
MUL_2460|M.ulcerans_Agy99 QEMPLGVNRERAIAEAEEAAMLARPTIEMRGLLR
Mb3170|M.bovis_AF2122/97 QQMPLGINRERAIAEAEEAALLARPTIEMRGLLR
Rv3146|M.tuberculosis_H37Rv QQMPLGINRERAIAEAEEAALLARPTIEMRGLLR
MAV_4034|M.avium_104 QQMPLGVNRETAIAEAEQAALSARPTIEMRGLLR
MAB_2135|M.abscessus_ATCC_1997 AHMPLGANREEVIRETEAAALAATPTIEMKGLLR
TH_0636|M.thermoresistible__bu QQMPLGVHRDEVIRETERAALAAPTTVEFKGRMR
.**** :*: .* *:* **: .*:*::* :*