For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSNLVWTRRSPFAEFDALVRQSFGPATSWPTPGFVPSADVVKDGDDALVRLDLPGVDVGKDVTVEVERGT LVVSGERRDERAEQTEGRTLREVRYGTFRRTFTLPTHVTGDAISASYDAGILTVKVAGAYANAAAQKIEI TT
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_4402 | - | - | 100% (142) | heat shock protein Hsp20 |
| M. abscessus ATCC 19977 | MAB_3467c | - | 1e-08 | 29.75% (121) | heat shock protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0257c | hsp | 2e-37 | 54.43% (158) | heat shock protein hsp (heat-stress-induced ribosome-binding |
| M. gilvum PYR-GCK | Mflv_0388 | - | 6e-37 | 54.01% (137) | heat shock protein Hsp20 |
| M. tuberculosis H37Rv | Rv0251c | hsp | 2e-37 | 54.43% (158) | heat shock protein hsp (heat-stress-induced ribosome-binding |
| M. leprae Br4923 | MLBr_01795 | hsp18 | 1e-07 | 27.07% (133) | 18 KDA antigen (HSP 16.7) |
| M. marinum M | MMAR_0515 | hsp | 5e-40 | 58.17% (153) | heat shock protein Hsp |
| M. avium 104 | MAV_4906 | - | 4e-42 | 58.50% (147) | Hsp20/alpha crystallin family protein |
| M. smegmatis MC2 155 | MSMEG_0424 | - | 2e-44 | 62.50% (136) | Hsp20/alpha crystallin family protein |
| M. thermoresistible (build 8) | TH_1919 | hsp | 5e-37 | 54.96% (131) | HEAT SHOCK PROTEIN HSP (HEAT-STRESS-INDUCED RIBOSOME-BINDING |
| M. ulcerans Agy99 | MUL_1178 | hsp | 6e-40 | 58.17% (153) | heat shock protein Hsp |
| M. vanbaalenii PYR-1 | Mvan_0296 | - | 2e-42 | 59.44% (143) | heat shock protein Hsp20 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0257c|M.bovis_AF2122/97 ----MNNLALWSR-PVWDVEP-----WDRWLRDFFGPA---ATTDWYRPV
Rv0251c|M.tuberculosis_H37Rv ----MNNLALWSR-PVWDVEP-----WDRWLRDFFGPA---ATTDWYRPV
MMAR_0515|M.marinum_M ----MSNLALWSR-PAWSTD--------RWLRDFFGPA---AASDWYKPL
MUL_1178|M.ulcerans_Agy99 ----MSNLALWSR-PAWSTD--------RWLRDFFGPA---AASDWYKPL
MAV_4906|M.avium_104 ----MSNLALWTR-PAWDTD--------RWLRDFFGPA---AAADWNKPA
Mflv_0388|M.gilvum_PYR-GCK MSTVLNNKALWRR-PAFDTD--------RFVREFFGPA---TAGEWAA--
Mvan_0296|M.vanbaalenii_PYR-1 ----MSNVALWTR-PAWNTD--------RFVRDFFGPA---TATEWAK--
MSMEG_0424|M.smegmatis_MC2_155 MSTLMKTPAVWTR-PAWQLD--------NWVRDFFGP-----ADDWFK--
TH_1919|M.thermoresistible__bu ----MSNLMLRNR-PVLDMALDIDRWFNGWLRDLFGPMRDQVTGDWWT--
MAB_4402|M.abscessus_ATCC_1997 ----MSNLVWTRRSPFAEFD--------ALVRQSFGPA-----TSWPTP-
MLBr_01795|M.leprae_Br4923 --------MLMRTDPFRELD--------RFAEQVLGTS------------
* . .: :*.
Mb0257c|M.bovis_AF2122/97 AGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGE
Rv0251c|M.tuberculosis_H37Rv AGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGE
MMAR_0515|M.marinum_M DTGFNPAAEIVKDGDDAVVRLELPGVDVENDVNVEVERGE----LVIRGE
MUL_1178|M.ulcerans_Agy99 ATGFNPAAEIVKDGDDAVVRLELPGVDVENDVNVEVERGE----LVIRGE
MAV_4906|M.avium_104 TSAFKPAAEIVKDGDDAIVRVELPGVDVDQDVQVELDRGR----LVIRGE
Mflv_0388|M.gilvum_PYR-GCK --GINPAVEVDRDGEDAVIRVDLPGVDVAKDVTVEVDQGR----LVIRGE
Mvan_0296|M.vanbaalenii_PYR-1 --GINPAVEVTKDGDDAVVRVDLPGVDVDKDVNVEVDKGR----LVIRGE
MSMEG_0424|M.smegmatis_MC2_155 --GFTPAAEVTRDGEDAVVSVELPGVDVGKDVNVEVDRGR----LVIHGE
TH_1919|M.thermoresistible__bu -AEFTPAAEVVRDGDDAVIRLELPGVDIKRDVNVELEDGR----LVIHGE
MAB_4402|M.abscessus_ATCC_1997 --GFVPSADVVKDGDDALVRLDLPGVDVGKDVTVEVERGT----LVVSGE
MLBr_01795|M.leprae_Br4923 ARPAVMPMDAWREGEEFVVEFDLPGIKADS-LDIDIERNV----VTVRAE
. : ::*:: :: .:***:. : :::: . :.: .*
Mb0257c|M.bovis_AF2122/97 HRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLT
Rv0251c|M.tuberculosis_H37Rv HRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLT
MMAR_0515|M.marinum_M HRDEHAQEAGEADRRTLREIRYGSFRRSFQLPEHVTSEAVSASYDAGVLT
MUL_1178|M.ulcerans_Agy99 HRDEHAQEAGEANRRTLREIRYGSFRRSFQLPEHVTSEAVSASYDAGVLT
MAV_4906|M.avium_104 HRDEHAEEK---DGRTLREIRYGSFHRSFQLPGHVTDDDITASYDAGVLT
Mflv_0388|M.gilvum_PYR-GCK RRDMKVEDDTERAGRKVSEVRYGSFHRSFRLPSHVSGDAVSAGYEAGVLT
Mvan_0296|M.vanbaalenii_PYR-1 RRDQRSE---EAEGRKISEVRYGAFHRSFALPAHVTGEAVSASYDAGVLT
MSMEG_0424|M.smegmatis_MC2_155 RRDERSE---ESDGRTYSEVRYGSFRREFKLPAHVTGDAVTASYDAGVLK
TH_1919|M.thermoresistible__bu RRDEHEE---NRDGRYLRELRYGSFRRSFALPANVTKDDISATYEAGVLT
MAB_4402|M.abscessus_ATCC_1997 RRDERAE---QTEGRTLREVRYGTFRRTFTLPTHVTGDAISASYDAGILT
MLBr_01795|M.leprae_Br4923 RPGVDPD-----REMLAAERPRGVFNRQLVLGENLDTERILASYQEGVLK
: . : * * *.* : * :: : : * *: *:*.
Mb0257c|M.bovis_AF2122/97 VRVAGAYKAPAETQAQRIAITK------------------
Rv0251c|M.tuberculosis_H37Rv VRVAGAYKAPAETQAQRIAITK------------------
MMAR_0515|M.marinum_M VRVQGAYRDPAASEPQRIAITK------------------
MUL_1178|M.ulcerans_Agy99 VRVQGAYRDPAASEPQRIAITK------------------
MAV_4906|M.avium_104 VRVTGAY---AGNQAKRIAITK------------------
Mflv_0388|M.gilvum_PYR-GCK VRVAGAH---KGAEPQRVAIESR-----------------
Mvan_0296|M.vanbaalenii_PYR-1 VRVAGAH---RGAEAHRVAIESK-----------------
MSMEG_0424|M.smegmatis_MC2_155 VRVAGAY---AGEQPQRIAIESR-----------------
TH_1919|M.thermoresistible__bu VRVAGAH---AGTERERIAIEAK-----------------
MAB_4402|M.abscessus_ATCC_1997 VKVAGAY---ANAAAQKIEITT------------------
MLBr_01795|M.leprae_Br4923 LSIPVAER----AKPRKISVDRGNNGHQTINKTAHEIIDA
: : * .:: :