For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAKSNKRRPAPEKPVKARKCVFCAKKDQAIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIAIAVKN AREVALLPFTSSAR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_0076 | rpsR | - | 100% (84) | 30S ribosomal protein S18 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0056 | rpsR | 2e-42 | 95.24% (84) | 30S ribosomal protein S18 |
| M. gilvum PYR-GCK | Mflv_0876 | rpsR | 5e-37 | 86.36% (88) | 30S ribosomal protein S18 |
| M. tuberculosis H37Rv | Rv0055 | rpsR | 2e-42 | 95.24% (84) | 30S ribosomal protein S18 |
| M. leprae Br4923 | MLBr_02683 | rpsR | 1e-41 | 94.05% (84) | 30S ribosomal protein S18 |
| M. abscessus ATCC 19977 | MAB_4897c | rpsR | 3e-37 | 85.71% (84) | 30S ribosomal protein S18 |
| M. marinum M | MMAR_0074 | rpsR | 3e-43 | 97.62% (84) | 30S ribosomal protein S18-1 RpsR1 |
| M. smegmatis MC2 155 | MSMEG_6895 | rpsR | 2e-40 | 91.67% (84) | 30S ribosomal protein S18 |
| M. thermoresistible (build 8) | TH_2094 | rpsR | 4e-40 | 91.67% (84) | PROBABLE 30S RIBOSOMAL PROTEIN S18-1 RPSR1 |
| M. ulcerans Agy99 | MUL_0073 | rpsR | 2e-43 | 97.62% (84) | 30S ribosomal protein S18 |
| M. vanbaalenii PYR-1 | Mvan_6032 | rpsR | 7e-37 | 87.36% (87) | 30S ribosomal protein S18 |
CLUSTAL 2.0.9 multiple sequence alignment
MAV_0076|M.avium_104 MAKSN--KRRPAPEKPVKARKCVFCAKKDQA--IDYKDTALLRTYISERG
MLBr_02683|M.leprae_Br4923 MAKST--KRRPAPEKPAKARKCVFCAKKNQQ--IDYKDTTLLRTYISERG
MMAR_0074|M.marinum_M MAKSN--KRRPAPEKPVKTRKCVFCAKKDQA--IDYKDTALLRTYISERG
MUL_0073|M.ulcerans_Agy99 MAKSN--KRRPAPEKPVKTRKCVFCAKKDQA--IDYKDTALLRTYISERG
Mb0056|M.bovis_AF2122/97 MAKSS--KRRPAPEKPVKTRKCVFCAKKDQA--IDYKDTALLRTYISERG
Rv0055|M.tuberculosis_H37Rv MAKSS--KRRPAPEKPVKTRKCVFCAKKDQA--IDYKDTALLRTYISERG
TH_2094|M.thermoresistible__bu MAKSN--KRRPAPEKPVKTRKCVFCSKKGQV--IDYKDTALLRTYISERG
MSMEG_6895|M.smegmatis_MC2_155 MAKSN--KRRPAPEKPVKTRKCVFCSKKGQT--IDYKDTALLRTYISERG
Mflv_0876|M.gilvum_PYR-GCK MAKSSSTKRRPAPEKPVKTRKCVFCSKKGKNQVIDYKDTQLLRTYISERG
Mvan_6032|M.vanbaalenii_PYR-1 MAKSS-TKRRPAPEKPVKTRKCVFCSKKGKNQDIDYKDTQLLRTYISERG
MAB_4897c|M.abscessus_ATCC_199 MAKTT--KRRPAPEKPVKTRKCAFCTKKALN--IDYKDTNLLRTYISERG
***:. *********.*:***.**:** ****** **********
MAV_0076|M.avium_104 KIRARRVTGNCVQHQRDIAIAVKNAREVALLPFTSSAR
MLBr_02683|M.leprae_Br4923 KIRARRVTGNCVQHQRDIAIAVKNAREVALLPFTSSAR
MMAR_0074|M.marinum_M KIRARRVTGNCVQHQRDIALAVKNAREVALLPFTSSAR
MUL_0073|M.ulcerans_Agy99 KIRARRVTGNCVQHQRDIALAVKNAREVALLPFTSSAR
Mb0056|M.bovis_AF2122/97 KIRARRVTGNCVQHQRDIALAVKNAREVALLPFTSSVR
Rv0055|M.tuberculosis_H37Rv KIRARRVTGNCVQHQRDIALAVKNAREVALLPFTSSVR
TH_2094|M.thermoresistible__bu KIRARRVTGNCVQHQSDIANAVKNAREMALLPFTSSAR
MSMEG_6895|M.smegmatis_MC2_155 KIRARRVTGNCVQHQRDIAVAVKNAREVALLPFGSSTR
Mflv_0876|M.gilvum_PYR-GCK KIRARRVTGNCVQHQRDIAIAVKNAREVALLPFSSSTR
Mvan_6032|M.vanbaalenii_PYR-1 KIRARRVTGNCVQHQRDIAIAVKNAREVALLPFSSSTR
MAB_4897c|M.abscessus_ATCC_199 KIRARRVTGNCVQHQRDIAIAVKNAREVALLPFSSATR
*************** *** *******:***** *:.*