For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DSLTPGRGAAVLLADDVQAALFLMPSGELYAVGNIDPFGQAAVMSRGLTGDRGGEPTVASPLLKQVFSLI DGRCLDDASRRLPVFEVRVINGNVEIGMLRSRHRNAVAA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_3521c | - | - | 100% (110) | nitrite reductase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0259 | nirD | 3e-25 | 54.64% (97) | nitrite reductase |
| M. gilvum PYR-GCK | Mflv_0386 | - | 8e-25 | 56.12% (98) | nitrite reductase (NAD(P)H), small subunit |
| M. tuberculosis H37Rv | Rv0253 | nirD | 3e-25 | 54.64% (97) | nitrite reductase |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_0517 | nirD | 6e-24 | 52.00% (100) | nitrite reductase |
| M. avium 104 | MAV_4903 | nirD | 4e-27 | 59.18% (98) | nitrite reductase |
| M. smegmatis MC2 155 | MSMEG_0428 | - | 1e-27 | 61.86% (97) | nitrite reductase |
| M. thermoresistible (build 8) | TH_3223 | - | 2e-18 | 73.58% (53) | PUTATIVE - |
| M. ulcerans Agy99 | MUL_1180 | nirD | 1e-23 | 52.00% (100) | nitrite reductase |
| M. vanbaalenii PYR-1 | Mvan_0298 | - | 1e-26 | 57.73% (97) | nitrite reductase (NAD(P)H), small subunit |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0386|M.gilvum_PYR-GCK MTVENETRNGTGV----WITACRYDFLIPNRGVGVLLPEGEQAALFRLDD
Mvan_0298|M.vanbaalenii_PYR-1 MTLLNDVKT--------WTTACRYDFLIPNRGVGVLLPDGAQAALFRLDD
Mb0259|M.bovis_AF2122/97 MTLLNDIQV--------WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDD
Rv0253|M.tuberculosis_H37Rv MTLLNDIQV--------WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDD
MMAR_0517|M.marinum_M MTLLNDIQV--------WTTACAYDHLIPGRGVGVLLDDGSQAALFRLDD
MUL_1180|M.ulcerans_Agy99 MTLLNDIQV--------WTTACAYDHLIPGRGVGVLLDDGSQAALFRLDD
MAV_4903|M.avium_104 MTLLNDIQV--------WTSACSYDHLIPGRGVGVLLDDGSQAALFRLDD
MSMEG_0428|M.smegmatis_MC2_155 MTLTDDRKDVVAQTHSEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDD
MAB_3521c|M.abscessus_ATCC_199 -----------------------MDSLTPGRGAAVLLADDVQAALFLMPS
TH_3223|M.thermoresistible__bu --------------------------------------------------
Mflv_0386|M.gilvum_PYR-GCK GTLCAVGNIDPFSGAAVMSRGIVGDRGGRLTVQSPIKKQAFALDDGSCLD
Mvan_0298|M.vanbaalenii_PYR-1 GTVHAVGNIDPFSGAAVMSRGIVGDRGGRATVQSPIKKQAFALDDGTCLD
Mb0259|M.bovis_AF2122/97 GSVHAVGNVDPFSGAAVMSRGIVGDRGGRAMVQSPILKQAFALDDGSCLD
Rv0253|M.tuberculosis_H37Rv GSVHAVGNVDPFSGAAVMSRGIVGDRGGRAMVQSPILKQAFALDDGSCLD
MMAR_0517|M.marinum_M GSVHALGNIDPFSGAAVLSRGIVGDRDGRAAVQSPIQKQAFALDDGSCLD
MUL_1180|M.ulcerans_Agy99 GSVHALGNIDPFSGAAVLSRGIVGDRDGRAAVQSPIQKQAFALDDGSCLD
MAV_4903|M.avium_104 GTVRAVGNVDPFSGAAVLSRGIVGDRNGCPTVQSPILKQAFSLEDGTCLD
MSMEG_0428|M.smegmatis_MC2_155 GSVHAIGNIDPFSGAAVMSRGITGDRGGCLTVQSPIKKQAFALVDGVCLD
MAB_3521c|M.abscessus_ATCC_199 GELYAVGNIDPFGQAAVMSRGLTGDRGGEPTVASPLLKQVFSLIDGRCLD
TH_3223|M.thermoresistible__bu -----------------MSRGIVGDRRGEPTVASPLGKQVFSLLDGRCLD
:***:.*** * * **: **.*:* ** ***
Mflv_0386|M.gilvum_PYR-GCK NSDYALPVYPTRITEDGVVQVGS-----------
Mvan_0298|M.vanbaalenii_PYR-1 DPDHSLPVYETRITPDGEVQLAS-----------
Mb0259|M.bovis_AF2122/97 DPRVSVPVYPARVTPEGRIQVAR----VAV----
Rv0253|M.tuberculosis_H37Rv DPRVSVPVYPARVTPEGRIQVAR----VAV----
MMAR_0517|M.marinum_M DPRVSVPVYPARVTAEGKIQVAR----LAA----
MUL_1180|M.ulcerans_Agy99 DPRVSVPVHPARVTAEGKIQVAR----LAA----
MAV_4903|M.avium_104 DPSVSVPVYPVRITADGYVQVGRDYQPRAA----
MSMEG_0428|M.smegmatis_MC2_155 DPEVSLPVYRTRISADGFVEIA------------
MAB_3521c|M.abscessus_ATCC_199 DASRRLPVFEVRVIN-GNVEIGMLRSRHRNAVAA
TH_3223|M.thermoresistible__bu DEAHRLPVYDVRVVD-GIVQI---ASR-------
: :**. .*: * :::