For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTDIVERALTLDDADPEELAEMAEEPNPGSAETQTTGKAAKKKTAKTVKAVERTADPVIGEGDDDSGPGI WKWIAIGLLALGIIGALLGVWQYQKLSDTLATVRSADAERTAATDAASAYAMKSLTYSYEDPDGFFKAVK ENAAEPLKNKYNDAEKLLKAIMLQAQVTSKGEIIASDAVAQQNGIYQVIVTTRQTTRNVQNPEPRATTLV LQITVKKDGDAWQVTDIGPKNASSTGTIMHPGDQKLMPEGPEAPAAPGKTPAPGLPPLPVLPGQK
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_4036 | - | - | 100% (275) | hypothetical protein MAB_4036 |
| M. abscessus ATCC 19977 | MAB_1004c | - | 5e-10 | 22.97% (222) | hypothetical protein MAB_1004c |
| M. abscessus ATCC 19977 | MAB_4534c | - | 2e-05 | 23.26% (172) | hypothetical protein MAB_4534c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_2107 | - | 3e-06 | 23.47% (213) | hypothetical protein Mflv_2107 |
| M. tuberculosis H37Rv | Rv1972 | - | 2e-05 | 19.75% (157) | mce associated membrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_4686 | - | 8e-06 | 20.86% (163) | hypothetical protein MMAR_4686 |
| M. avium 104 | MAV_5046 | - | 7e-10 | 27.45% (153) | hypothetical protein MAV_5046 |
| M. smegmatis MC2 155 | MSMEG_0353 | - | 3e-09 | 24.74% (190) | hypothetical protein MSMEG_0353 |
| M. thermoresistible (build 8) | TH_0161 | - | 3e-09 | 23.48% (230) | conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_3924 | - | 1e-06 | 22.98% (235) | Mce associated membrane protein |
| M. vanbaalenii PYR-1 | Mvan_0965 | - | 4e-05 | 19.61% (204) | hypothetical protein Mvan_0965 |
CLUSTAL 2.0.9 multiple sequence alignment
TH_0161|M.thermoresistible__bu ------VTLTDEDRDRTDRDETPEP------------ESSEQVVTETSAE
Mvan_0965|M.vanbaalenii_PYR-1 ------MSVTT-DRDLDDEKTDGEE------------DTTSQEEPDGTED
Mflv_2107|M.gilvum_PYR-GCK ---MADDAAAPEG-ELTDAQEREAST------AAEPTDTDID---TEDTE
MUL_3924|M.ulcerans_Agy99 ---MSDSTTLEEQPEPAEVVEPEGESGQAGVPEAQPRDEDQDETADETQE
Rv1972|M.tuberculosis_H37Rv ---------------------------------------------MSVAV
MMAR_4686|M.marinum_M ---------------------------------------------MTAEQ
MSMEG_0353|M.smegmatis_MC2_155 ---------------------------------------------MLAAQ
MAB_4036|M.abscessus_ATCC_1997 MTDIVERALTLDDADPEELAEMAEEP--------NPGSAETQTTGKAAKK
MAV_5046|M.avium_104 ------MPAVDTEHRTDDKTAAADDG---------RTIEAIDTDTKDTQL
TH_0161|M.thermoresistible__bu EAGETGETGETGETEKTGEPGEPGPAARSRRAGWLRVGAVTAVFVVLLGL
Mvan_0965|M.vanbaalenii_PYR-1 SAAEDQQP----EDSASGDPG-PEAGNRSWRR-RVLAGAIAAVTIGAVAT
Mflv_2107|M.gilvum_PYR-GCK DADA-PEAVEDDSVDADVDETDATPATGAMSHIKLALIAGLVGVLALAGL
MUL_3924|M.ulcerans_Agy99 DADADPEAGEDDAQASDGEQESPKPAP---SKVRLAIVVGLAAVVAMAAL
Rv1972|M.tuberculosis_H37Rv DSDAEDDAVSEIAEAAGVSPAPAKPSM---SAPRRMLLFGLVVVVALAVL
MMAR_4686|M.marinum_M TSVEQQKPDESPGPEPLERRRAWLHKLTPGKVVVAVVGLLVAAALGLLAA
MSMEG_0353|M.smegmatis_MC2_155 EVSEPEAAQPQSDSGPRRSVRVLAYVVIP----LLIVGLAACAGY-----
MAB_4036|M.abscessus_ATCC_1997 KTAKTVKAVERTADPVIGEGDDDSGPGIWKWIAIGLLALGIIGALLGVWQ
MAV_5046|M.avium_104 DDHEQKDTKAEKFERRVSKAPRQLSISLRAAAFGSVVCILAATAGVFAWL
.
TH_0161|M.thermoresistible__bu CGFLGWQVWQQRQLDRAADEARQAAVEYARILTSIDADKVDENFAQVLDG
Mvan_0965|M.vanbaalenii_PYR-1 AGYLGWLLWQQNQVSRAGEQAQAAAVQYAQILTSIDSAKVDENFDQVLDG
Mflv_2107|M.gilvum_PYR-GCK AGWLGYQTYESHQAEEQRNLFVQVGRQGALNLTTINWESAEADVQRILDS
MUL_3924|M.ulcerans_Agy99 ASWFGFHAYQSHQADQQRKLYVQVARQGAINLTTIDWEHVDADIERILNS
Rv1972|M.tuberculosis_H37Rv LCCWGFRVQRARHAQDQRGHFLQAARQCALNLTTIDWRNAEADVRRILDG
MMAR_4686|M.marinum_M LFVFSYRPDREVDAQAAG-AAVSAASDGAIAILSYSPDTLDRDFSSARSH
MSMEG_0353|M.smegmatis_MC2_155 ---LQWRSSSMRAAQAANVSAVPAATDSTIKMLSYKPDTVQKDLELAAEG
MAB_4036|M.abscessus_ATCC_1997 YQKLSDTLATVRSADAERTAATDAASAYAMKSLTYSYEDPDGFFKAVKEN
MAV_5046|M.avium_104 YWGAHDELAAQHRATNDRNHAEEIATDYAVNAAEMDFQDFNGWKLKLING
. : . : .
TH_0161|M.thermoresistible__bu ATGEFRDMYSASSAQLRQLLIDNK-ASARGVVLESAVQSAGEDEVVVLLF
Mvan_0965|M.vanbaalenii_PYR-1 ATGEFKDMYSQSSVQLRQLLIDNK-ASAHGVVVDSAIQSESKDKVVVLLF
Mflv_2107|M.gilvum_PYR-GCK ATGTFYDDFQQRAEPFVQVVKQAQ-SKSEGTIAEAGLESATDSEGQVLVA
MUL_3924|M.ulcerans_Agy99 ATGTFYDDFQRRSKPFIKVVQHFQ-SKSVGTITAAALESESDDAAQVLVA
Rv1972|M.tuberculosis_H37Rv ATGEFYNDFAQRSQPFVEVLRHAK-ASTVGTITEAGLQTQTADTAQALVA
MMAR_4686|M.marinum_M LTGEFLSYYDQFTQQIVAPAAKRKSVRTSAVVLRAAISELHPDSAVVLLF
MSMEG_0353|M.smegmatis_MC2_155 LTGPFRDDYNSLIHDVVIPGAQEKQISAVATVPAAAVVSATGNRAVVMVF
MAB_4036|M.abscessus_ATCC_1997 AAEPLKNKYNDAEKLLKAIMLQAQ-VTSKGEIIASDAVAQQNGIYQVIVT
MAV_5046|M.avium_104 TSPELKDKLTKAADSMQQILGPLQ-WKSTARPLAAIVRSDNGGVYVVDSF
: : . . : : . : . .
TH_0161|M.thermoresistible__bu IDQTVSNAHVPEPRIDRSRVKMTMRHVDGTWRASKVALP-----------
Mvan_0965|M.vanbaalenii_PYR-1 VDQSVSNTSVPDPRIDRSRVKMTMEYVDGRWRASKVELP-----------
Mflv_2107|M.gilvum_PYR-GCK VTVRTTNAGTPEQQPRAWRMRISVQEIDGDAKVSNVEFVP----------
MUL_3924|M.ulcerans_Agy99 VSVKTTTAAAPEQRPRAWRMRITVQQVGDEAKVANVEFVP----------
Rv1972|M.tuberculosis_H37Rv VSVQTSNAGEADPVPRAWRMRITVQRVGDRVKVSDVGFVP----------
MMAR_4686|M.marinum_M VNQTTQSADRPEPALTSSSVLVKLTKANGKWLISSFDPV-----------
MSMEG_0353|M.smegmatis_MC2_155 VNQTTIVGADP-PTSTASTVRVTMDKVGERWLVSDFTPI-----------
MAB_4036|M.abscessus_ATCC_1997 TRQTTRNVQNPEPRATTLVLQITVKKDGDAWQVTDIGPKNASSTGTIMHP
MAV_5046|M.avium_104 VSVLTKTVQAPEGLQSTATYSITLDS-KHNWQITDVGGIDAALRK-----
. . :.: :..
TH_0161|M.thermoresistible__bu ----------------------------------
Mvan_0965|M.vanbaalenii_PYR-1 ----------------------------------
Mflv_2107|M.gilvum_PYR-GCK ----------------------------------
MUL_3924|M.ulcerans_Agy99 ----------------------------------
Rv1972|M.tuberculosis_H37Rv ----------------------------------
MMAR_4686|M.marinum_M ----------------------------------
MSMEG_0353|M.smegmatis_MC2_155 ----------------------------------
MAB_4036|M.abscessus_ATCC_1997 GDQKLMPEGPEAPAAPGKTPAPGLPPLPVLPGQK
MAV_5046|M.avium_104 ----------------------------------