For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TAWVDREFERHDFTDEDLVGLSTERVVFTECNFSGANLAESRHRASAFRNCTFRRTSLWHSTFEQCTMLG SVFEQCRLRPVTFDEVDFTLAVLGGNDLRGVDLSGCRLRVTSLVEADLRKAVLRGADLRGARTTGTRLDD ADLCGGAADPALWTTASLAGARVDVDQAVAFALAHGLRLDGGDG*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_4327 | - | - | 100% (185) | hypothetical protein MAV_4327 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3396c | - | 4e-77 | 75.41% (183) | hypothetical protein Mb3396c |
| M. gilvum PYR-GCK | Mflv_4885 | - | 4e-63 | 65.54% (177) | pentapeptide repeat-containing protein |
| M. tuberculosis H37Rv | Rv3361c | - | 4e-77 | 75.41% (183) | hypothetical protein Rv3361c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3699c | - | 2e-61 | 63.33% (180) | hypothetical protein MAB_3699c |
| M. marinum M | MMAR_1169 | - | 6e-77 | 76.40% (178) | hypothetical protein MMAR_1169 |
| M. smegmatis MC2 155 | MSMEG_1641 | - | 5e-67 | 64.84% (182) | hypothetical protein MSMEG_1641 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2846 | - | 4e-77 | 76.40% (178) | hypothetical protein MUL_2846 |
| M. vanbaalenii PYR-1 | Mvan_1540 | - | 2e-63 | 64.97% (177) | pentapeptide repeat-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4885|M.gilvum_PYR-GCK ----MDSTHPREADREFDGHDFCDADLSGLRTERVVYTECDFTGADLSDS
Mvan_1540|M.vanbaalenii_PYR-1 ----MD---AHEADREYGGHDFRDQDLSRVRTERVVFTECDFTGADFSDS
MSMEG_1641|M.smegmatis_MC2_155 MRIGANGDETVWADEEFAGRDFRDEDLSRIRTERVVFTECDFSGVDLSES
MMAR_1169|M.marinum_M --------MEHWVDCEFTDRDFRDEDLSRLRTERVVFSECNFGGVNLTES
MUL_2846|M.ulcerans_Agy99 --------MEHWVDCEFTGRDFRDEDLSRLRTERVVFSECNFGGVNLTES
Mb3396c|M.bovis_AF2122/97 --------MQQWVDCEFTGRDFRDEDLSRLHTERAMFSECDFSGVNLAES
Rv3361c|M.tuberculosis_H37Rv --------MQQWVDCEFTGRDFRDEDLSRLHTERAMFSECDFSGVNLAES
MAV_4327|M.avium_104 --------MTAWVDREFERHDFTDEDLVGLSTERVVFTECNFSGANLAES
MAB_3699c|M.abscessus_ATCC_199 -------MAEHWTDREITAETFYDEDFRELHTERVVFTECDFSGANLTES
.* * . * * *: : ***.:::**:* *.::::*
Mflv_4885|M.gilvum_PYR-GCK DHTGSAFRNCTFRRTSLWHSTFRHCSFLGSTFTECRLRPLTLVEVDFTLA
Mvan_1540|M.vanbaalenii_PYR-1 EHTGSAFRNCIFRRTSLWHSTFRHCSFLGSTFTECRLRPLTLVEVDFTLA
MSMEG_1641|M.smegmatis_MC2_155 EHHGSAFRNCTFRRSTIWHSTFTNCSLLGSVFTECRIRPVTFVECDFTLA
MMAR_1169|M.marinum_M EHRGSAFRNCSFERTTLWHSTFAQCSMLGSVFVSCRMRPLVLDEVDFTLA
MUL_2846|M.ulcerans_Agy99 EHRGSAFRNCSFERTTLWHSTFAQCSMLGSVFVSCRMRPLVLDEVDFTLA
Mb3396c|M.bovis_AF2122/97 QHRGSAFRNCTFERTTLWHSTFAQCSMLGSVFVACRLRPLTLDDVDFTLA
Rv3361c|M.tuberculosis_H37Rv QHRGSAFRNCTFERTTLWHSTFAQCSMLGSVFVACRLRPLTLDDVDFTLA
MAV_4327|M.avium_104 RHRASAFRNCTFRRTSLWHSTFEQCTMLGSVFEQCRLRPVTFDEVDFTLA
MAB_3699c|M.abscessus_ATCC_199 LHVGSAFRNCTFRRTSLWHSEFRQCSLLGSTFTDCRVRPSKFTETDFTLS
* .****** *.*:::*** * :*::***.* **:** : : ****:
Mflv_4885|M.gilvum_PYR-GCK VLAGVDLRKTDLSDCRLRETSLVGTDLREAVLAHADLTGARVQDAKFDGA
Mvan_1540|M.vanbaalenii_PYR-1 VLAGVDLRKTDLSDCRLRETSLVGTDLREAVLTRADLSGARVQDARLENA
MSMEG_1641|M.smegmatis_MC2_155 VLGGCDLRAVDLSDCRLREVSLVGADLRKAVLRRADLTGSRVQDARLEEA
MMAR_1169|M.marinum_M VLGGNDLRGVDLSGCRLREASLVETDLRKSVLRGADLRGARTNGTKLDDA
MUL_2846|M.ulcerans_Agy99 VLGGNDLRGVDLSGCRLREASLVETDLRKSVLRGADLRGARTNGTKLDDA
Mb3396c|M.bovis_AF2122/97 VLGGNDLRGLNLTGCRLRETSLVDTDLRKCVLRGADLSGARTTGARLDDA
Rv3361c|M.tuberculosis_H37Rv VLGGNDLRGLNLTGCRLRETSLVDTDLRKCVLRGADLSGARTTGARLDDA
MAV_4327|M.avium_104 VLGGNDLRGVDLSGCRLRVTSLVEADLRKAVLRGADLRGARTTGTRLDDA
MAB_3699c|M.abscessus_ATCC_199 SLAGLDLREMDLSDCRFREANLVGADMRKANLHGADFTGARTQNLKLDGA
*.* *** :*:.**:* ..** :*:*:. * **: *:*. . ::: *
Mflv_4885|M.gilvum_PYR-GCK DLRGARVDPTFWTTARLRAAKVDLPQALAFAAAHGLDIGG---
Mvan_1540|M.vanbaalenii_PYR-1 DLRGARVDPTFWTTAKLRGAKVDIDQAIAFAAAHGLDIGG---
MSMEG_1641|M.smegmatis_MC2_155 DLRGTRVDPTFWTTAKVRGAKIDIEQALAYAAAHGLAVHGG--
MMAR_1169|M.marinum_M DLRGANLDPSLWRSASLAGARIDVPQALSFALAHGLRLDS---
MUL_2846|M.ulcerans_Agy99 DLRGANPDPSLWRSASLAGARIDVPQALSFALAHGLRLDS---
Mb3396c|M.bovis_AF2122/97 DLRGATVDPVLWRTASLVGARVDVDQAVAFAAAHGLCLAGG--
Rv3361c|M.tuberculosis_H37Rv DLRGATVDPVLWRTASLVGARVDVDQAVAFAAAHGLCLAGG--
MAV_4327|M.avium_104 DLCGGAADPALWTTASLAGARVDVDQAVAFALAHGLRLDGGDG
MAB_3699c|M.abscessus_ATCC_199 DLRGARIDPTLWTTAALITAKVDLPQAIAFAAAHGLDVHGG--
** * ** :* :* : *::*: **:::* **** : .