For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VNAANWFELVMSIAFVALMVWVVIDTRRRGELGFVGLLAIAGFSIFWQEFYADWGAYLLWSPDYHMLPWG STTWTTPDKPAMNIVSYPVFMTAAFLSMLALQNWARARWPRVHPLVLSLVTAGPVLVGFNLVMEYVSVET FGLWTYVDTVGPVLHSDAGTMPLLYPNIPFGLFGAVTAFLIGWTNEEGRPRFEALIAKPGLAQGLKRDLL RAVAWVLTFNATYWLFLITPTIVVRLAFGEPSALVP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_1860 | - | - | 100% (246) | hypothetical protein MAV_1860 |
M. avium 104 | MAV_2655 | - | 4e-13 | 24.48% (286) | hypothetical protein MAV_2655 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_4146 | - | 2e-05 | 25.40% (189) | hypothetical protein Mflv_4146 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4195 | - | 2e-05 | 24.38% (242) | hypothetical protein Mvan_4195 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4146|M.gilvum_PYR-GCK --------------------MGGELS--PALIAGLS-FAYIG-------- Mvan_4195|M.vanbaalenii_PYR-1 MQPAGSAAPPTASTIVKGKPIMSDLSRKPAVTESVSGTADLGKQGPSQSN MAV_1860|M.avium_104 ---------------------MNAANWFELVMS----------------- . . : Mflv_4146|M.gilvum_PYR-GCK --------GVVFLAFGVYLSIR-----------RGRLHPLLLVSISAIS- Mvan_4195|M.vanbaalenii_PYR-1 AFKVWATVGAVFLAYTLYVFIRWVSGPYFEPVAGGPSEPPLYMKIPLMAN MAV_1860|M.avium_104 ---------IAFVALMVWVVID-----------TRRRGELGFVGLLAIAG .*:* ::: * : : :: Mflv_4146|M.gilvum_PYR-GCK --FSWIEAPYDWAVYAQFP------------------------PELPRMP Mvan_4195|M.vanbaalenii_PYR-1 AVVLWIGLPFALWFFLIRPWVREKRITLDGMLLVSMGLMMFQDPMLNYYS MAV_1860|M.avium_104 FSIFWQEFYADWGAYLLWS------------------------PDYHMLP . * : . * . Mflv_4146|M.gilvum_PYR-GCK SWWPMN------MTWGG----GLPSAVP----------------IGYIAY Mvan_4195|M.vanbaalenii_PYR-1 TWCTYNAWLFNQGSWAP----HIPGWVAHEEPGHTVPEPLLTNIPGYMYG MAV_1860|M.avium_104 -WGSTT--------WTTPDKPAMN-------------------IVSYPVF * . . * : .* Mflv_4146|M.gilvum_PYR-GCK FVLPAVIGAALGRRVIARFGWRRPQTLLIVGF-LVGFGWALLFNGFFGPR Mvan_4195|M.vanbaalenii_PYR-1 VLLLTIVGCALMRKIKNRWPGISNLRLVLVTY-AVAIVFDFIMEGLILLP MAV_1860|M.avium_104 MTAAFLSMLALQNWARARWPRVHPLVLSLVTAGPVLVGFNLVMEYVSVET . : ** . *: * :* * . : :::: . Mflv_4146|M.gilvum_PYR-GCK LGVFVYGYVIDGLAIFEGSRYQYPVYDAVAMGLQMMVFTYLLGRVDEQGR Mvan_4195|M.vanbaalenii_PYR-1 IGFYSYPGAIQELSINAGTYYQYPIYEGFMWGGVQAALCCLRFFTDDRGR MAV_1860|M.avium_104 FGLWTYVDTVG-PVLHSDAGTMPLLYPNIPFGLFGAVTAFLIGWTNEEGR :*.: * .: : .: :* . * . * .::.** Mflv_4146|M.gilvum_PYR-GCK NVIEVWSDRRSS------------------------SKIGSSLLSIAAVV Mvan_4195|M.vanbaalenii_PYR-1 TVVERGLDRVRGGFVKQQFVRFLAIFGGVSACFFLFYNVPATWLGMQGDP MAV_1860|M.avium_104 PRFEALIAKPGLA-----------------------QGLKRDLLRAVAWV .* : : * . Mflv_4146|M.gilvum_PYR-GCK VVGHLMYGAVFAP----------------HLATKLGGYVTEG-----PTE Mvan_4195|M.vanbaalenii_PYR-1 WPEDVQKRSYFNPGICGEGTDRPCPNPDLPLPTKHSGYVNHDGELVLPEG MAV_1860|M.avium_104 LTFNATYWLFLIT------------------PTIVVRLAFGE------PS . : . .* . Mflv_4146|M.gilvum_PYR-GCK QLWPPIENQPR------- Mvan_4195|M.vanbaalenii_PYR-1 VEIPPVVPIQRPNSDDSQ MAV_1860|M.avium_104 ALVP-------------- *