For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSSPNEPGAPKKGETPNGDGSAERAGVRRATPPAPGGRAPEAGDGPPWQRGSTRPQQPPPRQNEPPTEKR PGGGAEARLNRFISGTAAPGTASHAKEPERGEGPPAEAYASELPDLSGPVPRGPHRKPAAERGAETTGGQ GGGRPVSGESREGRDNRDRVQVSRRTRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMIAVAFLYLVL GGMGVWSKLNSNVGDLLNNTSGSSGELVSSGTIFGGAVLIGLVNIVLLTAMATIAAFIYNLATDLIGGIE VTLADRD
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_0007 | - | - | 100% (287) | hypothetical protein MAV_0007 |
| M. avium 104 | MAV_3468 | secD | 9e-06 | 32.09% (134) | preprotein translocase subunit SecD |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0007 | - | 1e-101 | 64.42% (312) | hypothetical protein Mb0007 |
| M. gilvum PYR-GCK | Mflv_0820 | - | 5e-79 | 56.27% (327) | hypothetical protein Mflv_0820 |
| M. tuberculosis H37Rv | Rv0007 | - | 1e-101 | 64.74% (312) | hypothetical protein Rv0007 |
| M. leprae Br4923 | MLBr_00007 | - | 5e-86 | 58.58% (309) | hypothetical protein MLBr_00007 |
| M. abscessus ATCC 19977 | MAB_0020 | - | 3e-65 | 48.09% (341) | hypothetical protein MAB_0020 |
| M. marinum M | MMAR_0007 | - | 1e-106 | 68.32% (303) | hypothetical protein MMAR_0007 |
| M. smegmatis MC2 155 | MSMEG_0007 | - | 3e-76 | 56.23% (297) | hypothetical protein MSMEG_0007 |
| M. thermoresistible (build 8) | TH_0296 | - | 2e-59 | 70.41% (169) | POSSIBLE CONSERVED MEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_0007 | - | 1e-105 | 67.22% (302) | hypothetical protein MUL_0007 |
| M. vanbaalenii PYR-1 | Mvan_0008 | - | 1e-77 | 56.37% (314) | hypothetical protein Mvan_0008 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0820|M.gilvum_PYR-GCK MSSPKEPGPAHAGD--GAAPAE---GPGNGSAAPGHDAGARP-----AHV
Mvan_0008|M.vanbaalenii_PYR-1 MSSPQEPGYPRAGD--AAN------GPAAGPAGSGHDGGPRP-----AHT
MSMEG_0007|M.smegmatis_MC2_155 MSSPNEPGYPRAGDRPGATNGT---GPGGDSGALSSNSTRAT-----GHI
TH_0296|M.thermoresistible__bu --------------------------------------------------
Mb0007|M.bovis_AF2122/97 MTAPNEPGALSKGDGPNADGLV---DRGGAHRAAT-GPG---------RI
Rv0007|M.tuberculosis_H37Rv MTAPNEPGALSKGDGPNADGLV---DRGGAHRAAT-GPG---------RI
MMAR_0007|M.marinum_M MTSPNDPGAPNMGDNFNGDAAV---DRSGVHRAGT-GPG---------RL
MUL_0007|M.ulcerans_Agy99 MTSPNDPGAPNMGDNFNGDAAV---DRSGVHRAGP-GPG---------RL
MAV_0007|M.avium_104 MSSPNEPGAPKKGETPNGDGSA---ERAGVRRATPPAPGG--------RA
MLBr_00007|M.leprae_Br4923 MTSPNESRAFNAADDLIGDGSV---ERAGLHRATS-VPGESSEGLQRGHS
MAB_0020|M.abscessus_ATCC_1997 MSSPNDPGESGANERPVDQADLPPWQRAERRRGSHAAATGPQ------RI
Mflv_0820|M.gilvum_PYR-GCK ADTTELPPWQRGPATRARQQPQA--PESPRPDGPRGGGQAGLDARLNRFM
Mvan_0008|M.vanbaalenii_PYR-1 AEGADVPPWQRGPAGRARQH-QA--PEGAQGEGPRPNAPGGLDARLNRFM
MSMEG_0007|M.smegmatis_MC2_155 TDSGDVPPWQRG-VSRTAQQPGQ--PLGDTEQQPRP--------------
TH_0296|M.thermoresistible__bu --------------------------------------------------
Mb0007|M.bovis_AF2122/97 PDAGDPPPWQRA-ATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFI
Rv0007|M.tuberculosis_H37Rv PDAGDPPPWQRA-ATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFI
MMAR_0007|M.marinum_M PDPADSPPWQRG-AARPGNPGPR--PPEQSGEGRVPGPTSAADARLSRFI
MUL_0007|M.ulcerans_Agy99 PDPADSPPWQRG-AARPGNPGPR--PPEQSGEGRVPGPTSAADARLSRFI
MAV_0007|M.avium_104 PEAGDGPPWQRG-STRPQQPPPR--QNEPPTEKR---PGGGAEARLNRFI
MLBr_00007|M.leprae_Br4923 PEPNDSPPWQRG-SARASQSGYR--PSDPLTTTRQSNPAPGANVRSNRFI
MAB_0020|M.abscessus_ATCC_1997 PDREPRPGGAPTEIIPIVDDASAPPTAPTSAPRPSGRPSAGLDARLSRFI
Mflv_0820|M.gilvum_PYR-GCK AGGSAPSGAPDAPPRNEPPRNDPPRNEPAPRNDRTDVVRPEPKPRPEGG-
Mvan_0008|M.vanbaalenii_PYR-1 AGGSAPAGSQETEP------------APAPRNARTEVVRTEGN-RPEPGP
MSMEG_0007|M.smegmatis_MC2_155 ----APR--------------------PEPRETRQEP-------RPEHR-
TH_0296|M.thermoresistible__bu -----------------------------------VP-------RPPHR-
Mb0007|M.bovis_AF2122/97 SGASAPVTGPA----------------AAVRTPQPDPDASLGCGDGSP--
Rv0007|M.tuberculosis_H37Rv SGASAPVTGPA----------------AAVRTPQPDPDASLGCGDGSP--
MMAR_0007|M.marinum_M SGTSAPAGAP-----------------APVKAPPPEAEAPPVRGENLP--
MUL_0007|M.ulcerans_Agy99 SGTSAPAGGP-----------------APVKAPPPEAEAPPVRGENLP--
MAV_0007|M.avium_104 SGTAAPGTAS--------------------HAKEPE------RGEGPP--
MLBr_00007|M.leprae_Br4923 SGMTAPALSGQ----------------LPKKNNSTQALEPVLMSNEVPF-
MAB_0020|M.abscessus_ATCC_1997 SGTAAPAGFTTP---------------PARAEADPEPEPYDEVPERPER-
Mflv_0820|M.gilvum_PYR-GCK RPE-GAAYASELPDLSGPRPPQPPRKPVERPSTESKP-PAKGSPSP----
Mvan_0008|M.vanbaalenii_PYR-1 RPDQGAAYASEIPDLSGPRPPQQ-RKPVDRPVPEQQPKPTPKPAPP----
MSMEG_0007|M.smegmatis_MC2_155 ----TEAYASELPDLSGPVPRSPQRKTG-----------ADAPRAS----
TH_0296|M.thermoresistible__bu ----KTG---------------PDRPAG-----------DPSLRN-----
Mb0007|M.bovis_AF2122/97 ----AEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGG
Rv0007|M.tuberculosis_H37Rv ----AEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGG
MMAR_0007|M.marinum_M ----AEAYASELPDLSGPAPRPVQRKPAPDRGADNSGAHPVAGAARS--A
MUL_0007|M.ulcerans_Agy99 ----AEVYASELPDLSGPAPRPVQRKPAPDRGADNSGADPMAGAARS--G
MAV_0007|M.avium_104 ----AEAYASELPDLSGPVPRGPHRKPAAERGAETTGGQGGGRPVSG---
MLBr_00007|M.leprae_Br4923 ----TESYASELPDLSGPVQRTVPCKPSPDRGSSTP---RMGRLEIT---
MAB_0020|M.abscessus_ATCC_1997 ---SERADRPEPPRAGTPWGESGAQEPVRASKSALKNEDLPDLSGPVP-R
.
Mflv_0820|M.gilvum_PYR-GCK ------AG--RVQVASRQHR-GPVRASMQIRRVDPWSTLKVSLLLSVVLF
Mvan_0008|M.vanbaalenii_PYR-1 ------AGNRAVQVATRAHT-GPVRASMQIRRVDPWSTLKVSLLLSVVLF
MSMEG_0007|M.smegmatis_MC2_155 ------APTTRIQVANRPQPSGPVRASMQIRRVDPWTVLKVSLVLSVVLF
TH_0296|M.thermoresistible__bu ------APTTRLQVGHRPR--GPVRASMQIRRVDPWSVLKVSLVLSVVLF
Mb0007|M.bovis_AF2122/97 RSITAESRDARVQLSARRS-RGPVRASMQIRRIDPWSTLKVSLLLSVALF
Rv0007|M.tuberculosis_H37Rv RSITAESRDARVQLSARRS-RGPVRASMQIRRIDPWSTLKVSLLLSVALF
MMAR_0007|M.marinum_M AAEARESRESRFQVSSRRAARGPVRASMQIRRIDPWSTLKVSALLSVALF
MUL_0007|M.ulcerans_Agy99 AAEARESRESRFQVSSRRAARGPVRASMQIRRIDPWSTLKVSALLSVALF
MAV_0007|M.avium_104 --ESREGRDNRDRVQVSRRTRGPVRASMQIRRIDPWSTLKVSLLLSVALF
MLBr_00007|M.leprae_Br4923 --KVRGTGEIRSQIS--RRSHGPVRASMQIRRIDPWSMLKVSLLLSVALF
MAB_0020|M.abscessus_ATCC_1997 PPRRSDAAQGGSAVTVGPSRRGPLRAAMQIRRIDPWATLKVSLVLSVVFF
: **:**:*****:***: **** :***.:*
Mflv_0820|M.gilvum_PYR-GCK FVWMIAVAFLYLVLGGMGVWSKLNSNVGDLLTSASGSSGGELVSSGTIFG
Mvan_0008|M.vanbaalenii_PYR-1 FVWMIAVAFLYLVLGGMGVWSKLNSNVGDLLTSASGSSGGELVSSGTIFG
MSMEG_0007|M.smegmatis_MC2_155 FVWMIAVAFLYLVLGGMGVWSKLNSNVGDLLTSASGSSGGELVSSGTIFG
TH_0296|M.thermoresistible__bu FVWMIAVAFLYLVLGGMGVWSKLNSNVGDLLTSASGTTGGELVSSGTIFG
Mb0007|M.bovis_AF2122/97 FVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSA-ELVSSGTIFG
Rv0007|M.tuberculosis_H37Rv FVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSA-ELVSSGTIFG
MMAR_0007|M.marinum_M FIWMIAVAFLYLVLGGMGVWAKLNSNVGDLLNNTSGSSA-ELVSSGTIFG
MUL_0007|M.ulcerans_Agy99 FIWMIAVAFLYLVLGGMGVWAKLNSNVGDLLNNTSGSSA-ELVSSGTIFG
MAV_0007|M.avium_104 FVWMIAVAFLYLVLGGMGVWSKLNSNVGDLLNNTSGSSG-ELVSSGTIFG
MLBr_00007|M.leprae_Br4923 FVWMIAVAFLYLLLGGMGVWAKLNSNVGDLLNNTGGNSG-ELVSNSTIFG
MAB_0020|M.abscessus_ATCC_1997 FVWMIAVAMLYLVLGAMGVWSKLNENVGELITNSG---GGELVSSGTIFG
*:***:**:***:**.****:***.***:*:..:. . ****..****
Mflv_0820|M.gilvum_PYR-GCK GAALIGLVNIVLLTAGATIGAFIYNLTTDLVGGVEVTLADRD--------
Mvan_0008|M.vanbaalenii_PYR-1 GAALIGLVNIVLLTAAATIGAFIYNLTTDLVGGVEVTLADRD--------
MSMEG_0007|M.smegmatis_MC2_155 GAALIGLVNIVVLSAMATVGAFIYNLTTDLVGGIEVTLADRD--------
TH_0296|M.thermoresistible__bu GAALIGLVNIVLLSAMATIGAFVYNLTTDLVGGVEVTLADRD--------
Mb0007|M.bovis_AF2122/97 GAFLIGLVNVVLMTALATIGAFVYNLITDLIGGIEVTLADRD--------
Rv0007|M.tuberculosis_H37Rv GAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD--------
MMAR_0007|M.marinum_M GAVLIGLVNIVLMTAMATIAAFIYNLATDLIGGIEVTLADRD--------
MUL_0007|M.ulcerans_Agy99 GAVLIGLVNIVLMTAMATIAAFTYNLATDLIGGIEVTLADRDLRFWESGT
MAV_0007|M.avium_104 GAVLIGLVNIVLLTAMATIAAFIYNLATDLIGGIEVTLADRD--------
MLBr_00007|M.leprae_Br4923 CAVLVGLVNIVLMTTMAAIAAFVYNLSSDLVGGVEVTLADLD--------
MAB_0020|M.abscessus_ATCC_1997 TALLIGLVNIVLMTAAATIGAFIYNLTTDLVGGIEITLADRD--------
* *:****:*:::: *::.** *** :**:**:*:**** *
Mflv_0820|M.gilvum_PYR-GCK ------------------------
Mvan_0008|M.vanbaalenii_PYR-1 ------------------------
MSMEG_0007|M.smegmatis_MC2_155 ------------------------
TH_0296|M.thermoresistible__bu ------------------------
Mb0007|M.bovis_AF2122/97 ------------------------
Rv0007|M.tuberculosis_H37Rv ------------------------
MMAR_0007|M.marinum_M ------------------------
MUL_0007|M.ulcerans_Agy99 HCGNLVARPYAQYGPIAQAVRALR
MAV_0007|M.avium_104 ------------------------
MLBr_00007|M.leprae_Br4923 ------------------------
MAB_0020|M.abscessus_ATCC_1997 ------------------------