For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. avium 104 MAV_1144 (-)

VRAIATRATVKNAAAGLLCAAGLDALARRRHRDALAILMFHGVEDRPPSPPCWHVSGAALFRRQLRYVRA
HFNVLALEDALDRLAGGTLPPRALAITFDDGTRNLATHAMPVLRELELPAAVFLATGPIGTDRTLWPDRL
WLAIARSPAREIDLTPWGLGTRPLKSNIERGAAYAVVVEKLKNLPDPQRIAALDEILCALGHHDDSDGGP
FRMLSWEQARQLAAEPLVTLYPHTVTHPILARCDDAKLHREITESCAVIERETGSPPTVFAYPNGRLQDF
DERAKDVLRARGVRWALSTAPGFADRSCDPLALPRLAVGGDASLNYFKLLVSGGLPRR

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. avium 104	MAV_1144	-	-	100% (338)	polysaccharide deacetylase domain-containing protein

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	-	-	-	-	-
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	-	-	-	-	-
M. abscessus ATCC 19977	-	-	-	-	-
M. marinum M	-	-	-	-	-
M. smegmatis MC2 155	MSMEG_0478	-	1e-07	38.89% (72)	secreted protein, putative
M. thermoresistible (build 8)	-	-	-	-	-
M. ulcerans Agy99	-	-	-	-	-
M. vanbaalenii PYR-1	-	-	-	-	-

CLUSTAL 2.0.9 multiple sequence alignment


MAV_1144|M.avium_104                -MRAIATRATVKNAAAGLLCAAGLDALARRRHRDALAILMFHGVEDR---
MSMEG_0478|M.smegmatis_MC2_155      MALTAVSASLVAAYLAAPSYWQWHRAEERQQRLEIVQVDTPSGAVDRRLV
                                       : .: : *    *.        *  *::: : : :    *. **   

MAV_1144|M.avium_104                ------------PPSPPCWHVSG---------AALFRRQLRYVR-AHFNV
MSMEG_0478|M.smegmatis_MC2_155      RELRDATVSSQSAPIIITYHDIGYNESPYTVSPERFATQMQLIHDAGWTT
                                                .*    :*  *         .  *  *:: :: * :..

MAV_1144|M.avium_104                LALEDALDRLAGGTLPPRALAITFDDGTRNLATHAMPVLRELELPAAVFL
MSMEG_0478|M.smegmatis_MC2_155      LTIDQLDGWLDGDPLPPHSVLVTFDDGAKGVWRYADPVLERLGMHAAVFL
                                    *::::  . * *..***::: :*****::.:  :* ***..* : *****

MAV_1144|M.avium_104                ATGPIGTDR----------TLWPDRLWLAIARSPAREIDLTPWGLGTRP-
MSMEG_0478|M.smegmatis_MC2_155      ITGFVGTHQPYYMTWDEIGRLHSSGRWDVQAHTHLGHVEVPVDAAGNQAP
                                     ** :**.:           * ..  * . *::   .:::.  . *.:. 

MAV_1144|M.avium_104                -------LKSNIERGAAYAVVVEKLKNLPDPQR------IAALDEILCAL
MSMEG_0478|M.smegmatis_MC2_155      FLTSLQWLADQSRKETQQEYQRRVLQDLSECKRQFRAHGLPEPSYFAYPF
                                           * .: .: :      . *::*.: :*      :.  . :  .:

MAV_1144|M.avium_104                GHHDDSDG----------GPFRMLSWEQARQLAAEPLVTLYPHTVTHPIL
MSMEG_0478|M.smegmatis_MC2_155      SAHEGESEETEPLQEIVTSLYRMALLDDALEIRTSSSSDVQAGMIQRMDI
                                    . *:...           . :**   ::* :: :..   : .  : :  :

MAV_1144|M.avium_104                ARCDDAKLHREITESCAVIERETGSP-------------PTVFAYPNGRL
MSMEG_0478|M.smegmatis_MC2_155      VAATSTDLLVDKLEQASPIDPKASRPFADPTGWVDGTNNPAPVDLDADTL
                                    . . .:.*  :  *..: *: ::. *             *: .    . *

MAV_1144|M.avium_104                QDFDERAKDVLRARG-----------VRWALS--TAPGFADRSCDPLALP
MSMEG_0478|M.smegmatis_MC2_155      QINPDPGEEVIRTYAPIRSTMWTDYTIEFDVSGFAPEDWTTAGVTVLKPS
                                    *   : .::*:*: .           :.: :*  :. .::  .   *  .

MAV_1144|M.avium_104                RLAVGG---------------------------------------DASLN
MSMEG_0478|M.smegmatis_MC2_155      RAPFDGNVSQQVDVRIRGNAFGIGRSSKEFADHPLQQENSHHVVIDVTPQ
                                    * ...*                                       *.: :

MAV_1144|M.avium_104                YFKLLVSGGLPRR-------------------------------------
MSMEG_0478|M.smegmatis_MC2_155      QVTVGVDGDTPQVIHLEGNRSRGVGGGVSFWAYRQSEASPPIVFSNLTIR
                                     ..: *.*. *: