For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VGMSHFSRLRRTATGPRLITTALGLMLVAALPIPATHNTARAEAAHDAVLAAIANTKGTFLVYNFGGSNP APFRNAAGNEYTLDNGGHLMVIKSASSRLRANLLVDTHSGYQSRCERDPRARTSEGLWQASETYKPMAAW VAMGKPTFIINANFFDVRGQKGGTWKSTGCTSPLGAYVDTANGSANYNKQVTGTRVYAGKQALSGGDEVW TALATMVFSQGSAPEVIASAGPKDFGYATAPLEGLMDKGVQFVAVSGLKLLLPGFTEQLNDPGPAAARTA LGYKSATDELMVFQGGSYTPDNLQDLYRGLGVDKAIALDGGSSSAIVLRRDAGGMWAGYGSPKGNCDTTY TLCDAAGGVGRALPSWLGFS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4562 | - | - | 100% (370) | putative lipoprotein LprO |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0185c | lprO | 1e-120 | 57.73% (362) | putative lipoprotein LPRO |
M. gilvum PYR-GCK | Mflv_0698 | - | 1e-116 | 57.42% (357) | hypothetical protein Mflv_0698 |
M. tuberculosis H37Rv | Rv0179c | lprO | 1e-120 | 58.01% (362) | lipoprotein LprO |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_0422 | lprO | 1e-119 | 56.49% (370) | lipoprotein LprO |
M. avium 104 | MAV_5005 | - | 1e-116 | 56.35% (362) | LprO protein |
M. smegmatis MC2 155 | MSMEG_0210 | - | 1e-125 | 65.15% (330) | LprO protein |
M. thermoresistible (build 8) | TH_0607 | lprO | 1e-120 | 60.51% (352) | POSSIBLE LIPOPROTEIN LPRO |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0144 | - | 1e-122 | 58.86% (367) | hypothetical protein Mvan_0144 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_0210|M.smegmatis_MC2_155 ------------------MYFVPGLAKLFRRVTAGAATFALCAVLGTGGA TH_0607|M.thermoresistible__bu -------------------------MAVLRRAAAGLAASALAAVSATVGV Mb0185c|M.bovis_AF2122/97 ------------MWIRAERVAVLTPTASLRRLTACYAALAVCAALACTTG Rv0179c|M.tuberculosis_H37Rv ------------MWIRAERVAVLTPTASLRRLTACYAALAVCAALACTTG MMAR_0422|M.marinum_M MGRMCLMLGGLLLDLGRKGYLVLTAFASLRRLTACFAVLAVCATLATTTG MAV_5005|M.avium_104 ---------------------MLTRRASFRRLAACCTALSACLTLAVTSG Mflv_0698|M.gilvum_PYR-GCK ------------MTTPTANFRRLPMRTG-TALVAKLAVVTLCAMLAAVAV Mvan_0144|M.vanbaalenii_PYR-1 ------------MPTPRANIRRLLAGARIAALASKATAAAMCGVMAAAAG MAB_4562|M.abscessus_ATCC_1997 --------------MGMSHFSRLRRTATGPRLITTALGLMLVAALPIPAT : MSMEG_0210|M.smegmatis_MC2_155 PPTRAE-DPRTLLLGAIANTKGSYLVYNFGGQFAAPFLTADGRAYTLNNG TH_0607|M.thermoresistible__bu PTAGANPDARALLLGAIANTKGSYLVYNFGGKFAAPFRAADGREYTLNNG Mb0185c|M.bovis_AF2122/97 QPAARAADGREMLAQAIATTRGSYLVYNFGGGHPMPLLNAGGHWYEMNNG Rv0179c|M.tuberculosis_H37Rv QPAARAADGREMLAQAIATTRGSYLVYNFGGGHPMPLLNAGGHWYEMNNG MMAR_0422|M.marinum_M RPLARAADGREMLEHAIATTRGSYLVYNFGGGHPMPLLNGAGHWYEMNNG MAV_5005|M.avium_104 QPLARAADGRDLLANAISSTRGSYLVYNFGPGHPAPMLNAGGSWYEMNNG Mflv_0698|M.gilvum_PYR-GCK APPARAANARELLAGAIANTRGSYLVYNFGSGFAAPMLNAAGNWYEMNNG Mvan_0144|M.vanbaalenii_PYR-1 TPTAQAAGARELLAGAIANTRGSYLVYNFGSGFPAPMLNAAGNWYELSNG MAB_4562|M.abscessus_ATCC_1997 HNTARAEAAHDAVLAAIANTKGTFLVYNFGGSNPAPFRNAAGNEYTLDNG : : **:.*:*::****** . *: . * * :.** MSMEG_0210|M.smegmatis_MC2_155 GHLMTIKNASTRLNPRLLVDTHQGYQSRCERTPGARTSEGLWQASETYAP TH_0607|M.thermoresistible__bu GHFLTIKNASARLAPRLLVDTHRGYQARCERDPRARTSEGLFQAAETYPP Mb0185c|M.bovis_AF2122/97 GHLMIIKNASQRLSPHLLVDTHTGDQARCEHNPGAHTGEGLWQASEIYPP Rv0179c|M.tuberculosis_H37Rv GHLMIIKNASQRLSPHLLVDTHTGDQARCEHNPGARTGEGLWQASEIYPP MMAR_0422|M.marinum_M GHLMIVKNASQRLQPHLLVDTHTGDQARCERNPGARTSEGLWQASEIYPP MAV_5005|M.avium_104 GHLMIIKNAAGRLSPHLLVDTHQGDQARCENNPGARTAEGLWQASELYAP Mflv_0698|M.gilvum_PYR-GCK GRLMIIKNASQRLAPRLLADSHTGYQARCEQDPRARTGEGLWQSAEIYTP Mvan_0144|M.vanbaalenii_PYR-1 GRLMIIKGASQRLAPRLLADSHTGYQARCERDPRARTGEGLWQASEIYSP MAB_4562|M.abscessus_ATCC_1997 GHLMVIKSASSRLRANLLVDTHSGYQSRCERDPRARTSEGLWQASETYKP *::: :*.*: ** ..**.*:* * *:***. * *:*.***:*::* * * MSMEG_0210|M.smegmatis_MC2_155 LNAWHVLGQPTIAVNANFFDVRPQKGGSWRDTKCSSPLGAYVDNTRGQGR TH_0607|M.thermoresistible__bu LQAWQVLGQPVVAINANFFDVRPQKGGSWRDTNCSSPLGAYVDNTRGLGR Mb0185c|M.bovis_AF2122/97 LKAWQRMGRPTIAVNANFFDVRGQKGGSWRSTGCSSPLGAYVDNTRGQGR Rv0179c|M.tuberculosis_H37Rv LKAWQRMGRPTIAVNANFFDVRGQKGGSWRSTGCSSPLGAYVDNTRGQGR MMAR_0422|M.marinum_M LQAWQRMGQPTIAINANFFDVRGQKGGSWRTTGCSSPLGAFVDNTHGMGR MAV_5005|M.avium_104 LQAWQRMGQPTIAINANFFDVRPQKGGSWRQTGCSSPLGAFVDNTNGRGR Mflv_0698|M.gilvum_PYR-GCK IQAWQALGQPTIAINANFFDVRGQQGGSWKTIGCSSPLGAYVDNTRNLGR Mvan_0144|M.vanbaalenii_PYR-1 IEAWMALGQPTIAINANFFDVRGQQGGSWKSTGCSSPLGAYVDNTRGLGR MAB_4562|M.abscessus_ATCC_1997 MAAWVAMGKPTFIINANFFDVRGQKGGTWKSTGCTSPLGAYVDTANGSAN : ** :*:*.. :******** *:**:*: *:*****:**.:.. .. MSMEG_0210|M.smegmatis_MC2_155 TNKAVTGTLAYAGKQGLSGGNEHWSALATMILPVGGAPYVIMPKGPNDYD TH_0607|M.thermoresistible__bu ANAAVTGTPVYAGKQGLSGGNEHWSALATMILPVGGQPYVVMPKHPSDYD Mb0185c|M.bovis_AF2122/97 ANQAVTGTVAYAGKQGLSGGNELWSSLTTMILPVGGAPYVLRPKSRQDYD Rv0179c|M.tuberculosis_H37Rv ANQAVTGTVAYAGKQGLSGGNELWSSLTTMILPVGGAPYVLRPKSRQDYD MMAR_0422|M.marinum_M ANQAVTGTVAYAGKQGLSGGNEVWTSLTTMIIPVGGAPYVLRPKGRQDYD MAV_5005|M.avium_104 ANQAVTGTVAYPGKQGLSGGGESWSALTTMILPSGGAPYVVWPKTKSDYD Mflv_0698|M.gilvum_PYR-GCK TNAKVTGTLAYAGKQGLSGGNENWMALSTMVLPVQGTPFVVPPRSDDDYD Mvan_0144|M.vanbaalenii_PYR-1 TNAAVTGTLAYAGKQGLSGGNEHWMALSTMILPVKGAPFVVPPRGDDDFD MAB_4562|M.abscessus_ATCC_1997 YNKQVTGTRVYAGKQALSGGDEVWTALATMVFSQGSAPEVIASAGPKDFG * **** .*.***.****.* * :*:**::. . * *: . .*:. MSMEG_0210|M.smegmatis_MC2_155 AASPEIQRLVDSGTRFVAVAGIGLLAPGDTGQLNDGGPSAARTALGYNRA TH_0607|M.thermoresistible__bu AASPEILRLLESNTRFVAVAGIGLLGPGKTEQLNDGGPAAARTAIGYNRQ Mb0185c|M.bovis_AF2122/97 LATPVIEDLLNKNARFVAVAGIGLLSPGNTGQLHDGGPSAARTALAYAKQ Rv0179c|M.tuberculosis_H37Rv LATPVIEDLLNKNARFVAVAGIGLLSPGNTGQLHDGGPSAARTALAYAKQ MMAR_0422|M.marinum_M LATPVIQDLLNKNAKFVAVAGIGLLSPGDIGQLHDGGPSAARTALAYSKP MAV_5005|M.avium_104 AATPVVADLLNKNEKFVAVSGIGLLAPGNTGQLHDGGPSAARTAIGYARQ Mflv_0698|M.gilvum_PYR-GCK AATPVVTQLIDQGTRFVAVAGIGLLAPGDTGQLNDPGPSAARTALAYVKD Mvan_0144|M.vanbaalenii_PYR-1 AATPVVTSLIDKGTRFVAVAGIGLLAPGETGQLNDPGPSAARTAIAYVKE MAB_4562|M.abscessus_ATCC_1997 YATAPLEGLMDKGVQFVAVSGLKLLLPGFTEQLNDPGPAAARTALGYKSA *:. : *::.. :****:*: ** ** **:* **:*****:.* MSMEG_0210|M.smegmatis_MC2_155 ADQLYVFQGGSYTPDNMQDLFRGLGADNAVLLDGGGSSAIVLRRDTGGMW TH_0607|M.thermoresistible__bu LDQFYVFQGGSYTPDNIQDLFRGMGADSAILLDGGGSSAIVLRRDTGGMW Mb0185c|M.bovis_AF2122/97 KDEMYIFQGGNYTPDNIQDLFRGLGSDTAILLDGGGSSAIVLRRDTGGMW Rv0179c|M.tuberculosis_H37Rv KDEMYIFQGGNYTPDNIQDLFRGLGSDTAILLDGGGSSAIVLRRDTGGMW MMAR_0422|M.marinum_M KDEMYIFEGGSYTPDNIQDLFRGLGSDTAILLDGGGSSAIVLRRDTGGMW MAV_5005|M.avium_104 KDEMYIFEGGSYTPDNMQDLFRGLGSDNAVLLDGGGSSAIVLRRDTGGMW Mflv_0698|M.gilvum_PYR-GCK RDEMYVFQGGSYTPDQIQDLFRGLGSDTAVLLDGGGSSAIVLRRDTGGMW Mvan_0144|M.vanbaalenii_PYR-1 RDEMYVFQGGSYTPDQIQDLFRGLGSDTAVLLDGGGSSAIVLRRDTGGMW MAB_4562|M.abscessus_ATCC_1997 TDELMVFQGGSYTPDNLQDLYRGLGVDKAIALDGGSSSAIVLRRDAGGMW *:: :*:**.****::***:**:* *.*: ****.*********:**** MSMEG_0210|M.smegmatis_MC2_155 SGAGSPRGNCDTRQVLCDSRE---RALPSWLAFN TH_0607|M.thermoresistible__bu SGAGAPRGNCDTRQVLCNSRE---RALPSWLAFN Mb0185c|M.bovis_AF2122/97 AGAGSPKGSCDTRQVLCDSHE---RALPSWLAFN Rv0179c|M.tuberculosis_H37Rv AGAGSPKGSCDTRQVLCDSHE---RALPSWLAFN MMAR_0422|M.marinum_M AGAGAPKGSCDTRQVLCDSHE---RALPSWLAFN MAV_5005|M.avium_104 AGAGSPRGSCDTRQVLCDSHE---RALPSWLAFN Mflv_0698|M.gilvum_PYR-GCK AGAGAPRGSCDTMAVLCDSRE---RAQPAWLAFN Mvan_0144|M.vanbaalenii_PYR-1 AGAGSPRGSCDTMAVLCDSRE---RAQPAWLAFN MAB_4562|M.abscessus_ATCC_1997 AGYGSPKGNCDTTYTLCDAAGGVGRALPSWLGFS :* *:*:*.*** .**:: ** *:**.*.