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SQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNPQTRGLIAVVSHLVEVAPADASSAGTGGSKK *
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_4447 | rpmD | - | 100% (71) | 50S ribosomal protein L30 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0743 | rpmD | 1e-25 | 85.29% (68) | 50S ribosomal protein L30 |
| M. gilvum PYR-GCK | Mflv_5029 | rpmD | 8e-22 | 78.69% (61) | ribosomal protein L30 |
| M. tuberculosis H37Rv | Rv0722 | rpmD | 1e-25 | 85.29% (68) | 50S ribosomal protein L30 |
| M. leprae Br4923 | MLBr_01841 | rpmD | 1e-26 | 80.00% (70) | 50S ribosomal protein L30 |
| M. abscessus ATCC 19977 | MAB_3794c | rpmD | 5e-20 | 76.79% (56) | 50S ribosomal protein L30 |
| M. marinum M | MMAR_1053 | rpmD | 5e-25 | 82.09% (67) | 50S ribosomal protein L30, RpmD |
| M. smegmatis MC2 155 | MSMEG_1473 | rpmD | 4e-21 | 82.14% (56) | ribosomal protein L30 |
| M. thermoresistible (build 8) | TH_0305 | rpmD | 1e-21 | 83.93% (56) | PROBABLE 50S RIBOSOMAL PROTEIN L30 RPMD |
| M. ulcerans Agy99 | MUL_0812 | rpmD | 3e-25 | 82.09% (67) | 50S ribosomal protein L30 |
| M. vanbaalenii PYR-1 | Mvan_1340 | rpmD | 6e-21 | 82.14% (56) | ribosomal protein L30 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_5029|M.gilvum_PYR-GCK MA----ELKITQVRSTIGARWKQRESLRTLGLRKIRQSVVREDNAQTRGL
Mvan_1340|M.vanbaalenii_PYR-1 MA----ELKITQVRSTIGARWKQRESLRTLGLRKIRQSVVREDNAQTRGL
MSMEG_1473|M.smegmatis_MC2_155 MA----ELKITQVRSTIGARWKQRESLRTLGLKKIRQSVVREDNAQTRGL
TH_0305|M.thermoresistible__bu MA----QLKITQVRSTIGARWKQRESLRTLGLRKIRQSVVREDTPQTRGL
MAB_3794c|M.abscessus_ATCC_199 MA----DVKITQVRSTIGARWKQRESLKTLGLRKIRQTVVREDNAQTRGL
Mb0743|M.bovis_AF2122/97 MS----QLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGL
Rv0722|M.tuberculosis_H37Rv MS----QLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGL
MMAR_1053|M.marinum_M MSEATNQLKITQVRSTIGARWKQRESLRTLGLRRIRHTVVRDDNAQTRGL
MUL_0812|M.ulcerans_Agy99 MSEATNQLKITQVRSTIGARWKQRESLRTLGLRRIRHTVVRDDNAQTRGL
MAV_4447|M.avium_104 MS----QLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNPQTRGL
MLBr_01841|M.leprae_Br4923 MA----SLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGL
*: .:**********.********:****::**::*:*:*. ****
Mflv_5029|M.gilvum_PYR-GCK IKTVHHLVEVEEVKA----------
Mvan_1340|M.vanbaalenii_PYR-1 IKTVHHLVTVEEV------------
MSMEG_1473|M.smegmatis_MC2_155 INTVHHLVEVEEVGK----------
TH_0305|M.thermoresistible__bu IKAVHHLVTVEEV------------
MAB_3794c|M.abscessus_ATCC_199 LQVVRHLVTVEDVK-----------
Mb0743|M.bovis_AF2122/97 IAVVRHLVEVEPAQ-----TGGKT-
Rv0722|M.tuberculosis_H37Rv IAVVRHLVEVEPAQ-----TGGKT-
MMAR_1053|M.marinum_M IAVVRHLVEVEPAQN---GTGGKAQ
MUL_0812|M.ulcerans_Agy99 IAVVRHLVEVEPAQN---GTGGKAQ
MAV_4447|M.avium_104 IAVVSHLVEVAPADASSAGTGGSKK
MLBr_01841|M.leprae_Br4923 IAVVRHLVEVEPATGGSTPVGGGRD
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