For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MDAQGYCARWRQNADRRGVAARVVDEIVRRHGITPARFAVLETLTEFRDPLGKSYFLLRPDTPGEHAREA VLMTYILNAGTDYGIGKAPTDFPPAPYSAAEAVRIIARQHANDWSYRRDVRFVHRNGARLVTTPNGMLMG LGGNGIQRLFSARGGTTWGDIFMVNLGRLADPVDQLHRIIRSGRAWGRDAHGVPRAAHLDLDRLLHHEER HAAQWAARGYFGMLTGYGRELFRELVFRVVNRFEEDAGLCDGGYRASIPW
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_4840 | - | - | 100% (260) | hypothetical protein MAV_4840 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_1961 | - | 6e-58 | 48.65% (259) | hypothetical protein MSMEG_1961 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MAV_4840|M.avium_104 --------------------------------------------------
MSMEG_1961|M.smegmatis_MC2_155 MGDPTLDVDEQTMRDTASVFDETGRGVSGNQAGPAISGAAGAMPALAVGA
MAV_4840|M.avium_104 --------------------------------------------MDAQG-
MSMEG_1961|M.smegmatis_MC2_155 ACGTVGFALTEQAKQLGSDVTVYAQKLRVAADRYERGDEEAAERIDFAGT
:* *
MAV_4840|M.avium_104 ---------------------------------YCARWRQNADRRGVAAR
MSMEG_1961|M.smegmatis_MC2_155 AELPDAGEHPPVSDYEQALRDAGLLTGPVVPGSRYAQWLENASKNGVAPQ
*:* :**.:.***.:
MAV_4840|M.avium_104 VVDEIVRRHGITPARFAVLETLTEFRDPLGKSYFLLRPDTPGEHAREAVL
MSMEG_1961|M.smegmatis_MC2_155 TIVDIARTHNITPQSFDVLNGLQEVKDEDGKSFFILPSGTSKEDAKKAVV
.: :*.* *.*** * **: * *.:* ***:*:* ..*. *.*::**:
MAV_4840|M.avium_104 MTYILNAGTDYGIGKAP------------TDFPPAPYSAAEAVRIIARQH
MSMEG_1961|M.smegmatis_MC2_155 MTYILNAGTDYEAAEAGRDGVLGTADDVQNDFEETPYSAAEVQRIIDRQN
*********** .:* .** :******. *** **:
MAV_4840|M.avium_104 ANDWSYRRDVRFVHRNGARLVTTPNGMLMGLGGNGIQRLFSARGGTTWGD
MSMEG_1961|M.smegmatis_MC2_155 ANSWSY--DQIFDKGGGGSLATTPNGMLMGLGG-PVMDTIGVHGGTTYGD
**.*** * * : .*. *.************ : :..:****:**
MAV_4840|M.avium_104 IFMVNLGRLADPVDQLHRIIRSGRAWGRDAHGVPRAAHLDLDRLLHHEER
MSMEG_1961|M.smegmatis_MC2_155 VFVVNIDGSEDPAEQLTTIIESGSNWYMRDDGQLVQGRLDLDRLLHHEER
:*:**:. **.:** **.** * .* .:************
MAV_4840|M.avium_104 HAAQWAARGYFGMLTGYGRELFRELVFRVVNRFEEDAGLCDGGYRASIPW
MSMEG_1961|M.smegmatis_MC2_155 HSQQWAQKGFVRMARDYGLGALIEKRTG-VNPLERDAGLSDGGYA-----
*: *** :*:. * .** : * ** :*.****.****