For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GLALATAALTLTPTAHADMQVGNYRVDTARDPGHSWIWAIRPCSYDRGPECLTVEAIPQPNGQAAWWKSD AHLSNGRYTMAVDVPDGVRCVVQFFPSHDVYSWDPATMSGQVDSTFDTGCGGGPGGSNSWPFSLVRW*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_0939 | - | - | 100% (138) | hypothetical protein MAV_0939 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_4542 | - | 9e-29 | 41.89% (148) | hypothetical protein Mflv_4542 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_2851 | - | 1e-24 | 43.93% (107) | hypothetical protein MSMEG_2851 |
| M. thermoresistible (build 8) | TH_0518 | - | 2e-24 | 39.86% (143) | conserved hypothetical protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2847 | - | 3e-28 | 42.86% (140) | hypothetical protein Mvan_2847 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4542|M.gilvum_PYR-GCK --MKLR-TAAAVLVSAGTVMSAPPAHAEPFFANYSLNIQGRYDFHTWTWA
Mvan_2847|M.vanbaalenii_PYR-1 --MRIRGVAGAVVLVAATIASAAPVGAAPFFANYSLNVQGRYDFHTWTWA
MSMEG_2851|M.smegmatis_MC2_155 MLMSGLMTAGAMVTGVTVAAVLSAAPARAFYANYQLIIPDRYDFHTWTWA
TH_0518|M.thermoresistible__bu VEEHVKSVVLCAALMVAALIAPPPASAAMPFGNYLLHMPDRRDFHTYIWV
MAV_0939|M.avium_104 ---------MGLALATAALTLTPTAHADMQVGNYRVDT-ARDPGHSWIWA
. . ... * .** : * *:: *.
Mflv_4542|M.gilvum_PYR-GCK VTY-CTP----AATDCARIKAIPMPTAKAFEYSGDARLADGRYTLAVDVP
Mvan_2847|M.vanbaalenii_PYR-1 VTY-CIP----DAPDCAHIKAIPMPIAKAFEYSGDAHLADGRYTLTVDVP
MSMEG_2851|M.smegmatis_MC2_155 VSY-CVP----EAADCVQITAIPMPVAKAFEYRANAYLTDGRYTLTVDVP
TH_0518|M.thermoresistible__bu LNAPCRNPDNSKRTDCVEVWTEPQPIAKAIYGHTQAWLADGRYTMVLDDP
MAV_0939|M.avium_104 IRP-CSYD---RGPECLTVEAIPQPNGQAAWWKSDAHLSNGRYTMAVDVP
: * .:* : : * * .:* :* *::****:.:* *
Mflv_4542|M.gilvum_PYR-GCK DGLRCGNVYYGPVIPTHDVYEWDAATLQGTMTSSFAHGCDGAPGGAFTYP
Mvan_2847|M.vanbaalenii_PYR-1 DGLRCGNVYYGPIIPTLDVYSWDAATLQGTLTSSFATGCDGAPGGAFTYP
MSMEG_2851|M.smegmatis_MC2_155 DGLRCGNVYYGPVIATRDVYSWDAETLQGTLESSFAAGCDGAPGGTFTYP
TH_0518|M.thermoresistible__bu FGLRCGDIYYGPTIPTHDVYTWDAETLAGELVSSFEVGCDGAPGGQHVYP
MAV_0939|M.avium_104 DGVRCVVQFF----PSHDVYSWDPATMSGQVDSTFDTGCGGGPGGSNSWP
*:** :: .: *** **. *: * : *:* **.*.*** :*
Mflv_4542|M.gilvum_PYR-GCK FTLVRL
Mvan_2847|M.vanbaalenii_PYR-1 FSLVRL
MSMEG_2851|M.smegmatis_MC2_155 FSLVRL
TH_0518|M.thermoresistible__bu FFLTRM
MAV_0939|M.avium_104 FSLVRW
* *.*