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M. avium 104 MAV_1294 (-)

annotation: base excision DNA repair protein, HhH-GPD family protein
coordinates: 1239429 - 1240004
length: 191

VPKLQLVQEPAADALLDENPFALLVGMLLDQQVPIETAFAGPKKIADRMGGLDAATIADYDPDKFAALCS
ERPAIHRFPGSMAKRIQALAQLLVDRYGGDAAALWTAGEPDGKELLRRLKGLPGFGEQKARIFLALLGKQ
YGVTPPGWREAAGEFGKAGTYLSVADIVDARSLGQVRSYKKQMKAAAKAAK

Operon Prediction Model: Genebank

Paralogs

species id gene e-value identity (len) annotation
M. avium 104 MAV_1294 - - 100% (191) base excision DNA repair protein, HhH-GPD family protein

Closest Orthologs (e-value cutoff: 1e-4)

species id gene e-value identity (len) annotation
M. bovis AF2122 / 97 Mb1187 - 3e-93 88.36% (189) hypothetical protein Mb1187
M. gilvum PYR-GCK Mflv_2147 - 2e-79 73.82% (191) HhH-GPD family protein
M. tuberculosis H37Rv Rv1156 - 3e-93 88.36% (189) hypothetical protein Rv1156
M. leprae Br4923 - - - - -
M. abscessus ATCC 19977 MAB_1302 - 2e-79 73.80% (187) hypothetical protein MAB_1302
M. marinum M MMAR_4296 - 8e-96 87.43% (191) hypothetical protein MMAR_4296
M. smegmatis MC2 155 MSMEG_5156 - 1e-83 76.96% (191) base excision DNA repair protein, HhH-GPD family protein
M. thermoresistible (build 8) TH_0478 - 1e-81 74.35% (191) CONSERVED HYPOTHETICAL PROTEIN
M. ulcerans Agy99 MUL_1002 - 1e-90 84.57% (188) hypothetical protein MUL_1002
M. vanbaalenii PYR-1 Mvan_4556 - 1e-78 73.30% (191) HhH-GPD family protein

CLUSTAL 2.0.9 multiple sequence alignment


Mb1187|M.bovis_AF2122/97            MPNLQLVQEPAADALLNANPFALLVGMLLDQQVPMETAFAGPKKIADRMG
Rv1156|M.tuberculosis_H37Rv         MPNLQLVQEPAADALLNANPFALLVGMLLDQQVPMETAFAGPKKIADRMG
MAV_1294|M.avium_104                MPKLQLVQEPAADALLDENPFALLVGMLLDQQVPIETAFAGPKKIADRMG
MMAR_4296|M.marinum_M               MPKLQLVQDPAADALLESNPFALLVGMLLDQQVPMETAFAGPKKIADRMG
MUL_1002|M.ulcerans_Agy99           -MNLCLAQDPEADELLSNNPFALLVGMLLDQQVPMETAFAGPKKIADRMG
Mflv_2147|M.gilvum_PYR-GCK          MAKLQLVQDPAADELLEANPFALLVGMLLDQQIPMEVAFAGPKKIADRMG
Mvan_4556|M.vanbaalenii_PYR-1       MAKLKLVQEPAADALLEGNPFALLVGMLLDQQIPMEVAFGGPKKIADRMG
TH_0478|M.thermoresistible__bu      VAKLQLVQDPAADALLESDPFALLLGMLLDQQIPMEVAFAGPKKLADRLG
MSMEG_5156|M.smegmatis_MC2_155      MPTLQLVQDPDADALLESNPFALLVGMLLDQQIPMETAFAGPKKLADRIG
MAB_1302|M.abscessus_ATCC_1997      MARLQLAQDPAADELLEDNPLALLIAMLLDQQIPMEVAFAGPKKIADRIG
                                       * *.*:* ** **. :*:***:.******:*:*.**.****:***:*

Mb1187|M.bovis_AF2122/97            SFDAGDIADYDPDKFVALCSERPAIHRFPGSMAKRIQALAQIIVDRYDGD
Rv1156|M.tuberculosis_H37Rv         SFDAGDIADYDPDKFVALCSERPAIHRFPGSMAKRIQALAQIIVDRYDGD
MAV_1294|M.avium_104                GLDAATIADYDPDKFAALCSERPAIHRFPGSMAKRIQALAQLLVDRYGGD
MMAR_4296|M.marinum_M               GLDAGDIADYDPDKFAALCSEKPAIHRFPGSMAKRVQTLAQIVVDRYGGD
MUL_1002|M.ulcerans_Agy99           GLDAGDIADYDPDKFAALCSEKPAIHRFPGSMAKRVQTLAQIVVDRYGGD
Mflv_2147|M.gilvum_PYR-GCK          SFDAETIADHDPEAFTALCAQSPAVHRFPGSMSKRVQALAQVIVDEYGGD
Mvan_4556|M.vanbaalenii_PYR-1       SFDAHVIADHDPEAFAALCAQTPAVHRFPGSMAKRVQALAQVIVDEYGGD
TH_0478|M.thermoresistible__bu      TLDPAVIADYDPEQFAEVCAERPAVHRFPGSMAKRIQDLAQMVVDRYGGD
MSMEG_5156|M.smegmatis_MC2_155      KVDAVHIAEYNPDKFAEKFSETPAVHRFPGSMAKRVQALAQAVVDDYDGD
MAB_1302|M.abscessus_ATCC_1997      GIDAHQIAEYDPDKFVALCSERPAIHRFPGSMAKRVQVLAQEIVDEYDGR
                                     .*.  **:::*: *.   :: **:*******:**:* *** :** *.* 

Mb1187|M.bovis_AF2122/97            AAALWTAGEPDGNELLRRLKGLPGFGEQKARIFLALLGKQYGVTPKGWQV
Rv1156|M.tuberculosis_H37Rv         AAALWTAGEPDGNELLRRLKGLPGFGEQKARIFLALLGKQYGVTPKGWQV
MAV_1294|M.avium_104                AAALWTAGEPDGKELLRRLKGLPGFGEQKARIFLALLGKQYGVTPPGWRE
MMAR_4296|M.marinum_M               AAAIWTAGEPDGKELLGRLKGLPGFGEQKARIFLALLGKQYGVTPEGWQA
MUL_1002|M.ulcerans_Agy99           AAAIWTAGEPDGKELLGRLKGLPGFGEQKARIFLALLGKQYGVRPEGWQA
Mflv_2147|M.gilvum_PYR-GCK          ASALWSDG-ADGKEVLRRLKALPGFGEQKAKIFLALLGKQYGVDAKGWRA
Mvan_4556|M.vanbaalenii_PYR-1       ATALWSDG-ADGAEVLRRLKALPGFGEQKAKIFLALLGKQYGVTPKGWRA
TH_0478|M.thermoresistible__bu      AAAIWTSGDPDGPEVLRRLKELPGFGEQKAKIFLALLGKQYGVTPKGWRE
MSMEG_5156|M.smegmatis_MC2_155      VTAIWTGGDPDGPEVLRRLKRLPGFGDQKARIFLALLGKQYGVTPEGWRE
MAB_1302|M.abscessus_ATCC_1997      AENIWKAGDPDGPELLKRLKALPGFGEQKAKIFLALLGKQYGVQPKDWRK
                                    .  :*. * .** *:* *** *****:***:************ . .*: 

Mb1187|M.bovis_AF2122/97            AAGEFGQPGTYLSVADIVDAGSLGQVRSHKRQRKAAAKAEGKAPT-
Rv1156|M.tuberculosis_H37Rv         AAGEFGQPGTYLSVADIVDAGSLGQVRSHKRQRKAAAKAEGKAPT-
MAV_1294|M.avium_104                AAGEFGKAGTYLSVADIVDARSLGQVRSYKKQMKAAAKAAK-----
MMAR_4296|M.marinum_M               AAGDYGQPGTHMSVADVVDARSLGQVRSHKKQMKAAAKAAKQ----
MUL_1002|M.ulcerans_Agy99           AAGDYGQPGTHMSVADVVDARSLGQVRSHKKQMKAAAKAAKQ----
Mflv_2147|M.gilvum_PYR-GCK          AAGDYGKAGSHMSVADVKDPGSLQKVRAYKKEAKAAAKA-AKAAKV
Mvan_4556|M.vanbaalenii_PYR-1       AAGDYGKAGSHMSVADVTDPGSLQKVRTYKKEAKARNKE-AKAAKA
TH_0478|M.thermoresistible__bu      AAGDYGQPG-HRSIADVTDPASLEKVRSYKKQMKAGQKAGEKKVKS
MSMEG_5156|M.smegmatis_MC2_155      AAGDYGKAGTYMSVADVVDAGSLQKVRAYKKDMKAAAKAAKNK---
MAB_1302|M.abscessus_ATCC_1997      AAGNYGEKGTHLSVADVVDAESLGLVRAHKKEMKAAAKAKAAKA--
                                    ***::*: * : *:**: *. **  **::*:: **  *

species	id	gene	e-value	identity (len)	annotation
M. avium 104	MAV_1294	-	-	100% (191)	base excision DNA repair protein, HhH-GPD family protein