For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ALPQLTDEQRAAALEKAAAARRARAELKDRLKRGGTNLSQVLKDAETDEVLGKMKVSALLEALPKVGKVK AQEIMTELEIAPTRRLRGLGDRQRKALLEKFGS*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_3386 | - | - | 100% (104) | MihF protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1423 | mihF | 2e-51 | 98.08% (104) | putative integration host factor MIHF |
| M. gilvum PYR-GCK | Mflv_3741 | - | 9e-50 | 98.04% (102) | MihF |
| M. tuberculosis H37Rv | Rv1388 | mihF | 2e-51 | 98.08% (104) | putative integration host factor MIHF |
| M. leprae Br4923 | MLBr_00540 | mihF | 7e-51 | 96.15% (104) | putative integration host factor |
| M. abscessus ATCC 19977 | MAB_2824c | - | 1e-47 | 93.14% (102) | putative integration host factor (MihF) |
| M. marinum M | MMAR_2201 | mihF | 1e-51 | 99.04% (104) | integration host factor MihF |
| M. smegmatis MC2 155 | MSMEG_3050 | - | 1e-49 | 98.04% (102) | integration host factor |
| M. thermoresistible (build 8) | TH_0820 | mIHF | 4e-47 | 97.94% (97) | PUTATIVE INTEGRATION HOST FACTOR MIHF |
| M. ulcerans Agy99 | MUL_1787 | mihF | 2e-51 | 98.08% (104) | integration host factor MihF |
| M. vanbaalenii PYR-1 | Mvan_2666 | - | 2e-50 | 99.02% (102) | MihF |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1423|M.bovis_AF2122/97 MLGNTIHVPCQPCRHGHGAPSRGLRGRPADRWPVARATPTLHVCPQNQGV
Rv1388|M.tuberculosis_H37Rv MLGNTIHVPCQPCRHGHGAPSRGLRGRPADRWPVARATPTLHVCPQNQGV
MLBr_00540|M.leprae_Br4923 --------------------------------------------------
MMAR_2201|M.marinum_M --------------------------------------------------
MUL_1787|M.ulcerans_Agy99 --------------------------------------------------
MAV_3386|M.avium_104 --------------------------------------------------
TH_0820|M.thermoresistible__bu --------------------------------------------------
MSMEG_3050|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_2666|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_3741|M.gilvum_PYR-GCK --------------------------------------------------
MAB_2824c|M.abscessus_ATCC_199 --------------------------------------------------
Mb1423|M.bovis_AF2122/97 GLDFVRKPEYGRLRWPAYPAGTNNDRLISMRDGGIVALPQLTDEQRAAAL
Rv1388|M.tuberculosis_H37Rv GLDFVRKPEYGRLRWPAYPAGTNNDRLISMRDGGIVALPQLTDEQRAAAL
MLBr_00540|M.leprae_Br4923 -----------------------------------MALPQLTDEQRAAAL
MMAR_2201|M.marinum_M -----------------------------MRDGGIVALPQLTDEQRAAAL
MUL_1787|M.ulcerans_Agy99 -----------------------------------MALPQLTDEQRAAAL
MAV_3386|M.avium_104 -----------------------------------MALPQLTDEQRAAAL
TH_0820|M.thermoresistible__bu ----------------------------------------LTDEQRAAAL
MSMEG_3050|M.smegmatis_MC2_155 -----------------------------------MALPQLTDEQRAAAL
Mvan_2666|M.vanbaalenii_PYR-1 -----------------------------------MALPQLTDEQRAAAL
Mflv_3741|M.gilvum_PYR-GCK -----------------------------------MALPQLTDEQRAAAL
MAB_2824c|M.abscessus_ATCC_199 -----------------------------------MALPQLTDEQRAAAL
**********
Mb1423|M.bovis_AF2122/97 EKAAAARRARAELKDRLKRGGTNLTQVLKDAESDEVLGKMKVSALLEALP
Rv1388|M.tuberculosis_H37Rv EKAAAARRARAELKDRLKRGGTNLTQVLKDAESDEVLGKMKVSALLEALP
MLBr_00540|M.leprae_Br4923 EKAAAARRARAELKDRLKRGGTNLTQVLKDAESDEVLGKMKVSALLEALP
MMAR_2201|M.marinum_M EKAAAARRARAELKDRLKRGGTNLTQVLKDAETDEVLGKMKVSALLEALP
MUL_1787|M.ulcerans_Agy99 EKAAAARRSRAELKDRLKRGGTNLTQVLKDAETDEVLGKMKVSALLEALP
MAV_3386|M.avium_104 EKAAAARRARAELKDRLKRGGTNLSQVLKDAETDEVLGKMKVSALLEALP
TH_0820|M.thermoresistible__bu EKAAAARRARAELKDRLKRGGTTLKQVLKDAETDEVLGKMKVSALLEALP
MSMEG_3050|M.smegmatis_MC2_155 EKAAAARRARAELKDRLKRGGTNLKQVLTDAETDEVLGKMKVSALLEALP
Mvan_2666|M.vanbaalenii_PYR-1 EKAAAARRARAELKDRLKRGGTNLKQVLKDAETDEVLGKMKVSALLEALP
Mflv_3741|M.gilvum_PYR-GCK EKAAAARRARAELKDRLKRGGTNLKQVLTDAETDEVLGKMKVSALLEALP
MAB_2824c|M.abscessus_ATCC_199 AKAAAARRARAELKEKLKKGGTNLKQVLTDAETDEVLGKMKVSALLEALP
*******:*****::**:***.*.***.***:*****************
Mb1423|M.bovis_AF2122/97 KVGKVKAQEIMTELEIAPTRRLRGLGDRQRKALLEKFGSA
Rv1388|M.tuberculosis_H37Rv KVGKVKAQEIMTELEIAPTRRLRGLGDRQRKALLEKFGSA
MLBr_00540|M.leprae_Br4923 KVGKVKAQEIMTELDIAPTRRLRGLGERQRKALLEKFGSA
MMAR_2201|M.marinum_M KVGKVKAQEIMTELEIAPTRRLRGLGDRQRKALLEKFGSA
MUL_1787|M.ulcerans_Agy99 KVGKVKAQEIMTELEIAPTRRLRGLGDRQRKALLEKFGSA
MAV_3386|M.avium_104 KVGKVKAQEIMTELEIAPTRRLRGLGDRQRKALLEKFGS-
TH_0820|M.thermoresistible__bu KVGKVKAQEIMTELEIAPTRRLRGLGDRQRKALLEKFDQA
MSMEG_3050|M.smegmatis_MC2_155 KVGKVKAQEIMTELEIAPTRRLRGLGDRQRKALLEKFDQS
Mvan_2666|M.vanbaalenii_PYR-1 KVGKVKAQEIMTELEIAPTRRLRGLGDRQRKALLEKFDFS
Mflv_3741|M.gilvum_PYR-GCK KVGKVKAQEIMTELEIAPTRRLRGLGDRQRKALLEKFDFS
MAB_2824c|M.abscessus_ATCC_199 KVGKVKAQEIMTELEIAPTRRLRGLGDRQRKALLERFDFS
**************:***********:********:*.