For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_0100 (-)

annotation: 4-hydroxybenzoate synthetase (chorismate lyase)
coordinates: 114798 - 115397
length: 199

MNRRYLSDEEIQGLNRDLRILVTTNGTLTRILNIVTADEIVIENIDQEILPDAPTPPDRAQLPKGGTLLR
NVVLKGRHSGSSFVAAETSIVVDRVPPELIESLMNTDRPIGELLVASRIEFFKEAPEVWIGELPEWIVAP
EYGISQHQALARRYTIIISGQPAIVITEHFLPEIFICCLNNDIAINKDIRPISAPRPKQ
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_0100--100% (199)4-hydroxybenzoate synthetase (chorismate lyase)
M. marinum MMMAR_1760-5e-4349.14% (175) chorismate pyruvate-lyase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2973c-4e-4347.75% (178) hypothetical protein Mb2973c
M. gilvum PYR-GCK-----
M. tuberculosis H37RvRv2949c-4e-4347.75% (178) hypothetical protein Rv2949c
M. leprae Br4923MLBr_00133-1e-4350.29% (175) hypothetical protein MLBr_00133
M. abscessus ATCC 19977-----
M. avium 104-----
M. smegmatis MC2 155-----
M. thermoresistible (build 8)-----
M. ulcerans Agy99MUL_2003-3e-4349.71% (175) chorismate pyruvate-lyase
M. vanbaalenii PYR-1-----

CLUSTAL 2.0.9 multiple sequence alignment


Mb2973c|M.bovis_AF2122/97         ----------MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEV
Rv2949c|M.tuberculosis_H37Rv      ----------MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEV
MLBr_00133|M.leprae_Br4923        ----------MTNRTLSREEIRKLDRDLRILVATNGTLTRVLNVVANEEI
MUL_2003|M.ulcerans_Agy99         MLAVLPEKREMTECHLSDEEIRKLNRDLRILIATNGTLTRILNVLANDEI
MMAR_0100|M.marinum_M             ----------MNRRYLSDEEIQGLNRDLRILVTTNGTLTRILNIVTADEI
                                            *..  ** :**: *:******:::******:**::: :*:

Mb2973c|M.bovis_AF2122/97         IVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILKGRNSEHLFVAAE
Rv2949c|M.tuberculosis_H37Rv      IVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILKGRNSEHLFVAAE
MLBr_00133|M.leprae_Br4923        VVDIINQQLLDVAPKIPELENL---KIGRILQRDILLKGQKSGILFVAAE
MUL_2003|M.ulcerans_Agy99         VVEIVKQQIQDAAPEMDGCDHS---SIGRVLRRDIVLKGRRSGIPFVAAE
MMAR_0100|M.marinum_M             VIENIDQEILPDAPTPPDRAQL---PKGGTLLRNVVLKGRHSGSSFVAAE
                                  ::: :.*.:   :*      :      *  * * ::***:.*   *****

Mb2973c|M.bovis_AF2122/97         SLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLPGWL
Rv2949c|M.tuberculosis_H37Rv      SLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLPGWL
MLBr_00133|M.leprae_Br4923        SLIVIDLLPTAITTYLTKTHHPIGEIMAASRIETYKEDAQVWIGDLPCWL
MUL_2003|M.ulcerans_Agy99         SFIAIDLLPPEIVASLLETHRPIGEVMAASCIETFKEEAKVWAGESPAWL
MMAR_0100|M.marinum_M             TSIVVDRVPPELIESLMNTDRPIGELLVASRIEFFKEAPEVWIGELPEWI
                                  : *.:* :*. :   * :*. *:**::.** ** :** .:** *: * *:

Mb2973c|M.bovis_AF2122/97         ALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRDAPHEEPDRWQ
Rv2949c|M.tuberculosis_H37Rv      ALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRDAPHEEPDRWQ
MLBr_00133|M.leprae_Br4923        ADYGYWDLPKRAVGRRYRIIAGGQPVIITTEYFLRSVFQDTPREELDRCQ
MUL_2003|M.ulcerans_Agy99         ELDRRRNLPPKVVGRQYRVIAEGRPVIIITEYFLRSVFEDNSREEPIRHQ
MMAR_0100|M.marinum_M             VAPEYGISQHQALARRYTIIISGQPAIVITEHFLPEIFICCLNNDIAINK
                                            :.:.*:* :*  *:* :: **:** .:*    .::    :

Mb2973c|M.bovis_AF2122/97         FSNAITLAR--------------
Rv2949c|M.tuberculosis_H37Rv      FSNAITLAR--------------
MLBr_00133|M.leprae_Br4923        YSNDIDTRSGDRFVLHGRVFKNL
MUL_2003|M.ulcerans_Agy99         RSVGTSARSGRSICT--------
MMAR_0100|M.marinum_M             DIRPISAPRPKQ-----------