For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MANSLLDFVIALVRDPAAAARYAANPAQAIADAHLTDVTSADVNNLIPMVSDSLSMAGPSGAMAGAQPAD HGNVWASGAAAAALDSFSPHVAGAVVPQHQPSGGVINEPTPVASGDITADPHPVAFEPHQPSVLFTGAET PDPTFDHGVLPAADPAIWDHPVDHPHVTEPDHHGFGIHG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_0613 | - | - | 100% (179) | hypothetical protein MMAR_0613 |
| M. marinum M | MMAR_0614 | iniB | 2e-06 | 30.65% (124) | membrane protein, IniB |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0347 | - | 2e-62 | 62.57% (179) | hypothetical protein Mb0347 |
| M. gilvum PYR-GCK | Mflv_0275 | - | 1e-26 | 56.48% (108) | hypothetical protein Mflv_0275 |
| M. tuberculosis H37Rv | Rv0340 | - | 2e-62 | 62.57% (179) | hypothetical protein Rv0340 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4290c | - | 4e-19 | 38.61% (202) | hypothetical protein MAB_4290c |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_0693 | - | 5e-31 | 47.59% (187) | hypothetical protein MSMEG_0693 |
| M. thermoresistible (build 8) | TH_3335 | - | 5e-27 | 55.75% (113) | PUTATIVE - |
| M. ulcerans Agy99 | MUL_0578 | - | 1e-104 | 98.32% (179) | hypothetical protein MUL_0578 |
| M. vanbaalenii PYR-1 | Mvan_0622 | - | 3e-27 | 66.67% (87) | hypothetical protein Mvan_0622 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0613|M.marinum_M ---------MANSLLDFVIALVRDPAAAARYAANPAQAIADAHLTDVTSA
MUL_0578|M.ulcerans_Agy99 ---------MANSLLDFVIALVRDPAAAARYAANPAQAIADAHLTDVTSA
Mb0347|M.bovis_AF2122/97 ---------MANSLLDFVISLVRDPEAAARYAANPERSIAEAHLTDVTRA
Rv0340|M.tuberculosis_H37Rv ---------MANSLLDFVISLVRDPEAAARYAANPERSIAEAHLTDVTRA
Mflv_0275|M.gilvum_PYR-GCK ---------MANSLLDFVMALVRDPDAAARYAADPAQAIADADLGSVTST
Mvan_0622|M.vanbaalenii_PYR-1 ---------MANALLDFVMSLVRDPDAAARYAADPAQALADANLVDVTSA
MSMEG_0693|M.smegmatis_MC2_155 MIDQRMRGVMANTLLDFVMSLVRDPEAAARYAADPAQAIADADLNGVTSV
TH_3335|M.thermoresistible__bu ---------MANSLLDFVMSLVRDPDAAARYAADPDRAIAEANLTGVTSA
MAB_4290c|M.abscessus_ATCC_199 ---------MGNNLLDFVMALVRDQDMAAQYAANPERVIADAHLDGVQPS
*.* *****::**** **:***:* : :*:*.* .*
MMAR_0613|M.marinum_M DVNNLIPMVSDSLSMAGPSGAMAGAQ-----PADHGNVWASGAAAAALDS
MUL_0578|M.ulcerans_Agy99 DVNNLIPMVSDSLSMAGPSGAIAGAQ-----PADHGNVWASGAAAAALDS
Mb0347|M.bovis_AF2122/97 DVNSLIPVVSDSLSMSEPIGAAGGAH-----AGDRGNVWASGAATAALDA
Rv0340|M.tuberculosis_H37Rv DVNSLIPVVSDSLSMSEPIGAAGGAH-----AGDRGNVWASGAATAALDA
Mflv_0275|M.gilvum_PYR-GCK DVQNLIPVVAESLSMSVPAHGLDAFG-----AEPQANVWATGAATAAFDA
Mvan_0622|M.vanbaalenii_PYR-1 DVQNLIPVVAESLSMVAPAHGLDALS-----VEPVGNVWASGAATAAFDA
MSMEG_0693|M.smegmatis_MC2_155 DVDNLIPVVSESLSVGAATGGLDAYG-----AEPADNVWASGAATAAFDA
TH_3335|M.thermoresistible__bu DVDNLIPVVTESMPMGG-SAGVGPFGGADPGTEAAGNVWASGAATAAFDA
MAB_4290c|M.abscessus_ATCC_199 DVSALIPVVSESMPSISQLAAHPVASGLAHATIPADNIWASGAAVSAFDS
**. ***:*::*:. . *:**:***.:*:*:
MMAR_0613|M.marinum_M -FSPHVAGAVVPQHQPSGGVINEP---TPVASGDITADPHPVAFEPHQPS
MUL_0578|M.ulcerans_Agy99 -FSPHVAGAVVPQHQPSGGVINEP---TPVASGEVTADPHPVAFEPHQPS
Mb0347|M.bovis_AF2122/97 -FAPHADAGVVQQHGAVGSVLNQP---TPPGPGVTPTDPRPFRAGPHETS
Rv0340|M.tuberculosis_H37Rv -FAPHADAGVVQQHGAVGSVLNQP---TPPGPGVTPTDPRPFRAGPHETS
Mflv_0275|M.gilvum_PYR-GCK -FDV-----QVPATVVADSTPFA----PAVVEDIEPEGAVPTALD-LVEP
Mvan_0622|M.vanbaalenii_PYR-1 -FDVTE--DGLPERVVIDTDNGV----AETVDLFD----LPTSVQ-VGEP
MSMEG_0693|M.smegmatis_MC2_155 -FGD---------HVPFDTGSGG----QVIHAPADPEPAGADALSGPAEA
TH_3335|M.thermoresistible__bu -FAAPLPEPTVPEPVIGDGTWSAPVIDAGVIDAGEPGQGGAASTLPVDEK
MAB_4290c|M.abscessus_ATCC_199 PFTAPTHDPSLDAGLHAATDAVSDLSPRQDAITVPDQSTAPTDSAVAAID
* .
MMAR_0613|M.marinum_M VLFTGAETPDPTFDHG--VLPAADPAIWDHPVDHPHVTEP---------D
MUL_0578|M.ulcerans_Agy99 VLFTGAETPDPTFDHG--VLPAADPAIWDHPVDHPHVTEP---------D
Mb0347|M.bovis_AF2122/97 ALLTSAEIPDTTSEDG--GLPTDHPAVWNHPVVDPHTVEP---------D
Rv0340|M.tuberculosis_H37Rv ALLTSAEIPDTTSEDG--GLPTDHPAVWNHPVVDPHTVEP---------D
Mflv_0275|M.gilvum_PYR-GCK -AVSVQMDDPAVLDDV-PSTGVGLGAEWDTHLVDTDP----------GDL
Mvan_0622|M.vanbaalenii_PYR-1 DVVDVASGIDSGVDQV-PAVQSDPIEDFLQPADDIDP----------GDH
MSMEG_0693|M.smegmatis_MC2_155 VSATTPEIDPPVVEPL-QVEDPVFGTDWGQPVIPEHPDMG-----DHGDD
TH_3335|M.thermoresistible__bu LSPQLDQVIDSADEHAGQHVDAEALDDWTGIVSDPSGSGSSA-DQEPFDP
MAB_4290c|M.abscessus_ATCC_199 QFQAPPQSTDGGFEPQQFGADAGVTGSADPGLHDPFFDQGDLGHHPGIGH
:
MMAR_0613|M.marinum_M HHGFGIHG
MUL_0578|M.ulcerans_Agy99 HHGFGIHG
Mb0347|M.bovis_AF2122/97 HHGYDIHG
Rv0340|M.tuberculosis_H37Rv HHGYDIHG
Mflv_0275|M.gilvum_PYR-GCK PSSFDLFD
Mvan_0622|M.vanbaalenii_PYR-1 TPGFDLFD
MSMEG_0693|M.smegmatis_MC2_155 LSGLDIFD
TH_3335|M.thermoresistible__bu GPNLDFFN
MAB_4290c|M.abscessus_ATCC_199 DPGIDHF-
. . .