For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TLGDTQKQLEQVIADLRQVGEITVSTVWPIAKKVVGAVRKVISIATEPPPPEPDTVRDVAARWREMAPAM GEWHANDVQQAQNTIPDTVWGRTPGDPYGETTGDKARTSIANFKTRSTTIGPAATGVASSLDTFAGSMEK ARARWHNAFASLKDDVDWNNIPKNPFDAIPYVRKLVGDVLHGVEELAGAYGDADKAVNNAKGELGKAMEG ITLPDHTSVAAGAIGSVNNWSDVKNDPDGHKDGTGLRPGVQERADANLAAMSPEDRAKAQAMLDNAKDEA RRNWIISALARGGDIGSLQRFSEKLAQMDDQQVRELDPVEYAKNHPGVLVQPDGTTCGSSSLVVAKMIND PMYAMKMLTGYDANGSAAPQPGQSLTTAEVTSRFADEAKKMHDSTNNAIVPGWGTTWPESLGTPPGGAAD EMGKPGGPGVPGSAYQFEVANPLGPSGDYQAISAAVQSGQSVPLFVGSGANGHIVLVTGIQGDSLEIYEP SSGQKMTIPRDDFVNNRISFGGETRYRPWGEVIPK*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_4582c | - | - | 100% (526) | hypothetical protein MAB_4582c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_6497 | - | 1e-12 | 27.92% (197) | hypothetical protein MSMEG_6497 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_5721 | - | 5e-11 | 30.46% (197) | hypothetical protein Mvan_5721 |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_6497|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_5721|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4582c|M.abscessus_ATCC_199 MTLGDTQKQLEQVIADLRQVGEITVSTVWPIAKKVVGAVRKVISIATEPP
MSMEG_6497|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_5721|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4582c|M.abscessus_ATCC_199 PPEPDTVRDVAARWREMAPAMGEWHANDVQQAQNTIPDTVWGRTPGDPYG
MSMEG_6497|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_5721|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4582c|M.abscessus_ATCC_199 ETTGDKARTSIANFKTRSTTIGPAATGVASSLDTFAGSMEKARARWHNAF
MSMEG_6497|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_5721|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4582c|M.abscessus_ATCC_199 ASLKDDVDWNNIPKNPFDAIPYVRKLVGDVLHGVEELAGAYGDADKAVNN
MSMEG_6497|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_5721|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4582c|M.abscessus_ATCC_199 AKGELGKAMEGITLPDHTSVAAGAIGSVNNWSDVKNDPDGHKDGTGLRPG
MSMEG_6497|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_5721|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4582c|M.abscessus_ATCC_199 VQERADANLAAMSPEDRAKAQAMLDNAKDEARRNWIISALARGGDIGSLQ
MSMEG_6497|M.smegmatis_MC2_155 -------------------MEPERIAALRLRQRDGITCGPTVAVVAGVML
Mvan_5721|M.vanbaalenii_PYR-1 ----------------------MKIAPLHLRQRDTTTCGPTVAVVAGAIV
MAB_4582c|M.abscessus_ATCC_199 RFSEKLAQMDDQQVRELDPVEYAKNHPGVLVQPDGTTCGSSSLVVAKMIN
: . * * * ***.: *** :
MSMEG_6497|M.smegmatis_MC2_155 DPAKRDKLLG------------------SHGGQWFAAEQGRIHSDIN---
Mvan_5721|M.vanbaalenii_PYR-1 DPAYRLSLTA------------------PDADVWFEAEQGRVHLSVN---
MAB_4582c|M.abscessus_ATCC_199 DPMYAMKMLTGYDANGSAAPQPGQSLTTAEVTSRFADEAKKMHDSTNNAI
** .: .. * * ::* . *
MSMEG_6497|M.smegmatis_MC2_155 -----AIWPRRLGTTPAGMARALSEHSA----SAGFRYRWRRFRGASDPL
Mvan_5721|M.vanbaalenii_PYR-1 -----RVWPRALGTTPVGMARAVTACSR----GRGVSYRWRLWRGRRDGL
MAB_4582c|M.abscessus_ATCC_199 VPGWGTTWPESLGTPPGGAADEMGKPGGPGVPGSAYQFEVANPLGPSGDY
**. ***.* * * : . . . :. * .
MSMEG_6497|M.smegmatis_MC2_155 TDVLRAAAEGRPVAMLVGARGIPRHWVLIVGVSGGRLQCYEPSSGRVVGV
Mvan_5721|M.vanbaalenii_PYR-1 ADVLSAVRSGWPVAMLVG-RFLPRHWVLIVNASDDEMHCYEPSSGEVRAV
MAB_4582c|M.abscessus_ATCC_199 QAISAAVQSGQSVPLFVG-SGANGHIVLVTGIQGDSLEIYEPSSGQKMTI
: *. .* .*.::** * **:.. ... :. ******. :
MSMEG_6497|M.smegmatis_MC2_155 PVDNIRGARLTGVGFR--RPFAFVVPDR-
Mvan_5721|M.vanbaalenii_PYR-1 SIDMVRQARMTGLGYR--RPFGFVLPSSR
MAB_4582c|M.abscessus_ATCC_199 PRDDFVNNRISFGGETRYRPWGEVIPK--
. * . *:: * **:. *:*.