For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TTVDLTAEKFNETIEGNDIVLVDFWASWCGPCRQFGPTFQASSEKHPDIVHAKVDTEAEQQLAAAAQIRS IPTLMAFKKGKLLFNQPGALPPAALEDLVQQVRAFDVDAAIAEQGE*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_3308 | trx | - | 100% (117) | thioredoxin |
M. avium 104 | MAV_5302 | trx | 3e-14 | 37.76% (98) | thioredoxin |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1506 | trxB1 | 2e-48 | 76.99% (113) | thioredoxin TRXB1 |
M. gilvum PYR-GCK | Mflv_3670 | - | 5e-48 | 76.52% (115) | thioredoxin |
M. tuberculosis H37Rv | Rv1471 | trxB1 | 2e-48 | 76.99% (113) | thioredoxin TRXB1 |
M. leprae Br4923 | MLBr_01818 | trxB | 1e-35 | 67.29% (107) | thioredoxin |
M. abscessus ATCC 19977 | MAB_2739c | - | 1e-47 | 74.78% (115) | thioredoxin TrxB |
M. marinum M | MMAR_2277 | trxB1 | 1e-48 | 80.56% (108) | thioredoxin TrxB1 |
M. smegmatis MC2 155 | MSMEG_3138 | trx | 3e-51 | 77.39% (115) | thioredoxin |
M. thermoresistible (build 8) | TH_0249 | trxB | 2e-50 | 77.39% (115) | PROBABLE THIOREDOXIN TRXB1 |
M. ulcerans Agy99 | MUL_1479 | trxB1 | 1e-47 | 78.70% (108) | thioredoxin TrxB1 |
M. vanbaalenii PYR-1 | Mvan_2740 | - | 8e-52 | 80.87% (115) | thioredoxin |
CLUSTAL 2.0.9 multiple sequence alignment Mb1506|M.bovis_AF2122/97 -----------MTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPT Rv1471|M.tuberculosis_H37Rv -----------MTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPT MMAR_2277|M.marinum_M --------MADMATQDLTAAKFSETVNDNDMVLVDFWASWCGPCRAFAPT MUL_1479|M.ulcerans_Agy99 -----------MATQDLTAAKFSETVNDNDMVLVDFWASWCGPCRALAPT MSMEG_3138|M.smegmatis_MC2_155 -----------MSTLDITAEQFNDTVNDNEIVLVDFWASWCGPCKAFAPT TH_0249|M.thermoresistible__bu -----------VSAIDITADQFNETIQENEIVLVDFWASWCGPCRQFAPT MAB_2739c|M.abscessus_ATCC_199 -----------MATRDITADAFNDLIHDNDIVLVDFWASWCGPCRQFGPV Mflv_3670|M.gilvum_PYR-GCK -----------MATKDITAEEFEKTIKDNDIVLVDFWASWCGPCKAFAPT Mvan_2740|M.vanbaalenii_PYR-1 -----------MATRDITAQEFNDTINDNDIVLVDFWASWCGPCKAFAPT MAV_3308|M.avium_104 -----------MTTVDLTAEKFNETIEGNDIVLVDFWASWCGPCRQFGPT MLBr_01818|M.leprae_Br4923 MVREHGVGVRRWTRRDLIAEQLNETINVNNMVLVAFWASWCGPDRLFVPT : *: * :.. :. .::*** :******* : : *. Mb1506|M.bovis_AF2122/97 FAESSEKHPDVVHAKVDTEAERELAAAAQIRSIPTIMAFKNGKLLFNQAG Rv1471|M.tuberculosis_H37Rv FAESSEKHPDVVHAKVDTEAERELAAAAQIRSIPTIMAFKNGKLLFNQAG MMAR_2277|M.marinum_M FQASSEAHPDVVYAKVDTEAEQELAAAAQIRSIPTLMAFKKGKLLFNQPG MUL_1479|M.ulcerans_Agy99 FQASSEAHPDVVYAKVDTEAEQELAAAAQIRSIPTLMSFKKGKLLFNQPG MSMEG_3138|M.smegmatis_MC2_155 FAASAEKHPDVVHAKVDTEAEQALAAAADIRSIPTLMAFKKGKLVFNQAG TH_0249|M.thermoresistible__bu FEASAQKHPDVVHAKVDTEAEQALAAAADIRSIPTLMAFKKGYLVFNQAG MAB_2739c|M.abscessus_ATCC_199 FEASSEANPDVVHAKVDTEAEQALASAANIRSIPTLMAFKQGQLVFNQAG Mflv_3670|M.gilvum_PYR-GCK FAASSEKHPDIVYAKVDTEAEQQLAAAADIRAIPTLMAFKKGTPVLNRAG Mvan_2740|M.vanbaalenii_PYR-1 FAASSEKHPDVVYAKVDTEAEQQLAAAADIRSIPTLMAFKKGKLVFNQAG MAV_3308|M.avium_104 FQASSEKHPDIVHAKVDTEAEQQLAAAAQIRSIPTLMAFKKGKLLFNQPG MLBr_01818|M.leprae_Br4923 FHASSNKHSDVVHLNVDTKAERQLALAAQIRSIPTLVAFKKGKPLLSQAG * *:: :.*:*: :***:**: ** **:**:***:::**:* ::.:.* Mb1506|M.bovis_AF2122/97 ALPPAALESLVQQLKAYEVEAGEATTQNGRAQQA- Rv1471|M.tuberculosis_H37Rv ALPPAALESLVQQLKAYEVEAGEATTQNGRAQQA- MMAR_2277|M.marinum_M ALPAAALEDLVQQLKSYEVV--------------- MUL_1479|M.ulcerans_Agy99 ALPAAALEDLVQQLKSYEVV--------------- MSMEG_3138|M.smegmatis_MC2_155 ALPPAALEDLVQKIKEFDIDAAMREQAAQGGAEEV TH_0249|M.thermoresistible__bu ALPPPALEELVQKVRELDIDAAIAAQQNAEQSGE- MAB_2739c|M.abscessus_ATCC_199 ALPPASLADLVQQVRDLDVEAALREQEA------- Mflv_3670|M.gilvum_PYR-GCK ALPPAALEDLIQQIRDLDVDAAIAAQEDGQS---- Mvan_2740|M.vanbaalenii_PYR-1 ALPPAALEDLIQQVKDFDIDAAIAAQDNGQG---- MAV_3308|M.avium_104 ALPPAALEDLVQQVRAFDVDAAIAEQGE------- MLBr_01818|M.leprae_Br4923 DLTPAVPGYLVQQIKAFDVSDDGVVPDEQV----- *... *:*::: ::