For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TDDTPFNERPTAVINEFNDEVAREFRANGGEVGGQFAGVPILLLTNTGAKSGQQRLNPLAYFNIDGKIYI VGSFGGADKDPAWVYNLRANPDAHIDIGTDGYDVVAHELSLAERDALYPKVVELVPVFAEYQEKTARPIP IFELRRT*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_2860c | - | - | 100% (148) | hypothetical protein MAB_2860c |
| M. abscessus ATCC 19977 | MAB_2835 | - | 1e-36 | 53.28% (137) | hypothetical protein MAB_2835 |
| M. abscessus ATCC 19977 | MAB_0155 | - | 2e-26 | 39.04% (146) | hypothetical protein MAB_0155 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3577 | - | 4e-23 | 40.68% (118) | hypothetical protein Mb3577 |
| M. gilvum PYR-GCK | Mflv_3783 | - | 2e-45 | 61.76% (136) | hypothetical protein Mflv_3783 |
| M. tuberculosis H37Rv | Rv3547 | - | 4e-23 | 40.68% (118) | hypothetical protein Rv3547 |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_2159 | - | 1e-43 | 60.15% (133) | hypothetical protein MMAR_2159 |
| M. avium 104 | MAV_3442 | - | 4e-45 | 61.31% (137) | hypothetical protein MAV_3442 |
| M. smegmatis MC2 155 | MSMEG_3004 | - | 2e-48 | 61.33% (150) | hypothetical protein MSMEG_3004 |
| M. thermoresistible (build 8) | TH_0360 | - | 1e-23 | 40.17% (117) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_1549 | - | 1e-22 | 41.09% (129) | hypothetical protein MUL_1549 |
| M. vanbaalenii PYR-1 | Mvan_2616 | - | 2e-44 | 61.76% (136) | hypothetical protein Mvan_2616 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_2159|M.marinum_M --------------------MTRGIPDAETIKAFNSNIVDEFRANGGK-V
MAV_3442|M.avium_104 --------------------MT-DIPDTGTINAFNQSIIDEFRANDGK-V
Mflv_3783|M.gilvum_PYR-GCK -------------MTAD--DKDKLIADTAALDEFNRAIVEEFRANGGK-V
Mvan_2616|M.vanbaalenii_PYR-1 -------------MTEL--DKDKLVADTAALDEFNRNIVEEFRANGGK-V
MSMEG_3004|M.smegmatis_MC2_155 -------------MTDDSIDKEKLYSDTAALDDFNSKVVEEFRANGGK-V
MAB_2860c|M.abscessus_ATCC_199 -------------MTDD---TPFNERPTAVINEFNDEVAREFRANGGE-V
MUL_1549|M.ulcerans_Agy99 MVSAALIAAGCGGARPRVVRMPLEGEYAPSPLDWSREQADKYLESGGT-E
Mb3577|M.bovis_AF2122/97 -------------MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGL
Rv3547|M.tuberculosis_H37Rv -------------MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGL
TH_0360|M.thermoresistible__bu ----------MTAMAKSPPPNLNSPWADVFIKWMARLNTWAYRASGGR-L
: ..*
MMAR_2159|M.marinum_M GGPFAGSDLLLLTTTGAKSGRPRLAPLVYLRIDGKMFIVGSFAGADVDPA
MAV_3442|M.avium_104 GGQFEGADLLLLHTTGAKSGQPRVSPLAYFRIDGKLLVIGSFAGAPVSPA
Mflv_3783|M.gilvum_PYR-GCK GGPFEGATLLLLHTTGAKSGKTRLSPLAYLTIDGRMIIVGSYAGAPRHPA
Mvan_2616|M.vanbaalenii_PYR-1 GGPFEGATLLLLHTTGAKSGTSRLSPLAYLTIDDKMLIVGSYAGAPKHPA
MSMEG_3004|M.smegmatis_MC2_155 GGPFENGTLLLLHTTGAKSGQPRVSPLAYLPVDGKILIVGSYAGGPKHPA
MAB_2860c|M.abscessus_ATCC_199 GGQFAGVPILLLTNTGAKSGQQRLNPLAYFNIDGKIYIVGSFGGADKDPA
MUL_1549|M.ulcerans_Agy99 GTQLQGKPVVLLTTVGAKSGKLRKTPLMRVEHNGEYAIVASLGGAPKNPV
Mb3577|M.bovis_AF2122/97 GGTFQKIPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPM
Rv3547|M.tuberculosis_H37Rv GGTFQKIPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPM
TH_0360|M.thermoresistible__bu GGTMFRAPVALLTTTGRKTGQPRVSPLLYLRDGERIIVAASRGGSDKNPM
* : : ** ..* *:* * ** . . . : .* .*. *
MMAR_2159|M.marinum_M WVHNLRSDARAHVEVGTDAFDVTARELPPAERDELFPKVAAAAAGFGDYQ
MAV_3442|M.avium_104 WVHNLRANPAARVEIGTDSFDVTARELPREERDALFAQVAAAAPGFAEYQ
Mflv_3783|M.gilvum_PYR-GCK WVHNVRAHPRAFIEIGTDAYDVDVRELPDGERDAMYPKLVELAPAFGEYQ
Mvan_2616|M.vanbaalenii_PYR-1 WVHNLRAHRKAYIEVGTDAYDVDVRELPDDERDATYPKIVAIAPVFAEYQ
MSMEG_3004|M.smegmatis_MC2_155 WVHNLRANPNAHIEIGTEAYDVVARELPDDERDATYPKIVEIAPVFAEYQ
MAB_2860c|M.abscessus_ATCC_199 WVYNLRANPDAHIDIGTDGYDVVAHELSLAERDALYPKVVELVPVFAEYQ
MUL_1549|M.ulcerans_Agy99 WYYNVVQNPRVELQVGTVIRDYDAREVFDHERSIWWERAVGVWPDYAEYQ
Mb3577|M.bovis_AF2122/97 WYLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPSYQDYQ
Rv3547|M.tuberculosis_H37Rv WYLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPSYQDYQ
TH_0360|M.thermoresistible__bu WYLNLKANPEVSVQIRREVLELTARDATEAERARYWPQLVAMYPTFEDYQ
* *: . . ::: : .:: ** : : . . : :**
MMAR_2159|M.marinum_M ARTSRVIPLFELQRA-------
MAV_3442|M.avium_104 AKTSRVIPLFELIRT-------
Mflv_3783|M.gilvum_PYR-GCK AKTTRVIPLFELTRAE------
Mvan_2616|M.vanbaalenii_PYR-1 AKTDRAIPLFELTRA-------
MSMEG_3004|M.smegmatis_MC2_155 ANTTRQIPLFELIRA-------
MAB_2860c|M.abscessus_ATCC_199 EKTARPIPIFELRRT-------
MUL_1549|M.ulcerans_Agy99 KKTDRQIPVFVLTPVS------
Mb3577|M.bovis_AF2122/97 SWTDRTIPIVVCEP--------
Rv3547|M.tuberculosis_H37Rv SWTDRTIPIVVCEP--------
TH_0360|M.thermoresistible__bu RWTDRVIPLVVCEPRSAANQEP
* * **:.