For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LIPRKVKHRKQHHPRQRGIASGGTAVNFGDYGIQALEHAYVTNRQIESARIAINRHIKRGGKVWINVFPD RPLTKKPAETRMGSGKGSPEWWVVNVKPGRVLFELSYPNEQTARAALTRAIHKLPIKARIVTREDQF*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_4464 | rplP | - | 100% (138) | 50S ribosomal protein L16 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0728 | rplP | 8e-76 | 94.93% (138) | 50S ribosomal protein L16 |
| M. gilvum PYR-GCK | Mflv_5042 | rplP | 3e-73 | 91.30% (138) | 50S ribosomal protein L16 |
| M. tuberculosis H37Rv | Rv0708 | rplP | 8e-76 | 94.93% (138) | 50S ribosomal protein L16 |
| M. leprae Br4923 | MLBr_01856 | rplP | 5e-78 | 97.83% (138) | 50S ribosomal protein L16 |
| M. abscessus ATCC 19977 | MAB_3813c | rplP | 1e-72 | 89.86% (138) | 50S ribosomal protein L16 |
| M. marinum M | MMAR_1038 | rplP | 9e-76 | 94.93% (138) | 50S ribosomal protein L16, RplP |
| M. smegmatis MC2 155 | MSMEG_1443 | rplP | 3e-74 | 92.75% (138) | 50S ribosomal protein L16 |
| M. thermoresistible (build 8) | TH_0400 | rplP | 2e-74 | 92.03% (138) | PROBABLE 50S RIBOSOMAL PROTEIN L16 RPLP |
| M. ulcerans Agy99 | MUL_0797 | rplP | 6e-76 | 94.93% (138) | 50S ribosomal protein L16 |
| M. vanbaalenii PYR-1 | Mvan_1312 | rplP | 3e-73 | 92.03% (138) | 50S ribosomal protein L16 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_5042|M.gilvum_PYR-GCK MLIPRKVKHRKQHHPRQRGIASGGTSVSFGDYGIQAMGHAYITNRQIESA
Mvan_1312|M.vanbaalenii_PYR-1 MLIPRKVKHRKQHHPKQRGIASGGTSVSFGDYGIQALGHAYVTNRQIESA
MSMEG_1443|M.smegmatis_MC2_155 MLIPRKVKHRKQHHPEQRGIASGGTSVSFGDYGIQALEHAYITNRQIESA
MAV_4464|M.avium_104 MLIPRKVKHRKQHHPRQRGIASGGTAVNFGDYGIQALEHAYVTNRQIESA
MLBr_01856|M.leprae_Br4923 MLIPRKVKHRKQHHPRQRGIASGGTKVNFGDYGIQALEHAYVTNRQIESA
MMAR_1038|M.marinum_M MLIPRKVKHRKQHHPRQRGIASGGTSVNFGDYGIQALEHAYVTNRQIESA
MUL_0797|M.ulcerans_Agy99 MLIPRKVKHRKQHHPRQRGIASGGTSVNFGDYGIQALEHAYVTNRQIESA
Mb0728|M.bovis_AF2122/97 MLIPRKVKHRKQHHPRQRGIASGGTTVNFGDYGIQALEHAYVTNRQIESA
Rv0708|M.tuberculosis_H37Rv MLIPRKVKHRKQHHPRQRGIASGGTTVNFGDYGIQALEHAYVTNRQIESA
MAB_3813c|M.abscessus_ATCC_199 MLIPRKVKHRKQHHPKKKGTASGGTTVAFGDYGIQALGHAYITNRQIESA
TH_0400|M.thermoresistible__bu MLIPRKVKHRKQHHPKQRGLASGGTTVEFGDYGIQALTHGYITNRQIESA
***************.::* ***** * ********: *.*:********
Mflv_5042|M.gilvum_PYR-GCK RIAINRHIKRGGKVWINIFPDRPLTKKPAETRMGSGKGSPEWWVANVKPG
Mvan_1312|M.vanbaalenii_PYR-1 RIAINRHIKRGGKVWINIFPDRPLTKKPAETRMGSGKGSPEWWVANVKPG
MSMEG_1443|M.smegmatis_MC2_155 RIAINRHIKRGGKVWINIFPDRPLTKKPAETRMGSGKGSPEWWVANVKPG
MAV_4464|M.avium_104 RIAINRHIKRGGKVWINVFPDRPLTKKPAETRMGSGKGSPEWWVVNVKPG
MLBr_01856|M.leprae_Br4923 RIAINRHIKRGGKVWINIFPDRPLTKKPAETRMGSGKGSPEWWVVNVKPG
MMAR_1038|M.marinum_M RIAINRHIKRGGKVWINIFPDRPLTKKPAETRMGSGKGSPEWWVANVKPG
MUL_0797|M.ulcerans_Agy99 RIAINRHIKRGGKVWINIFPDRPLTKKPAETRMGSGKGSPEWWVANVKPG
Mb0728|M.bovis_AF2122/97 RIAINRHIKRGGKVWINIFPDRPLTKKPAETRMGSGKGSPEWWVANVKPG
Rv0708|M.tuberculosis_H37Rv RIAINRHIKRGGKVWINIFPDRPLTKKPAETRMGSGKGSPEWWVANVKPG
MAB_3813c|M.abscessus_ATCC_199 RIAINRHIKRGGKVWINIFPDRPLTKKPAETRMGSGKGSPEWWVANVKPG
TH_0400|M.thermoresistible__bu RIAINRHIKRGGKVWINIFPDRPLTKKPAETRMGSGKGSPEWWVANVKPG
*****************:**************************.*****
Mflv_5042|M.gilvum_PYR-GCK RVLFELSYPDEKIAREALTRAIHKLPIKARIVTREEQF
Mvan_1312|M.vanbaalenii_PYR-1 RVLFELSYPDEKIAREALTRAIHKLPIKARIVTREEQF
MSMEG_1443|M.smegmatis_MC2_155 RVLFELSYPDEKTARDALTRAIHKLPIKARIVTREEQF
MAV_4464|M.avium_104 RVLFELSYPNEQTARAALTRAIHKLPIKARIVTREDQF
MLBr_01856|M.leprae_Br4923 RVLFELSYPNEQTARAALTRAIHKLPIKARIVTREEQF
MMAR_1038|M.marinum_M RVLFELSYPNEAIARAALTRAIHKLPIKARIITREEQF
MUL_0797|M.ulcerans_Agy99 RVLFELSYPNEAIARAALTRAIHKLPIKARIITREEQF
Mb0728|M.bovis_AF2122/97 RVLFELSYPNEGVARAALTRAIHKLPIKARIITREEQF
Rv0708|M.tuberculosis_H37Rv RVLFELSYPNEGVARAALTRAIHKLPIKARIITREEQF
MAB_3813c|M.abscessus_ATCC_199 RVLFELSYPNEETARQALTRAIHKLPIKARIITREEQF
TH_0400|M.thermoresistible__bu RVLFELSYPNEETARAALTRAIHKLPIKARIVTREEQF
*********:* ** ***************:***:**