For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSTPSVTETAAARVLLFGTRRLPRILRDLPVDRVDGSGAVRALVDALPDGPARFIVVGGDGDLGQVLTRL MRAERLDVELGFVPDRPSRARRIYRIGFGAARRARRGRAQRVPLIRDDTGTALAGRASWQSSDGTPVTGE ATVDDTLLFDGAALVDVEPTESMPGLRASVRGRTRLLPRRWVTGRAAQLGTVGAVVVRDGVAGPRPVTRS TFYRHQQSWLLVR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4250 | - | - | 100% (223) | hypothetical protein MAB_4250 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0365 | - | 1e-52 | 54.67% (214) | hypothetical protein Mb0365 |
M. gilvum PYR-GCK | Mflv_0229 | - | 8e-46 | 54.33% (208) | hypothetical protein Mflv_0229 |
M. tuberculosis H37Rv | Rv0358 | - | 1e-52 | 54.67% (214) | hypothetical protein Rv0358 |
M. leprae Br4923 | MLBr_00281 | - | 6e-47 | 51.14% (219) | hypothetical protein MLBr_00281 |
M. marinum M | MMAR_0679 | - | 4e-50 | 49.33% (223) | hypothetical protein MMAR_0679 |
M. avium 104 | MAV_4780 | - | 3e-57 | 58.72% (218) | hypothetical protein MAV_4780 |
M. smegmatis MC2 155 | MSMEG_0758 | - | 5e-45 | 52.48% (202) | hypothetical protein MSMEG_0758 |
M. thermoresistible (build 8) | TH_0135 | - | 1e-49 | 54.50% (222) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_2835 | - | 9e-51 | 49.33% (223) | hypothetical protein MUL_2835 |
M. vanbaalenii PYR-1 | Mvan_0676 | - | 5e-45 | 49.77% (219) | hypothetical protein Mvan_0676 |
CLUSTAL 2.0.9 multiple sequence alignment MAB_4250|M.abscessus_ATCC_1997 ----MSTPSVTETAAARVLLFGTRRLPR---ILRDLPVDRVDGSGAVRAL TH_0135|M.thermoresistible__bu ------------LTAHEVLLFGGRELPR---PLADLPVC----ADPDRDD Mflv_0229|M.gilvum_PYR-GCK ----------MDPSSIAVVRPGARRVPR---SLRDLPVLTG----TGSDL Mvan_0676|M.vanbaalenii_PYR-1 ----------MDLSTVAIVRLGQRRVPR---ALRDLPVLD-------SAD MSMEG_0758|M.smegmatis_MC2_155 -------------------------MPR---PLRGLPTVG---------- Mb0365|M.bovis_AF2122/97 ------MYTAENAPGVAVLLSGDADVPG---PLTGLPTHQD--------N Rv0358|M.tuberculosis_H37Rv ------MYTAENAPGVAVLLSGDADVPG---PLTGLPTHQD--------N MMAR_0679|M.marinum_M MGSNMGVKSAANTPSMAVLVFDGQAVPA---PLTGLPTHQVG----DSAS MUL_2835|M.ulcerans_Agy99 MGSNMGVKSAANTPSMAVLVFDGQAVPA---ALTGLPTHQVG----DSAS MLBr_00281|M.leprae_Br4923 ------MNTSDSAPGVAVLLFGDDRTRQRWNTLTALSTYRAGGP-DDIDS MAV_4780|M.avium_104 --------MTQQDRAAAVLQFGRRRGYR---PLRGMPTHRVAG----DTD * :.. MAB_4250|M.abscessus_ATCC_1997 VDALPDGPARFIVVGGDGDLGQVLTRLMRAERLDVELGFVPDRPSRARRI TH_0135|M.thermoresistible__bu IDAAAARADRLIVVGTQADLAAVLTRLMRTERLHVELAHVHGGPLTSR-- Mflv_0229|M.gilvum_PYR-GCK SDDITG-YRRLLVVGSDRDLSAVLTKLLRADRLDIEVAHLRRP------- Mvan_0676|M.vanbaalenii_PYR-1 ADGLVG-YRRLVVVGTHRDLSQVLTRLLRADRLDIEVAHVRHP------- MSMEG_0758|M.smegmatis_MC2_155 IDDVDA-HHRVIVTGSAGDLAAVLTRLLKADRLDVEVAHARTS------- Mb0365|M.bovis_AF2122/97 LDTVIGRYSRLIVVGADADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRA Rv0358|M.tuberculosis_H37Rv LDTVIGRYSRLIVVGADADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRA MMAR_0679|M.marinum_M IDAALAAYPRLAVIGDDADLAAVLTRLLRTDRLDIEVAYVPRRRTTATRV MUL_2835|M.ulcerans_Agy99 IDAALAAYPRLAVIGGDADLAAMLTRLLRTDRLDIEVAYVPRRRTTATRV MLBr_00281|M.leprae_Br4923 IDATIGPYRRLVVVGGDGDLAAVLGRLLRADRLDIEVAYVPHQRTAATRV MAV_4780|M.avium_104 VDAAIGPYRRLIVLGGDAELALVLTRLLRAERLDVEVAFVPRRRTRATRN * *. * * :*. :* :*::::**.:*:.. MAB_4250|M.abscessus_ATCC_1997 YRI--GFGAARRARRGRAQRVPLIRDDTGTALAGRASWQS-SDGTPVTGE TH_0135|M.thermoresistible__bu -------LRARRARTRPARRIPLVRDETGVAIVGSAEWHPESSGKPLHGE Mflv_0229|M.gilvum_PYR-GCK -------WAARAARTAPAGRVPLIRDETGTVIAGAALWLPPDGARTVRGE Mvan_0676|M.vanbaalenii_PYR-1 -------WQGRRTRTQAATRVPLIRDETGAVITEAALWLAPAGQRTLRGE MSMEG_0758|M.smegmatis_MC2_155 -------WSARRALRGTARRVPLIRDETGTVLVSAAEWHG-KEAAPLEGE Mb0365|M.bovis_AF2122/97 YRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGE Rv0358|M.tuberculosis_H37Rv YRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGE MMAR_0679|M.marinum_M YRLAAGRRGAWRARRGSAGRVPLIRDETATVIVGRARWLPADDEQTIHGE MUL_2835|M.ulcerans_Agy99 YRLAAGRRGAWRARRGSAGRVPLIRDETATVIVGRARWLPADDEQTIHGE MLBr_00281|M.leprae_Br4923 YRLPTGRRAARRARRGYATRVPLIRDETGSVIVGRADWLPVVDRQPLHGE MAV_4780|M.avium_104 YRLPTGFRAARRAARGAARRVPLIRDETGSAIVGRACWAAPGGQGWLHGE . : * *:**:**:*. .:. * * : ** MAB_4250|M.abscessus_ATCC_1997 ATVDDTLLFDG-AALVDVEPTESMPGLRASVRGRTRLLP-----RRWVTG TH_0135|M.thermoresistible__bu GIVDDTVLFDGDVSRVRIEPIPLMPGLRAAVLS-DRGRP-----VRWVIG Mflv_0229|M.gilvum_PYR-GCK AIVDDERLFDGDVTGVRIEPTTAMPGLRATVLT-GPMRP-----KRWISG Mvan_0676|M.vanbaalenii_PYR-1 AVVDDERLFDGEVTGVRVEPTAAMPGLRAGVFS-GRARP-----KRWISG MSMEG_0758|M.smegmatis_MC2_155 AIVDDTVLFDGQAHGVRIEPLDAVPGLRASVLS-RRGRP-----LGWVSG Mb0365|M.bovis_AF2122/97 AVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDG---AGK----WRRWIGG Rv0358|M.tuberculosis_H37Rv AVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDG---AGK----WRRWIGG MMAR_0679|M.marinum_M AVVDDNTLFDGDIAGVYIQPTLELPGLRAALHE---RRP----WRRWIGG MUL_2835|M.ulcerans_Agy99 AVVDDNTLFDGDIAGVYIQPTLELPGLRAALHE---RRP----WRRWIGG MLBr_00281|M.leprae_Br4923 AIVDDIPLFDGDVAGVRIAPTLAMPGLRARLHT---SRTGIGIWSRWLTG MAV_4780|M.avium_104 AVVDDTTLFDGDVTAVWIEPTAAMPGLRAAVA----GRP----WRRWVTG . *** **** * : * :***** : *: * MAB_4250|M.abscessus_ATCC_1997 RAAQLGTVGAVVVRDGVAGPRPVTRSTFYRHQQSWLLVR-- TH_0135|M.thermoresistible__bu RAAQLGTTGARVVRDGVVGPRTVRRSTFYRHTEGWLQVR-- Mflv_0229|M.gilvum_PYR-GCK RAAQLGTSGAMVVRDGEPAKRPVRRSTFYRHTQGWLRVGRG Mvan_0676|M.vanbaalenii_PYR-1 RAAQLGTTGTLVVRDGVPGKRPVRRSTFYRHTEGWLRVGRG MSMEG_0758|M.smegmatis_MC2_155 RAAQLGTPGAVVVRDGATMARPVRRSTFYRHTQGWLRVG-- Mb0365|M.bovis_AF2122/97 RAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR-- Rv0358|M.tuberculosis_H37Rv RAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR-- MMAR_0679|M.marinum_M RAAQLGTSGARVIRDGIPAPRAVRRSTFYRNVEGWLLVR-- MUL_2835|M.ulcerans_Agy99 RAAQLGTSGARVIRDGIPTPRAVRRSTFYRNVEGWLLVR-- MLBr_00281|M.leprae_Br4923 RAVQLGSTGVAVVRDGVPTRRRERRSTFYRNVEGWMLVR-- MAV_4780|M.avium_104 RAAQLGSTGATVLRDGVPADRPARRSAFYRNIEGWLLVR-- **.***: *. *:*** * **:***: :.*: *