For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
HPITYYPVDTQRLVRSNAERIRHKPYAHYFNPDVAVPEEVFAALKAPLEPEQVLGTSSTELNRLLEPGYL EGETGYCGLPDGAGYTSSLVRFPGATPEMFRWWFWWHSFEPERYSLWHPWCHADIWRTDPETETAPNLTD EQRYVGSTHHINEYIGQDPLDIEITFIDPARWGFDADGFAAAGIGAHACGSVLMKGSHMRLATMVHLARI TDDGFELRSRYWIADRAEPRHDPVAGIAQLTTVPGFSGERQAYEQLVHDQTEFNHLATFLPDIYQEFGPR *
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_4487c | - | - | 100% (281) | hypothetical protein MAB_4487c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1804 | - | 6e-32 | 33.08% (260) | hypothetical protein Mb1804 |
| M. gilvum PYR-GCK | Mflv_0511 | - | 2e-30 | 34.62% (260) | hypothetical protein Mflv_0511 |
| M. tuberculosis H37Rv | Rv1775 | - | 6e-32 | 33.08% (260) | hypothetical protein Rv1775 |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_2484 | - | 1e-11 | 26.96% (230) | hypothetical protein MSMEG_2484 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_0157 | - | 3e-28 | 34.10% (261) | hypothetical protein Mvan_0157 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0511|M.gilvum_PYR-GCK ---------MGTRAYLGYRGDDAKTPWGEFFNPEMAPLPAHVVDALHHGP
Mvan_0157|M.vanbaalenii_PYR-1 ----------MAHAYLGYRGDDGNTEYGGFFDPQMAALPAHVVDALHHGP
Mb1804|M.bovis_AF2122/97 ---------MASDLYLGYRNDDADTPFGKFFKPEMAPLPQHVVVALQHGP
Rv1775|M.tuberculosis_H37Rv ---------MASDLYLGYRNDDADTPFGKFFKPEMAPLPQHVVVALQHGP
MAB_4487c|M.abscessus_ATCC_199 MHPITYYPVDTQRLVRSNAERIRHKPYAHYFNPDVA-VPEEVFAALKAPL
MSMEG_2484|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_0511|M.gilvum_PYR-GCK QADQVLLGFDSAAE-LLEAGYHQTETGYGHLPNGAFQVSVRTDMPGVTPR
Mvan_0157|M.vanbaalenii_PYR-1 QAEPVLLRLDSAAT-LLGDGYHETENGYGRLANGAFQVSVRTDMPGVTPQ
Mb1804|M.bovis_AF2122/97 QAGMALLAFDDAAS-IVDEGYQQTENGYGILGDGSMQVSVRTDMPGVTPA
Rv1775|M.tuberculosis_H37Rv QAGMALLAFDDAAS-IVDEGYQQTENGYGILGDGSMQVSVRTDMPGVTPA
MAB_4487c|M.abscessus_ATCC_199 EPEQVLGTSSTELNRLLEPGYLEGETGYCGLPDGAGYTSSLVRFPGATPE
MSMEG_2484|M.smegmatis_MC2_155 -------MTTIDWNELLDPLPLPMETGYRRLDDGTLHIAARTDMHDCKTA
:: *.** * :*: : . : . ..
Mflv_0511|M.gilvum_PYR-GCK MWDWWFGWHGTDTRRYKLWHPRAHASARWADGGGDG--------HYVGRT
Mvan_0157|M.vanbaalenii_PYR-1 MWDWWFGWHGSDTRRYKLWHPRAHASARWADGGGDG--------HYVGRI
Mb1804|M.bovis_AF2122/97 MWAWWFGWHGSDTRRYKLWHPRAHLSARWKDGDQDSGAGRRGAQRYVGRW
Rv1775|M.tuberculosis_H37Rv MWAWWFGWHGSDTRRYKLWHPRAHLSARWKDGDQDSGAGRRGAQRYVGRW
MAB_4487c|M.abscessus_ATCC_199 MFRWWFWWHSFEPERYSLWHPWCHADIWRTDPETETAPNLTDEQRYVGST
MSMEG_2484|M.smegmatis_MC2_155 MFEWWFRWR-CDTQKYIWWHPIDHVSSHWAGDLSPD--------THVGSE
*: *** *: :..:* *** * . . :**
Mflv_0511|M.gilvum_PYR-GCK SLIEEYLGSSYAKAAIRFVEPDKIGVPAQR-------LGDSVAVCARLGS
Mvan_0157|M.vanbaalenii_PYR-1 SLIEEYLGSAYAKAAIRFIDPAAMGLDVN--------PGDSVSVCARLGS
Mb1804|M.bovis_AF2122/97 SMISEYIGSTKLGAAIQFVEPAAMGLPDD--------SDDTVSICARLGS
Rv1775|M.tuberculosis_H37Rv SMISEYIGSTKLGAAIQFVEPAAMGLPDD--------SDDTVSICARLGS
MAB_4487c|M.abscessus_ATCC_199 HHINEYIGQDPLDIEITFIDPARWGFDADGF----AAAGIGAHACGSVLM
MSMEG_2484|M.smegmatis_MC2_155 HIVVERFADAPAAELVIQFHGADDVFDAERYRTAVDRGDVSGSVLGRVGT
: * :.. : .. . : . . :
Mflv_0511|M.gilvum_PYR-GCK -------SEVPVDIGWFVHHIRRTPQGAEMRSRFWMGGPYVGVRHGNLFA
Mvan_0157|M.vanbaalenii_PYR-1 -------SEVPVDIGWFVHQVRSTSAGAEMRSRFWMGGPYVGIRHGNLLA
Mb1804|M.bovis_AF2122/97 -------ADAPVDAGWFVHQVRSTPGGSEMRSRFWMGGPHIAVRKAPEVA
Rv1775|M.tuberculosis_H37Rv -------ADAPVDAGWFVHQVRSTPGGSEMRSRFWMGGPHIAVRKAPEVA
MAB_4487c|M.abscessus_ATCC_199 -------KGSHMRLATMVHLARITDDGFELRSRYWIAD-RAEPRHDPVAG
MSMEG_2484|M.smegmatis_MC2_155 GHHPPRDTSGKILGGRLLHVGRDTPWGFALRSHFHLGTDLPAMG---LTA
: . ::* * * * :**:: :. .
Mflv_0511|M.gilvum_PYR-GCK NSMVRPVAARQL----PDPRDLLVHCAQEMNHLAGFLPALHARFG-----
Mvan_0157|M.vanbaalenii_PYR-1 NTVIRPVAARQL----PDPRDLLVHCAQEMNHLAGFLPALHARFG-----
Mb1804|M.bovis_AF2122/97 SKAVRPIASKLIGVSESTARNLLVYCAQEMNHLAGFLADLWESFGDE---
Rv1775|M.tuberculosis_H37Rv SKAVRPIASKLIGVSESTARNLLVYCAQEMNHLAGFLADLWESFGDE---
MAB_4487c|M.abscessus_ATCC_199 IAQLTTVPGFSG---ERQAYEQLVHDQTEFNHLATFLPDIYQEFGPR---
MSMEG_2484|M.smegmatis_MC2_155 SEVAAEVPDELG-------RNLLLHAYNEFTFLSRILGGLYVAENRDKIP
:. : *:: *:..*: :* : .
Mflv_0511|M.gilvum_PYR-GCK -----
Mvan_0157|M.vanbaalenii_PYR-1 -----
Mb1804|M.bovis_AF2122/97 -----
Rv1775|M.tuberculosis_H37Rv -----
MAB_4487c|M.abscessus_ATCC_199 -----
MSMEG_2484|M.smegmatis_MC2_155 PVAPW