For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KRFAFTAITASAFAVAAMGLAGTAAASTSTGGGNAGDTVTNLQKQGYSVQLNGSVSAPLSQCTVTDVHGV SAPPAGQSSAMSSTTVYVDVSCPDLNN*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_3338c | - | - | 100% (98) | hypothetical protein MAB_3338c |
| M. abscessus ATCC 19977 | MAB_4663 | - | 1e-15 | 43.62% (94) | hypothetical protein MAB_4663 |
| M. abscessus ATCC 19977 | MAB_1850c | - | 5e-11 | 37.11% (97) | hypothetical protein MAB_1850c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_1738 | - | 2e-07 | 31.68% (101) | hypothetical protein Mflv_1738 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_3680 | - | 3e-10 | 37.62% (101) | hypothetical protein MSMEG_3680 |
| M. thermoresistible (build 8) | TH_4540 | - | 3e-07 | 30.69% (101) | PUTATIVE hypothetical protein MSMEG_3680 |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_1207 | - | 1e-08 | 40.91% (88) | hypothetical protein Mvan_1207 |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_3680|M.smegmatis_MC2_155 -MKKLGFAAALAGGLTAAVIGLAGTAAAAP----SGPVSAQETINQLEAE
TH_4540|M.thermoresistible__bu -MTKLAIATLVAGGLTAATAGLTGTAVAAP----AEPGTADTVISQLQRD
Mvan_1207|M.vanbaalenii_PYR-1 --MNFTIAAVTAG-LAAAGLGLAGPAYAAP----TGPGNANDAISQLTQQ
MAB_3338c|M.abscessus_ATCC_199 -MKRFAFTAITASAFAVAAMGLAGTAAASTS---TGGGNAGDTVTNLQKQ
Mflv_1738|M.gilvum_PYR-GCK MMRTMRFAGVPAAAAVIGSLAVVAPATAQPSLPEAGNETPGATIRQLSNA
: :: *. . . .:...* * . : .. .: :*
MSMEG_3680|M.smegmatis_MC2_155 GYTVVVNRVGTTPLSDATVVSVRPGQTFSRTDSSVPGGRDTVKTVVTNKT
TH_4540|M.thermoresistible__bu GYRVIVNRIGTAPLNRATVVAIRPGQTYSRTDSGVAGAGDDIVTTVTGRT
Mvan_1207|M.vanbaalenii_PYR-1 GNQVIVKRLSDTPLSRASVVSVHPG----SGDASALG-----------QV
MAB_3338c|M.abscessus_ATCC_199 GYSVQLNGSVSAPLSQCTVTDVHGVSAPPAGQSSAMSS----------TT
Mflv_1738|M.gilvum_PYR-GCK GYDVEVNWVAGEP-SNIPLSQCTVT----RIDTSAPP------------T
* * :: * . .: ::.. .
MSMEG_3680|M.smegmatis_MC2_155 VYVDVK-------
TH_4540|M.thermoresistible__bu VYVDVR-------
Mvan_1207|M.vanbaalenii_PYR-1 VYVAVR-------
MAB_3338c|M.abscessus_ATCC_199 VYVDVSCPDLNN-
Mflv_1738|M.gilvum_PYR-GCK AWVSVNCPPDGSQ
.:* *