For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ACGPASAAAMVLIEIWSGAKVSLVVPAIFLVLVSAFVGLQVKAARIHVSVELTEEALRQGTETILVREIV KVYPEAENNEASGKELARWQSARALGELVGVPRGRIGIGLKLTNGRTAQAWARRHRQLRAALTPLVQERV EPSRTDVLDRDPDDDAGTAQ*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_4636 | - | - | 100% (161) | hypothetical protein MAV_4636 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0526 | - | 2e-59 | 71.43% (161) | transmembrane protein |
| M. gilvum PYR-GCK | Mflv_0062 | - | 3e-46 | 64.34% (143) | putative transmembrane protein |
| M. tuberculosis H37Rv | Rv0513 | - | 2e-59 | 71.43% (161) | transmembrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3987c | - | 5e-29 | 43.67% (158) | hypothetical protein MAB_3987c |
| M. marinum M | MMAR_0846 | - | 1e-60 | 73.89% (157) | transmembrane protein |
| M. smegmatis MC2 155 | MSMEG_0959 | - | 2e-42 | 62.77% (137) | putative transmembrane protein |
| M. thermoresistible (build 8) | TH_2256 | - | 3e-44 | 65.22% (138) | POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_4602 | - | 3e-61 | 74.52% (157) | transmembrane protein |
| M. vanbaalenii PYR-1 | Mvan_0850 | - | 9e-47 | 64.34% (143) | putative transmembrane protein |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0846|M.marinum_M MTSAGE-------PKTLFYESGASWYWLLAGPFSALSLILIEKSTGAGIQ
MUL_4602|M.ulcerans_Agy99 MTSAGE-------PKTLFYESGASWYWLLAGPFSALSLILIEKSTGAGIQ
MAV_4636|M.avium_104 ---------------------------MACGPASAAAMVLIEIWSGAKVS
Mb0526|M.bovis_AF2122/97 MTPTGDT-----KPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVG
Rv0513|M.tuberculosis_H37Rv MTPTGDT-----KPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVG
Mflv_0062|M.gilvum_PYR-GCK MTGP-------RSPEVLFSEQGASWLWVLAGPAAGVAMALIQYSGGYGIQ
Mvan_0850|M.vanbaalenii_PYR-1 MTEPTETQPADTQPELLFYEQGASWLWVLAGPAAGAAMAMIQLSAGYGIQ
MSMEG_0959|M.smegmatis_MC2_155 MSGVPDASGAAPAGEVLFYEQGASWAWLLSGPIAGVGMAILQRTGGYGYD
TH_2256|M.thermoresistible__bu VSERS------APPQVLFHEPGASWWWAMLGPASAMSMLLIQRWAGYGVQ
MAB_3987c|M.abscessus_ATCC_199 MAKELEA------EPRLFYEPGGRWLWLLLGPLAGLIMFGLQVWGRGGVS
** :. : ::
MMAR_0846|M.marinum_M LITPVIFLVLVSVFVGIQVKAARIHTSVELTEESLRQGTETILVSEIVRV
MUL_4602|M.ulcerans_Agy99 LITPVIFLVLVSVFVGIQVKAARIHTSVELTEESLRQGTETILVSEIVRV
MAV_4636|M.avium_104 LVVPAIFLVLVSAFVGLQVKAARIHVSVELTEEALRQGTETILVREIVKV
Mb0526|M.bovis_AF2122/97 LITPAIFLVMVSAFVALQVKAARIHTSVELTHDALRQGTETIRLAEIVKI
Rv0513|M.tuberculosis_H37Rv LITPAIFLVMVSAFVALQVKAARIHTSVELTHDALRQGTETIRLAEIVKI
Mflv_0062|M.gilvum_PYR-GCK WVVPVLFLVLVSGFLAIQVKAARIHTSVELTTESLRQGTELIRTEEIVRI
Mvan_0850|M.vanbaalenii_PYR-1 WVVPGLFFVLVSGFLAIQVKAARIHTSVELTTEKLRQGTEVTLTDEIVRV
MSMEG_0959|M.smegmatis_MC2_155 LWIPLIFLVLVSGFIAIQIKAARIHTSVELTRETLRQGTEIISIDEIVDI
TH_2256|M.thermoresistible__bu LLMPGIFLVLVTGFLAIQIKAARIHTSVELTPETLRQGTETIRVDEIVRV
MAB_3987c|M.abscessus_ATCC_199 PVMPLIAAVLVAFFVSLQIYAVRVHASVELTPTELRQGGEILAVSQIRWL
* : *:*: *:.:*: *.*:*.***** **** * :* :
MMAR_0846|M.marinum_M FPEPENSVASGKSLAKWQSARALGELVGVPRGRVGIGIKLTGGRTAQAWA
MUL_4602|M.ulcerans_Agy99 FPEPENSVASGKSLAKWQSARALGELVGVPRGRVGIGIKLTGGRTAQAWA
MAV_4636|M.avium_104 YPEAENNEASGKELARWQSARALGELVGVPRGRIGIGLKLTNGRTAQAWA
Mb0526|M.bovis_AF2122/97 YPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGIGLKLTGGRTAQAWA
Rv0513|M.tuberculosis_H37Rv YPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGIGLKLTGGRTAQAWA
Mflv_0062|M.gilvum_PYR-GCK YPEA-----SGSETPKWQYARALGELTGVPRGRTGIGVRLTNDRTAQAWA
Mvan_0850|M.vanbaalenii_PYR-1 YPEA-----TGSETPKWQYARALGELTGVPRGRTGIGLRLTNDRTAQAWA
MSMEG_0959|M.smegmatis_MC2_155 YPEA-----SGSEVPKWQSARALGELTGVPRGRTGIGLKLTGKRVAQAWA
TH_2256|M.thermoresistible__bu FPEP-----TGSEVPKWQSARALGELTGVPRGRKGIGLKLTNDRTAQAWA
MAB_3987c|M.abscessus_ATCC_199 YSDD--------DRHIWEESRPLGELTGVPKGRKPVGLRLTGGRRAQAWA
:.: . *: :*.****.***:** :*::**. * *****
MMAR_0846|M.marinum_M RRHRHLRAALTPLVQERVGPTQ---VDRDAGDDTETAL
MUL_4602|M.ulcerans_Agy99 RRHRHLRAALTPLVQERVGPTQ---VDRDAGDDAETAL
MAV_4636|M.avium_104 RRHRQLRAALTPLVQERVEPSRTDVLDRDPDDDAGTAQ
Mb0526|M.bovis_AF2122/97 RRHQQLRAALTPLVQERLGPVDSDVADVN-GDDAGPAR
Rv0513|M.tuberculosis_H37Rv RRHQQLRAALTPLVQERLGPVDSDVADVN-GDDAGPAR
Mflv_0062|M.gilvum_PYR-GCK RKHHQLRAALTNLVEERIPPEPAQ--------------
Mvan_0850|M.vanbaalenii_PYR-1 RKHRQLRAALTNLIEERIPPEPAP--------------
MSMEG_0959|M.smegmatis_MC2_155 RRHRTLRAALQQLVEERTP-------------------
TH_2256|M.thermoresistible__bu RDGAGLRTELTRLVDERIP-------------------
MAB_3987c|M.abscessus_ATCC_199 KKHEELRAALATLVPA--PPAGMDLGDDPEIDSESEQW
: **: * *: