For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTDTPDFTWLPDLALRPLGGAVIWANDESFAEKENLINPGPASYRPASFGHKGQVYDGWETRRRREPGHD QAIVRLGVPGVIRGVVVDTAWFKGNYPPEVSIEALAVDGYPPAEQLASDGGWETIVARAKVVGDADNPFV VSSEKRWTHVRLSIYPDGGVARLRVHGEGRPDRRFLGAGPLDLAALENGGLVLDCSNRFYSSPQHVIFPG LARVMGDGWETARRRDDGNDWVLIKLAGPGVVRLVEIDTSYFVGNSPGAAAVVGRQPTGEWIELLPRTNL LPDTRHRFLVSTKDVVDQARLEIYPDGGLSRLRLFGDLA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_1210 | alc | - | 100% (319) | allantoicase Alc |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2940 | - | 1e-142 | 74.21% (318) | allantoicase |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_5727 | alc | 1e-153 | 77.81% (320) | allantoicase |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2682 | alc | 0.0 | 100.00% (319) | allantoicase |
| M. vanbaalenii PYR-1 | Mvan_0935 | - | 1e-158 | 80.94% (320) | allantoicase |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1210|M.marinum_M MT-DTP----DFTWLPDLALRPLGGAVIWANDESFAEKENLINPGPASYR
MUL_2682|M.ulcerans_Agy99 MT-DTP----DFTWLPDLALRPLGGAVIWANDESFAEKENLINPGPASYR
MSMEG_5727|M.smegmatis_MC2_155 MS-ETPP---NFTWLPDLALRSLGGAVVWANDETFAEKENLISPGPSQYR
Mvan_0935|M.vanbaalenii_PYR-1 MT-DTPP---DFTWLPDLALRSLGGAVVWANDETFAEKENLISPGPSTYR
MAB_2940|M.abscessus_ATCC_1997 MTGNAPAGLPDFTMLPDLALRPLGGAVIWANDDLFAEKENLIKPGPADYR
*: ::* :** *******.*****:****: ********.***: **
MMAR_1210|M.marinum_M PASFGHKGQVYDGWETRRRRE----PGHDQAIVRLGVPGVIRGVVVDTAW
MUL_2682|M.ulcerans_Agy99 PASFGHKGQVYDGWETRRRRE----PGHDQAIVRLGVPGVIRGVVVDTAW
MSMEG_5727|M.smegmatis_MC2_155 PATFGHKGQIYDGWETRRRRE----AGHDSAIVRLGVPGVIRGIVVDTAW
Mvan_0935|M.vanbaalenii_PYR-1 PASFGHKGQVYDGWETRRRRE----PGHDTAIVRLGVPGVIRGMVVDTAW
MAB_2940|M.abscessus_ATCC_1997 PATFGHKGQVYDGWETRRRRDPAGDPGHDAAIVRLGVPGVIAGVVVDTAW
**:******:**********: .*** *********** *:******
MMAR_1210|M.marinum_M FKGNYPPEVSIEALAVDGYPPAEQLASDGGWETIVARAKVVGDADNPFVV
MUL_2682|M.ulcerans_Agy99 FKGNYPPEVSIEALAVDGYPPAEQLASDGGWETIVARAKVVGDADNPFVV
MSMEG_5727|M.smegmatis_MC2_155 FKGNYPPEVSVEAIEVDGYPTAGQLAADTGWTPLIERSRVHGDTRNNFEV
Mvan_0935|M.vanbaalenii_PYR-1 FKGNYPPTVSIDAIEVDGYPTAEELAADSGWATLIERTRVYGDTRNNFEV
MAB_2940|M.abscessus_ATCC_1997 FKGNYPPEISVEATEVEGYPPAAEIARDALWHTIVQRTKVYGDSRNPFDV
******* :*::* *:***.* ::* * * .:: *::* **: * * *
MMAR_1210|M.marinum_M SSEKRWTHVRLSIYPDGGVARLRVHGEGRPDRRFLGAGPLDLAALENGGL
MUL_2682|M.ulcerans_Agy99 SSEKRWTHVRLSIYPDGGVARLRVHGEGRPDRRFLGAGPLDLAALENGGL
MSMEG_5727|M.smegmatis_MC2_155 HSEDRWTHVRLNIFPDGGVARLRVHGEGRPDKRFLGIGPMDLAALENGAL
Mvan_0935|M.vanbaalenii_PYR-1 SSDNRWTHVRLNIYPDGGVARLRVHGEGRPDKRYLGTGTLDLAALENGGL
MAB_2940|M.abscessus_ATCC_1997 DSPRRWTHVRLTMYPDGGVARLRVHGHGQPDPRFLQAGQFDLAAIENGGL
* *******.::************.*:** *:* * :****:***.*
MMAR_1210|M.marinum_M VLDCSNRFYSSPQHVIFPGLARVMGDGWETARRRDDGNDWVLIKLAGPGV
MUL_2682|M.ulcerans_Agy99 VLDCSNRFYSSPQHVIFPGLARVMGDGWETARRRDDGNDWVLIKLAGPGV
MSMEG_5727|M.smegmatis_MC2_155 VLDCSNRFYSSPHNLIFPGLAQVMGDGWETARRRDDGNDWVRIRLAGPGR
Mvan_0935|M.vanbaalenii_PYR-1 VLDCSNRFYSSPQNLIFPGLAQVMGDGWETARRRDDANDWVRLRLAGPGR
MAB_2940|M.abscessus_ATCC_1997 VTDCSNRFYSSPQNLLFPGVARVMGDGWETARRRDGANDWVHVRLAGEGL
* **********::::***:*:*************..**** ::*** *
MMAR_1210|M.marinum_M VRLVEIDTSYFVGNSPGAAAVVGRQPTGEWIELLPRTNLLPDTRHRFLVS
MUL_2682|M.ulcerans_Agy99 VRLVEIDTSYFVGNSPGAAAVVGRQPTGEWIELLPRTNLLPDTRHRFLVS
MSMEG_5727|M.smegmatis_MC2_155 VRLAEVDTSYFVGNCPGEAALSGLRADGQWVELLPRTALLPDTRHRFLVD
Mvan_0935|M.vanbaalenii_PYR-1 VQLAEIDTSYFLGNSPGAAALTGLRPDGEWVELLGRTDLLPDTRHRFLVD
MAB_2940|M.abscessus_ATCC_1997 IRLAEIDTSYFVGNSPGASALQGLTAQGDWVPLLARTALQPDTRHRFLLD
::*.*:*****:**.** :*: * . *:*: ** ** * ********:.
MMAR_1210|M.marinum_M TKDVVDQARLEIYPDGGLSRLRLFGDLA----------
MUL_2682|M.ulcerans_Agy99 TKDVVDQARLEIYPDGGLSRLRLFGDLA----------
MSMEG_5727|M.smegmatis_MC2_155 VADVVSEVRLDIYPDGGLARLRLYGDLA----------
Mvan_0935|M.vanbaalenii_PYR-1 TDDVVCEARLDIYPDGGLARLRLFGELA----------
MAB_2940|M.abscessus_ATCC_1997 GQQPVTDVRLDIYPDGGLARLRLFGELTAAGRASLQGH
: * :.**:*******:****:*:*: