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M. avium 104 MAV_3692 (rbfA)

annotation: ribosome-binding factor A
coordinates: 3818283 - 3818771
length: 162

PDPARARRLAKRINTIVASAIEFEIKDPGLDGVTIVDTKVTADLHDATVFYTVMGRTLDDEPDYGAAAAA
LERAKGALRTMVGAGTGVRFTPTLTFTRDTTSDSVARMDELLARARAADADLARVRSGAKPAGEADPYRE
SGSGVEPGRDGSIGDDDQPEY*

Operon Prediction Model: Genebank

Paralogs

species id gene e-value identity (len) annotation
M. avium 104 MAV_3692 rbfA - 100% (162) ribosome-binding factor A

Closest Orthologs (e-value cutoff: 1e-4)

species id gene e-value identity (len) annotation
M. bovis AF2122 / 97 Mb2863c rbfA 3e-64 77.91% (163) ribosome-binding factor A
M. gilvum PYR-GCK Mflv_4038 rbfA 3e-56 73.10% (145) ribosome-binding factor A
M. tuberculosis H37Rv Rv2838c rbfA 3e-64 77.91% (163) ribosome-binding factor A
M. leprae Br4923 MLBr_01555 rbfA 2e-65 80.62% (160) ribosome-binding factor A
M. abscessus ATCC 19977 MAB_3130c - 1e-53 72.54% (142) ribosome-binding factor A (RbfA)
M. marinum M MMAR_1895 rbfA 2e-68 84.42% (154) ribosome-binding factor a RbfA
M. smegmatis MC2 155 MSMEG_2629 rbfA 2e-56 68.55% (159) ribosome-binding factor A
M. thermoresistible (build 8) TH_2381 rbfA 8e-60 70.19% (161) PROBABLE RIBOSOME-BINDING FACTOR A RBFA (P15B PROTEIN)
M. ulcerans Agy99 MUL_2123 rbfA 2e-67 83.77% (154) ribosome-binding factor A
M. vanbaalenii PYR-1 Mvan_2315 rbfA 8e-56 70.86% (151) ribosome-binding factor A

CLUSTAL 2.0.9 multiple sequence alignment


MAV_3692|M.avium_104                MPDPARARRLAKRINTIVASAIEFEIKDPGLDGVTIVDTKVTADLHDATV
MLBr_01555|M.leprae_Br4923          MADQARARRLAKRICTIVASAIEFEIKDPGLDGVTIVDVKVTADLHDATV
MMAR_1895|M.marinum_M               MADPARARRLAKRITTIVASAIEYEIKDPGLVGVTITDAKVTADLHDATV
MUL_2123|M.ulcerans_Agy99           MADPARARRLAKRITTIVASAIEYEIKDPGLVGVTITDAKVTADLHDATV
Mb2863c|M.bovis_AF2122/97           MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATV
Rv2838c|M.tuberculosis_H37Rv        MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATV
Mflv_4038|M.gilvum_PYR-GCK          MPDPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVTNDLHDATL
Mvan_2315|M.vanbaalenii_PYR-1       MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVTNDLHDATL
MSMEG_2629|M.smegmatis_MC2_155      MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATL
TH_2381|M.thermoresistible__bu      MADPARAKRLAKRIAAIVATAIEYEIKDPRLKGITVTDAKVTGDLRDATL
MAB_3130c|M.abscessus_ATCC_199      MADPARARRLAKRIGAIVASAIEYEIKDPRLTMVTVTDTRVTNDLHDATV
                                    *.* ***:****** :***:***:***** *  :*:.*.:*: **:***:

MAV_3692|M.avium_104                FYTVMGRTLDDEPDYGAAAAALERAKGALRTMVGAGTGVRFTPTLTFTRD
MLBr_01555|M.leprae_Br4923          FYTVMGRTLEDAPDYTAATAALNRAKGTLRSKVGAGTGVRFTPTLTFIRD
MMAR_1895|M.marinum_M               YYTVMGPTLDDEPDYAAAAAALERAKGVLRTKVGAGTGVRFTPTLTFTRD
MUL_2123|M.ulcerans_Agy99           YYTVMGPTLDGEPDYAAAAAALERAKGVLRTKVGAGTGVRFTPTLTFTRD
Mb2863c|M.bovis_AF2122/97           YYTVMGRTLHDEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLD
Rv2838c|M.tuberculosis_H37Rv        YYTVMGRTLHDEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLD
Mflv_4038|M.gilvum_PYR-GCK          YYTVLGRSLDEEPDYEGAAAGLEKAKGVLRTKVGASLGVRFTPTLAFARD
Mvan_2315|M.vanbaalenii_PYR-1       YYTVLGRSLDEEPDYEGAAAGLEKAKGVLRTKVGASLGVRFTPTLAFARD
MSMEG_2629|M.smegmatis_MC2_155      YYTVLGASLDEDPDYEGAAAALEKAKGVLRTKVGAGTGVRFTPTLAFVRD
TH_2381|M.thermoresistible__bu      YYTVMGRTLDEEPDYDGAAAALEKAKGVLRSKVGAGTGVRYTPTLTFVRD
MAB_3130c|M.abscessus_ATCC_199      YYTVMGQTLSDEPDFAGAAAALDKAKGVLRTKVGAGTGVRFTPTLTFVLD
                                    :***:* :*   *:  .*:*.*::***.**: ***. ***:****:*  *

MAV_3692|M.avium_104                TTSDSVARMDELLARARAADADLARVRSGAKPAGEADPYRESG-------
MLBr_01555|M.leprae_Br4923          TTSDSVARMEELLARARAADADVAQVRLRAKPAGEADPYRDKGSV-----
MMAR_1895|M.marinum_M               VTSDTVHRMDELLARARAADADLARVRVGAKPAGEADPYRDRGSADEPSD
MUL_2123|M.ulcerans_Agy99           VTSDTVHRMDELLARARAADADLARVRVGAKPAGEADPYRDRGSVDEPSD
Mb2863c|M.bovis_AF2122/97           TISDSVHRMDELLARARAADADLARVRVGAKPAGEADPYRDNGSVAQSPA
Rv2838c|M.tuberculosis_H37Rv        TISDSVHRMDELLARARAADADLARVRVGAKPAGEADPYRDNGSVAQSPA
Mflv_4038|M.gilvum_PYR-GCK          TVPDAAHRMEALLAQARAADEDLARVREGAKHAGDSDPYRVLGEGDLEGP
Mvan_2315|M.vanbaalenii_PYR-1       TVPDTAHRMEALLAKARAADEDLARVRQGARHAGEADPYRVTG---AEDE
MSMEG_2629|M.smegmatis_MC2_155      TVPDAAHRMEELLARARAADEDLARVREGAKHAGDPDPYRVGG-------
TH_2381|M.thermoresistible__bu      TVPDAAHRMEELLARARAADADLARVRQNAKPAGDPDPYRMDGGTGEPGA
MAB_3130c|M.abscessus_ATCC_199      TMADSARHMEELLDRTRAADAALAEVRQGAVHAGDADPYKESA-------
                                    . .*:. :*: ** ::****  :*.**  *  **:.***:  .       

MAV_3692|M.avium_104                SGVEPGRDGS--------------IGDDDQPEY
MLBr_01555|M.leprae_Br4923          AGLVGVDIAD--------------IDDDDLTDD
MMAR_1895|M.marinum_M               AGGLVIRTSDGLEAEN--------TGDDYQAED
MUL_2123|M.ulcerans_Agy99           AGGLVIRTSDGLEAEN--------TGDDYQAED
Mb2863c|M.bovis_AF2122/97           PGGLGIRTSDGPEAVEAPLTCGGDTGDDDRPKE
Rv2838c|M.tuberculosis_H37Rv        PGGLGIRTSDGPEAVEAPLTCGGDTGDDDRPKE
Mflv_4038|M.gilvum_PYR-GCK          ATGGPDVEDEGG------------ANSHDR---
Mvan_2315|M.vanbaalenii_PYR-1       ASG--DAEDEGG------------SNSLDD---
MSMEG_2629|M.smegmatis_MC2_155      ------AEDTDG------------DTDGDER--
TH_2381|M.thermoresistible__bu      SRSGPDADDAEE------------SGDHHRRDR
MAB_3130c|M.abscessus_ATCC_199      ------AEEPAA------------YEDDERRPD
                                                              .

species	id	gene	e-value	identity (len)	annotation
M. avium 104	MAV_3692	rbfA	-	100% (162)	ribosome-binding factor A