For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSANWGRARAVADAVLYEGYLLYPYRATSSKNESRWQFGVLGPPGAADAGIGEDDSLSAQFLVDHAEAIT LVVRFLHLQHRGAERDTGHGRFEPVGELTAGASSWLTWDEAVETELSFGPLDLTGTQHQWTLPVAAPAAT DIEPLVGGRLVRTREDVSAALSVSVEHDDGLDLVTVAVRNTGAAVDGTSDKDSTIARSLIGTHIIAEAIG GEFISLLETPEHAAAAAARCRQHRCFPVLAGALGEHDLLLVSPIILYDHPEVAEQSEGALYDSTEIDEIL TLRVMTMTDQEKAQARATDPLAAEIIDRCDAMSPEAMQRMHGVLRDPHTGYPASDTGLIPEIPDGLGWWD PEADNAVRPDVDAILINGVRVARGSRVRLHPGRRADAQDLFVDGKSARVTSVHEDVDGNQHVGVVVDDDP DADLHDWYGRYLYFAPDEVEPLEAHPTGTERNPTWR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_2686 | - | - | 100% (456) | hypothetical protein MAV_2686 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_1865 | - | 0.0 | 70.24% (457) | hypothetical protein MMAR_1865 |
M. smegmatis MC2 155 | MSMEG_2715 | - | 1e-150 | 60.49% (448) | hypothetical protein MSMEG_2715 |
M. thermoresistible (build 8) | TH_1949 | - | 1e-168 | 65.52% (464) | conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_2410 | - | 1e-170 | 68.47% (444) | hypothetical protein Mvan_2410 |
CLUSTAL 2.0.9 multiple sequence alignment MAV_2686|M.avium_104 MSANWGRARAVADAVLYEGYLLYPYRATSSKNESRWQFGVLGPPGAADAG MMAR_1865|M.marinum_M MTSNRDRARAVADAVLYEGYLLYPYRGTSSKNQSRWQFGVLGPPGAADAG Mvan_2410|M.vanbaalenii_PYR-1 MSTGWDRARAVADAVLYEGYLLYPYRATSGKNQSRWQFGVLGPPGAEQSG TH_1949|M.thermoresistible__bu MSSDEDRVRAVADAVLYEGYLLYPYRADSRKNQTRWQFGVLGPPGAQAAG MSMEG_2715|M.smegmatis_MC2_155 MSTATEQVLAVADAVLYEGYLLYPYRGDAAKNQCRWQWGVLGPEGAESAG *:: :. *****************. : **: ***:***** ** :* MAV_2686|M.avium_104 IGEDDSLSAQFLVD--HAEAITLVVRFLHLQHRGAER----DTGHGRFEP MMAR_1865|M.marinum_M LGEDDTLAAEFLVE--GTQAITVAVRFLQLQHRRAER----EIN-GAFEA Mvan_2410|M.vanbaalenii_PYR-1 VGEHDALSAQVLVRPLGEPTVSGVVRFLQLQHRGVER----DLG-DRYEP TH_1949|M.thermoresistible__bu IGENDSLATQFLVYSGPATTLTLTVRFLQLQHRSAER----ATA-TGYTP MSMEG_2715|M.smegmatis_MC2_155 IGEDSSMSAQLLVRGDGRARLSVTVRFLQLQHRSAERRHLDDAAHESFVP :**..:::::.** :: .****:**** .** : . MAV_2686|M.avium_104 VGELTAGASSWLTWDEAVETELSFGPLDLTGTQHQWTLPVAAPAATDIEP MMAR_1865|M.marinum_M VDELATPSGSWLTWDEAVECEMSFGPLAFDDPDQPWQLPVLAPAATDIEE Mvan_2410|M.vanbaalenii_PYR-1 VGELQAGAHRWLRWDEAVECEVAIDAVPVP--ALPRVVEIGVPAGNDVET TH_1949|M.thermoresistible__bu VRALTAGDRSWLSWDEAVEHELRFGPLPLT--AAPLRHRISVPDGADVES MSMEG_2715|M.smegmatis_MC2_155 VDELVSTAGSWLSWDEAVAQQVTLGPFDVDDLTTSRTHPIIVEGGREIET * * : ** ***** :: :... . : . . ::* MAV_2686|M.avium_104 LVGGRLVRTREDVSAALSVSVEH----DDGLDLVTVAVRNTGAAVDGTSD MMAR_1865|M.marinum_M VEGGRLVRQRREVRGELTVSSQS----DGDLRRVSLRLRNVGPPVDPVTE Mvan_2410|M.vanbaalenii_PYR-1 VDGGRLVRTRRSLRAALSMSVEP----DDGLLRLTVEVRNTAAPVA---- TH_1949|M.thermoresistible__bu VTGGRLVRSRRALHGELTVTAEPGTAPGRELRVVEVTVRNTGTPTTD--- MSMEG_2715|M.smegmatis_MC2_155 VEGGRLVRTRRALCGELLLRAEP----DGDLFRVTMTVRNRAAPVED--- : ****** *. : . * : : . * : : :** .... MAV_2686|M.avium_104 -KDSTIARSLIGTHIIAEAIGGEFISLLETPEHAAAAAARCRQHRCFPVL MMAR_1865|M.marinum_M GKDSVIARSMIGSHMIAEVIGGQFVSLLEPAPAAADAVSRCTQHRCFPVL Mvan_2410|M.vanbaalenii_PYR-1 DKDEAIATSLIGTHLLLEVDGGEFVSLLEPPDPAAAAAGRCRQHRCFPVL TH_1949|M.thermoresistible__bu -RDDAIARSLIGAHVIARTGDGEFVSLLDPPAHAAAAAASCRQHRCFPVL MSMEG_2715|M.smegmatis_MC2_155 -RQSATAVSFLGTHLIAEIDDGEFVSLLEPDDRAAEAVSRCERHRCFPVL ::.. * *::*:*:: . .*:*:***:. ** *.. * :******* MAV_2686|M.avium_104 AGALGEHDLLLVSPIILYDHPEVAEQSEGALYDSTEIDEILTLRVMTMTD MMAR_1865|M.marinum_M AGPPGTQDLLLISPIILYDHPEVAEQSNTALYDCTEIDEILTLRVMTMTD Mvan_2410|M.vanbaalenii_PYR-1 AGPPGAHHLMLVSPIILYDHPEIAEQSKGDLYDACEIDEILTLRIMTMTE TH_1949|M.thermoresistible__bu AGPPGTRDLLLVSPIILYDHPEIAEQSRTSLYDSTEIDEILTLRVMTLTD MSMEG_2715|M.smegmatis_MC2_155 AGPDGTRDLMLVSPIILYDHPQIAAQSRGALYDSCEIDEILTLRVMALTD **. * :.*:*:*********::* **. ***. *********:*::*: MAV_2686|M.avium_104 QEKAQARATDPLAAEIIDRCDAMSPEAMQRMHGVLRDPHTGYPASDTGLI MMAR_1865|M.marinum_M EEKAQARATDPRAAQIIDQCDAMSPEAMARLHGVLRDPHA-----VSGLV Mvan_2410|M.vanbaalenii_PYR-1 EEKAAARATDTRAAEIIDRCDSMSPEAMLGLHGVLRDPHA----AAPPLI TH_1949|M.thermoresistible__bu EEKAVARATDPLAAQLIDRCDSMSPEDLLRLHGVLRDPHAG--APPPTLI MSMEG_2715|M.smegmatis_MC2_155 EEKLLARATDPLAAQIIDRCDAMSAEAMLDLHGVLRTTDDE----RSSLL :** *****. **::**:**:**.* : :***** .. . *: MAV_2686|M.avium_104 PEIPDGLGWWDPEADNAVRPDVDAILINGVRVARGSRVRLHPGRRADAQD MMAR_1865|M.marinum_M PELPEGVDWWDPMADNAVRPELDGVLVNGVRVARGSRVRLHPRRNADAQD Mvan_2410|M.vanbaalenii_PYR-1 PEIPADVDWWDPEADNAVHPESDAVLVNGARVARGSRVRLHPSRRADAQD TH_1949|M.thermoresistible__bu PEVPDGIDWWDPSADTAVDPGLDAVLVDGVAVRRGSRVRLRPSRRADAQD MSMEG_2715|M.smegmatis_MC2_155 PEVPDGVPWWDPLADNAVDPAVDAVLVNGVAVSRGCRVRLHPSRRADAQD **:* .: **** **.** * *.:*::*. * **.****:* *.***** MAV_2686|M.avium_104 LFVDGKSARVTSVHEDVDGNQHVGVVVDDDPDADLHDWYGRYLYFAPDEV MMAR_1865|M.marinum_M IFVAGKIARVTSVHEDVEGNRHVGVVVEDDPAADLHDWYGRYLYFSPDEV Mvan_2410|M.vanbaalenii_PYR-1 LFYADRIARVMSVHADVEGGSHIGVVLDDDPAADLHDWYGRYLYFAPDEV TH_1949|M.thermoresistible__bu LFFAGRTAQVTSVHQDVDGATHIGVVLDDDPAAELHDWYGRYLYFAPDEV MSMEG_2715|M.smegmatis_MC2_155 LFFDNRIAWVASIHEDVDGERHVGVVLDDDPAADLHDWYGRYLYFAPDEI :* .: * * *:* **:* *:***::*** *:***********:***: MAV_2686|M.avium_104 EPLEAH--PTGTERNPTWR- MMAR_1865|M.marinum_M EPLESE--QTSNERSSIWRS Mvan_2410|M.vanbaalenii_PYR-1 EPL--------VERSQ---- TH_1949|M.thermoresistible__bu EPLTDTREDTREERSPTWK- MSMEG_2715|M.smegmatis_MC2_155 EPI----------------- **: