For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TKISIAWLRQSVAGLVVLLALTVVLGVAYPAAVWLFGRINSGSAEGSPLKDRNGCVVGSAIIGVDPQASG ADPYFHTRTSGDPAAGAPSNQGPNSEKLKADIDARRATIAARERVTPARVPADAVTGSGSSLDPDITPEY AALQIPRVAAATGLSQARVKELVDAHTSSRQWGILGEPRVNVPTLNVALGLTGPPCR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_3252c | - | - | 100% (198) | potassium-transporting ATPase C chain |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1060 | kdpC | 1e-31 | 45.74% (188) | potassium-transporting ATPase subunit C |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv1031 | kdpC | 1e-31 | 45.74% (188) | potassium-transporting ATPase subunit C |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_0633 | kdpC | 3e-14 | 50.63% (79) | potassium-transporting ATPase C chain KdpC |
| M. avium 104 | MAV_1171 | kdpC | 2e-13 | 41.58% (101) | K+-transporting ATPase, C subunit |
| M. smegmatis MC2 155 | MSMEG_5394 | - | 8e-20 | 63.38% (71) | potassium-transporting ATPase C chain |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_4761 | - | 4e-18 | 38.10% (147) | K+ transporting ATPase, KdpC subunit |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0633|M.marinum_M --MKFSSFIRMHWAAFRALLVLTVIVGLGYPLLVWLVAQLPGLRDKADGS
MAV_1171|M.avium_104 --MTLSNFIRLHWAALRALLVLTVITGLAYPLLVWVVAQFPGLRDHAEGS
Mvan_4761|M.vanbaalenii_PYR-1 ----MTRVVRQHWAALRALLFFTVVLGLAYPLLIWLIAQAPFLSDKADGS
MSMEG_5394|M.smegmatis_MC2_155 --MSFTNIVRQHTAALRALLALTVVLGLGYPVFIWLVAQLPGLQDKADGS
Mb1060|M.bovis_AF2122/97 -------MRRQLLPALTMLLVFTVITGIVYPLAVTGVGQL-FFGDQANGA
Rv1031|M.tuberculosis_H37Rv -------MRRQLLPALTMLLVFTVITGIVYPLAVTGVGQL-FFGDQANGA
MAB_3252c|M.abscessus_ATCC_199 MTKISIAWLRQSVAGLVVLLALTVVLGVAYPAAVWLFGRINSGSAEGS-P
* ..: ** :**: *: ** : ..: ... .
MMAR_0633|M.marinum_M IVEVDGKPVGSSLIGQAFTDTDGNPLPQYFQSRPSAAGDGYDPLATSASN
MAV_1171|M.avium_104 ILTANGKPVGSRLIGQLFTDKDGNPLPQYFQSRPSAAGTGYDPTSSGGSN
Mvan_4761|M.vanbaalenii_PYR-1 VVEVDGTPVGSSLIGQLYTDADGNPLPQYFQGRPSAAGDGYDPLATSASN
MSMEG_5394|M.smegmatis_MC2_155 IIEVAGKSVGSSLIGQSFTDADGNPLPQYFQPRPSAAGDGYDPMATSASN
Mb1060|M.bovis_AF2122/97 LLERDGQVIGSAHIGQQFTAA------KYFHPRPSSAGDGYDAAASSGSN
Rv1031|M.tuberculosis_H37Rv LLERDGQVIGSAHIGQQFTAA------KYFHPRPSSAGDGYDAAASSGSN
MAB_3252c|M.abscessus_ATCC_199 LKDRNGCVVGSAIIGVDPQASGADP---YFHTRTS--GD---PAAGAPSN
: * :** ** **: *.* * . : . **
MMAR_0633|M.marinum_M LGPESIVDTPGKPSLLTQVCSRSAAIGQRDGVDGTRPFCTGGGVGAVLSV
MAV_1171|M.avium_104 LGPESIVDAPGKPGLLTTVCSRSAAVAELEGVDGSRPFCTGGGVGAVLSV
Mvan_4761|M.vanbaalenii_PYR-1 LGPESIVDQPDKPSLLTLVCSRSVAIGELDGVDGTRPYCTGDGVGAVLSV
MSMEG_5394|M.smegmatis_MC2_155 LGPESVIDQPDKPSLLTQVCQRSRAVGDVDGISGARPFCTPAGVGAVLSV
Mb1060|M.bovis_AF2122/97 LG-------PTNEKLLAAVAER---------------------------V
Rv1031|M.tuberculosis_H37Rv LG-------PTNEKLLAAVAER---------------------------V
MAB_3252c|M.abscessus_ATCC_199 QG-------PNSEKLKADIDARR-------------------------AT
* * . * : : * .
MMAR_0633|M.marinum_M LGPRDERGAVLRPTKVVSVNEPCETTKRPFLDVFQGVRVQCAVTGENYST
MAV_1171|M.avium_104 IGPRDERGNVTHPARVVSVNEPCESTPTPFVSLYEGVRVECAKTGEDYSL
Mvan_4761|M.vanbaalenii_PYR-1 IGPRDAGGNVVHPTKVVSVNEPCATTPTPFVDTYEGVRVECAATGEDYRL
MSMEG_5394|M.smegmatis_MC2_155 IGPRDSHGNVITPTRVVSVNEPCADTKAPFLYTYEGVRVECAEPGENYAV
Mb1060|M.bovis_AF2122/97 TAYRKEN------------NLPADT-------------------------
Rv1031|M.tuberculosis_H37Rv TAYRKEN------------NLPADT-------------------------
MAB_3252c|M.abscessus_ATCC_199 IAARERVTP-----------------------------------------
. *.
MMAR_0633|M.marinum_M GQIVAVRGAAPDTPAVPADAVTASGSGLDPHISPSYADIQVDRVARARGV
MAV_1171|M.avium_104 GQIVPIRGAAPAAPAVPADAVTAGGSGLDPNISPAYADIQVARVAKVRHV
Mvan_4761|M.vanbaalenii_PYR-1 GQLVPLRGSASAVPAVPADAVTASGSGLDPHISPAYADLQVDRVARARGM
MSMEG_5394|M.smegmatis_MC2_155 GQIVPVRGTA--APQVPADAVTASGSGLDPDISPAYADLQVNRIASARGV
Mb1060|M.bovis_AF2122/97 --------------LVPVDAVTGSGSGLDPAISVVNAKLQAPRVAQARNI
Rv1031|M.tuberculosis_H37Rv --------------LVPVDAVTGSGSGLDPAISVVNAKLQAPRVAQARNI
MAB_3252c|M.abscessus_ATCC_199 -------------ARVPADAVTGSGSSLDPDITPEYAALQIPRVAAATGL
**.****..**.*** *: * :* *:* . :
MMAR_0633|M.marinum_M TPDQVRAVVGEHRDGRLFGFFGEACVNVLALNLDLDARFPVKSRSSGG
MAV_1171|M.avium_104 RPEQIRELVAQNSSGRALGFFGEPCVNVLQLNLQLDHRYPVTS-----
Mvan_4761|M.vanbaalenii_PYR-1 NPDEVRALVAEHTEGRTLGFLGEPRVNVLELNLALDRRG---------
MSMEG_5394|M.smegmatis_MC2_155 DPQRVRELVAQHTEGRMLGFLGEPRVNVLELNIALDTLAAHG------
Mb1060|M.bovis_AF2122/97 SIRQVERLIEDHTDARGLGFLGERAVNVLRLNLALDRL----------
Rv1031|M.tuberculosis_H37Rv SIRQVERLIEDHTDARGLGFLGERAVNVLRLNLALDRL----------
MAB_3252c|M.abscessus_ATCC_199 SQARVKELVDAHTSSRQWGILGEPRVNVPTLNVALGLTGPPCR-----
.:. :: : ..* *::** *** **: *.