For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GLLIRVAELLILVLPLVGATVAVVRAFGAQRRRTDEPAREVDGARPPEARAGADNQAARWRSIRRVLDEH SRTDERWLDYELDVAKLLDFPLMTDMRDPLTIAFHKAKLRADFLRPAKAEDLLDDPDAASHYLAAVEDYV TAFNAAEAEATRRRRTDFSRTDQQRIARAQSLFRVAADPAAAAHERQRAYDVARHELEGLLVLPPATRAN IERAISGEIES*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_2776 | - | - | 100% (222) | hypothetical protein MAV_2776 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1777 | - | 4e-75 | 62.61% (222) | hypothetical protein Mb1777 |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv1748 | - | 4e-75 | 62.61% (222) | hypothetical protein Rv1748 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2378c | - | 2e-05 | 28.77% (212) | hypothetical protein MAB_2378c |
| M. marinum M | MMAR_2624 | - | 2e-72 | 62.56% (227) | hypothetical protein MMAR_2624 |
| M. smegmatis MC2 155 | MSMEG_3344 | - | 3e-06 | 29.61% (179) | hypothetical protein MSMEG_3344 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_3138 | - | 1e-70 | 61.23% (227) | hypothetical protein MUL_3138 |
| M. vanbaalenii PYR-1 | Mvan_5777 | - | 1e-63 | 57.47% (221) | hypothetical protein Mvan_5777 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1777|M.bovis_AF2122/97 ---------------------MPGGVCSGRPWGR--------PWWHPGLV
Rv1748|M.tuberculosis_H37Rv ---------------------MPGGVCSGRPWGR--------PWWHPGLV
MMAR_2624|M.marinum_M -------------------------------------------------M
MUL_3138|M.ulcerans_Agy99 -------------------------------------------------M
MAV_2776|M.avium_104 -------------------------------------------------M
Mvan_5777|M.vanbaalenii_PYR-1 ---------------------MAANRNTQFRLAANALITVLPGWWHAGSM
MAB_2378c|M.abscessus_ATCC_199 MNCAEGAVTVPVTARTEYVTRRHRWSALAAGAVLASGLIALTGLNYAGAS
MSMEG_3344|M.smegmatis_MC2_155 MDCTEDVPVVSVTARTEYSTERHRASATTAAIAFASGLIALVAFNFLGLA
Mb1777|M.bovis_AF2122/97 GLLIRLAELLVVMLPLIGVLYVGIKALSSFTRRLGEASGDLASDSP----
Rv1748|M.tuberculosis_H37Rv GLLIRLAELLVVMLPLIGVLYVGIKALSSFTRRLGEASGDLASDSP----
MMAR_2624|M.marinum_M GLLFRLVELLVLIAPIVGLIYAGIRAISSLNRRSGDGAVDHAPQDR----
MUL_3138|M.ulcerans_Agy99 GLLFRLVELLVLIASIVGLIYAGIRAISSLNRRSGDGAVDHAPQDR----
MAV_2776|M.avium_104 GLLIRVAELLILVLPLVGATVAVVRAFGAQRRRTDEPAREVDGARP----
Mvan_5777|M.vanbaalenii_PYR-1 GLVIRLLELMLVLVPLIGAAYAAFRGVTALRAR-------QTAELP----
MAB_2378c|M.abscessus_ATCC_199 GALTGSVVAVLITVGLAAVAYGRLGAPGAVQLTVDRDTVHFGDETHGVVS
MSMEG_3344|M.smegmatis_MC2_155 PALTSIVVAALITIALGTATYGRLKPPGAVQITVGDSTVSFGDESAEFTS
: :: : . :
Mb1777|M.bovis_AF2122/97 --------------------------------------------------
Rv1748|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_2624|M.marinum_M --------------------------------------------------
MUL_3138|M.ulcerans_Agy99 --------------------------------------------------
MAV_2776|M.avium_104 --------------------------------------------------
Mvan_5777|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_2378c|M.abscessus_ATCC_199 YQLASLVAMSQDGPASETLVDMDIRRLMVRGQKYLTLTFATDGGDDEWRV
MSMEG_3344|M.smegmatis_MC2_155 RPLSSLIAVDLAGPADETTP--DPRRLTVRTQEYLVLTFASDTGHDEWRV
Mb1777|M.bovis_AF2122/97 -------------------------------AMPRP--TTVENDAARWRA
Rv1748|M.tuberculosis_H37Rv -------------------------------AMPRP--TTVENDAARWRA
MMAR_2624|M.marinum_M -------------------------------AAGQPDDALPGSKPAQWRA
MUL_3138|M.ulcerans_Agy99 -------------------------------AAGQPDDALPGSKPAQWRA
MAV_2776|M.avium_104 -------------------------------PEARAG---ADNQAARWRS
Mvan_5777|M.vanbaalenii_PYR-1 -------------------------------QAADP-------AAAQRRA
MAB_2378c|M.abscessus_ATCC_199 AVVGSDPAVTHIVSRIHAALSESPPGDVPSDFGSGARIADAGTDEAAKRL
MSMEG_3344|M.smegmatis_MC2_155 AVVKSDPAAAEVFRRLTMALPEAHKRGSSTTARSAARVADAGSDEAARRL
. * *
Mb1777|M.bovis_AF2122/97 ITRAVEAHERTDARWLEYELDAAKLLDFPVMTDMRDPLTTAFHKAKLQAD
Rv1748|M.tuberculosis_H37Rv ITRAVEAHERTDARWLEYELDAAKLLDFPVMTDMRDPLTTAFHKAKLQAD
MMAR_2624|M.marinum_M IRRAIDAHDETNTRWLDYELDVAKLLDFPVMTDMRDPITTRFHKAKLAAD
MUL_3138|M.ulcerans_Agy99 IRRAIDAHDETNTRWLDYELDVAKLLDFPVMTDMRDPITTRFHKAKLAAD
MAV_2776|M.avium_104 IRRVLDEHSRTDERWLDYELDVAKLLDFPLMTDMRDPLTIAFHKAKLRAD
Mvan_5777|M.vanbaalenii_PYR-1 IGRAIEEHDRTDTRWLEYELDVAKLLDCPLMTDLRDPLTERFHRAKLRAD
MAB_2378c|M.abscessus_ATCC_199 WEYACQRHDDILGAYGAYELDPASLLRYPAITDVTAEPTQMFHVALDRAQ
MSMEG_3344|M.smegmatis_MC2_155 WEEATRRHDDVLGAYGAYELDPAMLLRYPAVTDVTVESTQTFHIALDEAQ
. *. : **** * ** * :**: * ** * *:
Mb1777|M.bovis_AF2122/97 FHKPLRAEDLLDDPDAAGHYLDAVRDYVTAFDTAEAEAMRRRRTGFSREE
Rv1748|M.tuberculosis_H37Rv FHKPLRAEDLLDDPDAAGHYLDAVRDYVTAFDTAEAEAMRRRRTGFSREE
MMAR_2624|M.marinum_M FHRPMRAEDLLDDRDAAKEYFDAVQNYVTAFNAAEAEAMRRRRSDFSREG
MUL_3138|M.ulcerans_Agy99 FHRPMRAEDLLDDRDAAKEYFDAVQNYVIAFNAAEAEAMRRRRSDFSREG
MAV_2776|M.avium_104 FLRPAKAEDLLDDPDAASHYLAAVEDYVTAFNAAEAEATRRRRTDFSRTD
Mvan_5777|M.vanbaalenii_PYR-1 FLRPGGIADLVDDRDATRDYLNAVQEYVTAFDIAEAEALRRRRADFTPAE
MAB_2378c|M.abscessus_ATCC_199 ALR---TEAYPGNRSLADAYGQAVVALRRAWIACESYGKKVGTSYLEPAD
MSMEG_3344|M.smegmatis_MC2_155 ALR---TDGYPGDRGLADAYQQTVARLRRAWIACESHGRRVGTSYLETAD
: .: . : * :* *: .*: . : : :
Mb1777|M.bovis_AF2122/97 QQRLARAQSLLRVASDAGATAQERE---RAYRLARTELD-GLIVLPDRTR
Rv1748|M.tuberculosis_H37Rv QQRLARAQSLLRVASDAGATAQERE---RAYRLARTELD-GLIVLPDRTR
MMAR_2624|M.marinum_M QQRLARAQSLLRVAADSSATAQERS---RAYDLACNELD-GLMVLPGTTR
MUL_3138|M.ulcerans_Agy99 QQRLARAQSLLRVAADSSATAQERS---RAYDLACNELD-GFMVLPGTTR
MAV_2776|M.avium_104 QQRIARAQSLFRVAADPAAAAHERQ---RAYDVARHELE-GLLVLPPATR
Mvan_5777|M.vanbaalenii_PYR-1 QERLARAQRLLRVAADSAATPQERQ---RAYRLARRELD-GLVVLPDGAR
MAB_2378c|M.abscessus_ATCC_199 RTEMGTAVKLYNHAISGATPAEQAAYYGRVRDIITKLVERGVLHPPKVQL
MSMEG_3344|M.smegmatis_MC2_155 QSELDTALKLYHHAASSTTAAEQATYYGRVREIITRLTHRGALHLPEAQL
: .: * * . * . :...: *. : . * : *
Mb1777|M.bovis_AF2122/97 AGIERGIAGELDD----
Rv1748|M.tuberculosis_H37Rv AGIERGIAGELDD----
MMAR_2624|M.marinum_M ASIERGIAGEIDG----
MUL_3138|M.ulcerans_Agy99 ASIERGIAGEIDG----
MAV_2776|M.avium_104 ANIERAISGEIES----
Mvan_5777|M.vanbaalenii_PYR-1 VALERGISGELD-----
MAB_2378c|M.abscessus_ATCC_199 AQLEAVTRRAIEAAQPT
MSMEG_3344|M.smegmatis_MC2_155 KQLEAVTRRAIEAAESD
:* ::