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SKNSKAYREAAEKVDREKLYTPLEATKLAKETSSKKYDATVEVAMRLGVDPRKADQMVRGTVNLPHGTGK TARVIVFAVGDKAEAAAAAGADVVGSDDLIERIQGGWVDFDAAIATPDQMAKVGRIARVLGPRGLMPNPK TGTVTPDVAKAVTDIKGGKINFRVDKHSNLHLIIGKASFDAEKLTENYGAVLDEILRAKPSSAKGRYLKK VVVSTTTGPGIQVDPGVTRNFLEA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_3892c | rplA | - | 100% (235) | 50S ribosomal protein L1 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0660 | rplA | 1e-110 | 84.05% (232) | 50S ribosomal protein L1 |
| M. gilvum PYR-GCK | Mflv_5115 | rplA | 1e-115 | 86.75% (234) | 50S ribosomal protein L1 |
| M. tuberculosis H37Rv | Rv0641 | rplA | 1e-111 | 84.48% (232) | 50S ribosomal protein L1 |
| M. leprae Br4923 | MLBr_01904 | rplA | 1e-110 | 82.48% (234) | 50S ribosomal protein L1 |
| M. marinum M | MMAR_0974 | rplA | 1e-113 | 84.68% (235) | 50S ribosomal protein L1, RplA |
| M. avium 104 | MAV_4520 | rplA | 1e-112 | 84.26% (235) | 50S ribosomal protein L1 |
| M. smegmatis MC2 155 | MSMEG_1347 | rplA | 1e-116 | 88.94% (235) | 50S ribosomal protein L1 |
| M. thermoresistible (build 8) | TH_1863 | rplA | 1e-110 | 83.62% (232) | PROBABLE 50S RIBOSOMAL PROTEIN L1 RPLA |
| M. ulcerans Agy99 | MUL_0727 | rplA | 1e-111 | 83.83% (235) | 50S ribosomal protein L1 |
| M. vanbaalenii PYR-1 | Mvan_1236 | rplA | 1e-115 | 86.75% (234) | 50S ribosomal protein L1 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0660|M.bovis_AF2122/97 MSKTSKAYRAAAAKVDRTNLYTPLQAAKLAKETSSTKQDATVEVAIRLGV
Rv0641|M.tuberculosis_H37Rv MSKTSKAYRAAAAKVDRTNLYTPLQAAKLAKETSSTKQDATVEVAIRLGV
MLBr_01904|M.leprae_Br4923 MSKSSKAYRAAAVKVDRTNLYTPLQAAKLAKETSSTRQDATVEVAIRLGV
MMAR_0974|M.marinum_M MSKNSKAYRAAAEKVDRSNLYTPLQAAKLAKETSSTKQDATVEVAIRLGV
MUL_0727|M.ulcerans_Agy99 MSKNSKAYRAAAEKVDRSNPYTPLQAAKLAKETSSTKQDATVEVAIRLGV
MAV_4520|M.avium_104 MSKRSKAYRAAAEKVDRDNLYTPLQAAKLAKETSSTKQDATVEVAIRLGV
TH_1863|M.thermoresistible__bu MSKKSKAYREAAAKVDRDRLYHPLEAAKLAKETSSKKQDATVEVAIRLGV
Mflv_5115|M.gilvum_PYR-GCK MSKNSKAYKEAAEKIDRDRVYSPLEAAKLAKETSSKKQDATVEVAIRLGV
Mvan_1236|M.vanbaalenii_PYR-1 MSKNSKAYKEAAEKVDKTRLYSPLEAAKLAKETSSKKQDATVEVAIRLGV
MSMEG_1347|M.smegmatis_MC2_155 MSKNSKAYREAAEKVDRTKLYTPLEAAKLAKETSSKKQDATVEVAIRLGV
MAB_3892c|M.abscessus_ATCC_199 MSKNSKAYREAAEKVDREKLYTPLEATKLAKETSSKKYDATVEVAMRLGV
*** ****: ** *:*: . * **:*:********.: *******:****
Mb0660|M.bovis_AF2122/97 DPRKADQMVRGTVNLPHGTGKTARVAVFAVGEKADAAVAAGADVVGSDDL
Rv0641|M.tuberculosis_H37Rv DPRKADQMVRGTVNLPHGTGKTARVAVFAVGEKADAAVAAGADVVGSDDL
MLBr_01904|M.leprae_Br4923 DSRKADQMVRGTVNLPHGTGKTARVAVFAVGEKADVAVAAGADVVGSDDL
MMAR_0974|M.marinum_M DPRKADQMVRGTVNLPHGTGKTARVAVFAVGEKADAAVAAGADIVGSDDL
MUL_0727|M.ulcerans_Agy99 DPRKADQMVRGTVNLPHGTGKTARVAVFAVGEKADAAVAAGADIVGSDDL
MAV_4520|M.avium_104 DPRKADQMVRGTVNLPHGTGKTARVAVFAVGEKAEQAQAAGADIVGSDDL
TH_1863|M.thermoresistible__bu DPRKADQMVRGTVNLPHGTGKTARVAVFAVGEKAEEAKAAGADIVGSDDL
Mflv_5115|M.gilvum_PYR-GCK DPRKADQMVRGTVNLPHGTGKTARVAVFAVGEKAEAAVAAGADVVGSDDL
Mvan_1236|M.vanbaalenii_PYR-1 DPRKADQMVRGTVNLPHGTGKTARVAVFAVGDKAEQAEAAGADIVGSDDL
MSMEG_1347|M.smegmatis_MC2_155 DPRKADQMVRGTVNLPHGTGKTARVAVFAVGEKAEQAQAAGADIVGSDDL
MAB_3892c|M.abscessus_ATCC_199 DPRKADQMVRGTVNLPHGTGKTARVIVFAVGDKAEAAAAAGADVVGSDDL
*.*********************** *****:**: * *****:******
Mb0660|M.bovis_AF2122/97 IERIQGGWLEFDAAIAAPDQMAKVGRIARVLGPRGLMPNPKTGTVTADVA
Rv0641|M.tuberculosis_H37Rv IERIQGGWLEFDAAIATPDQMAKVGRIARVLGPRGLMPNPKTGTVTADVA
MLBr_01904|M.leprae_Br4923 IEKIQGGWLEFDAAVATPDQMAKVGRIARVLGPRGLMPNPKTGTVTPDVA
MMAR_0974|M.marinum_M IEKIQGGFLDFDAAIATPDQMAKVGRIARVLGPRGLMPNPKTGTVTPDVA
MUL_0727|M.ulcerans_Agy99 IEKIQGGFLDFDAVIATPDQMAKVGRIARVLGPRGLMPNPKTGTVTPDVA
MAV_4520|M.avium_104 IEKIQGGFLDFDAAIATPDQMAKVGRIARVLGPRGLMPNPKTGTVTPDVA
TH_1863|M.thermoresistible__bu IEQIQGGMLDFDAAIATPDQMAKVGRIARILGPRGLMPNPKTGTVTTDIA
Mflv_5115|M.gilvum_PYR-GCK IEKIQGGFLDFDAAIATPDQMAKVGRIARILGPRGLMPNPKTGTVTPDVT
Mvan_1236|M.vanbaalenii_PYR-1 IEKIQGGFLDFDAAIATPDQMAKVGRIARILGPRGLMPNPKTGTVTPDVA
MSMEG_1347|M.smegmatis_MC2_155 IEKIQGGFLDFDAAIATPDQMAKVGRIARVLGPRGLMPNPKTGTVTPDVA
MAB_3892c|M.abscessus_ATCC_199 IERIQGGWVDFDAAIATPDQMAKVGRIARVLGPRGLMPNPKTGTVTPDVA
**:**** ::***.:*:************:****************.*::
Mb0660|M.bovis_AF2122/97 KAVADIKGGKINFRVDKQANLHFVIGKASFDEKLLAENYGAAIDEVLRLK
Rv0641|M.tuberculosis_H37Rv KAVADIKGGKINFRVDKQANLHFVIGKASFDEKLLAENYGAAIDEVLRLK
MLBr_01904|M.leprae_Br4923 KAVADIKGGKINFRVDKQANLHFVIGKASFDEKRLAENYGAALEEVLRLK
MMAR_0974|M.marinum_M KAVADIKGGKINFRVDKQANLHFVIGKASFEENKLAENYGAAIDEVLRLK
MUL_0727|M.ulcerans_Agy99 KAVADIKGGKINFRVDKQANLHFVIGKASFEENKLAENYGAAIDEVLRLK
MAV_4520|M.avium_104 KAVADIKGGKINFRVDKQANLHFVIGKASFDEKALAENYGAALDEVLRLK
TH_1863|M.thermoresistible__bu KAVQDIKGGKINFRVDKAANLHLVIGKASFDEKALAENYGAALEEVLRAK
Mflv_5115|M.gilvum_PYR-GCK KAVNDIKGGKINFRVDKQANLHFVIGKASFDEKALAENYGAALDEILRAK
Mvan_1236|M.vanbaalenii_PYR-1 KAVSDIKGGKINFRVDKQANLHFVIGKASFDESKLAENYGAALDEVLRAK
MSMEG_1347|M.smegmatis_MC2_155 KAVQDIKGGKINFRVDKQANLHFIIGKASFDETKLAENYGAALDEVLRAK
MAB_3892c|M.abscessus_ATCC_199 KAVTDIKGGKINFRVDKHSNLHLIIGKASFDAEKLTENYGAVLDEILRAK
*** ************* :***::******: *:*****.::*:** *
Mb0660|M.bovis_AF2122/97 PSSSKGRYLKKITVSTTTGPGIPVDPSITRNFAGE----
Rv0641|M.tuberculosis_H37Rv PSSSKGRYLKKITVSTTTGPGIPVDPSITRNFAGE----
MLBr_01904|M.leprae_Br4923 PSSSKGRYLKKVTVSTTMGPGIPVDPSITRNFTEE----
MMAR_0974|M.marinum_M PSASKGRYLKKITVSTTTGPGIPVDPSVTRNFTEA----
MUL_0727|M.ulcerans_Agy99 PSASKGRYLKKITVSTTTGPGIPVDPSVTRNFTEA----
MAV_4520|M.avium_104 PSASKGRYLKKITVSTTTGPGIPVDPSITRNFAEA----
TH_1863|M.thermoresistible__bu PTASKGRYLKKIVMTTTTGPGIPVDPSVTRNFTTVDA--
Mflv_5115|M.gilvum_PYR-GCK PSSSKGRYLKKVVVSTTTGPGIPVDPTVTRNFTEEPAQS
Mvan_1236|M.vanbaalenii_PYR-1 PSSSKGRYLKKVVVSTTTGPGIPVDPSITRNFTEE----
MSMEG_1347|M.smegmatis_MC2_155 PSSSKGRYLKKVTVSTTTGPGIPVDPSVTRNFTEA----
MAB_3892c|M.abscessus_ATCC_199 PSSAKGRYLKKVVVSTTTGPGIQVDPGVTRNFLEA----
*:::*******:.::** **** *** :****