For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RDFICPQCGQHLAFENSVCLSCGSHLGFSLDQKALLVLAADAAPGFVDADDHQLCANLHVAECNWLVSGA SAGTLCASCALTRTRPNDADTAALPAFAEAEKAKRRLIAELAELRLPVTGRDTDPEFGLAFDLLSSEQEQ VMTGHHNGVITLDLAEGDDVHREQLRISMDEPYRTLLGHFRHEIGHYFYYRLVGGSAEYLERFHALFGDA DADYQAALDRHYQQGAPEGWEESYVSSYATMHPAEDWAETFAHYLHIRDTLDTAASFALAPAGGTFDRRV LGPSGFDTIIEMWLPLAWSLNMVNRSMGHLDLYPFVLPGPVLEKMRLIHEIVMAAGDAAE*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_2856c | - | - | 100% (341) | hypothetical protein MAB_2856c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2598c | - | 1e-141 | 71.77% (333) | hypothetical protein Mb2598c |
| M. gilvum PYR-GCK | Mflv_3768 | - | 1e-152 | 75.00% (336) | hypothetical protein Mflv_3768 |
| M. tuberculosis H37Rv | Rv2568c | - | 1e-141 | 71.77% (333) | hypothetical protein Rv2568c |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_2163 | - | 1e-142 | 72.02% (336) | hypothetical protein MMAR_2163 |
| M. avium 104 | MAV_3437 | - | 1e-142 | 70.00% (340) | hypothetical protein MAV_3437 |
| M. smegmatis MC2 155 | MSMEG_3019 | - | 1e-147 | 74.18% (337) | hypothetical protein MSMEG_3019 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_1747 | - | 1e-140 | 71.13% (336) | hypothetical protein MUL_1747 |
| M. vanbaalenii PYR-1 | Mvan_2631 | - | 1e-152 | 75.60% (336) | hypothetical protein Mvan_2631 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2598c|M.bovis_AF2122/97 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADD--------
Rv2568c|M.tuberculosis_H37Rv MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADD--------
MAV_3437|M.avium_104 MRDFTCPKCGQRLTFENSTCLNCGSALGFSIEQMALLVISEDETSGHAGF
MMAR_2163|M.marinum_M MRDFHCPNCGQRLAFENSACLSCGSALGFSLDQMALMVITGRDQSEHAGS
MUL_1747|M.ulcerans_Agy99 MRDFHCPNCGQRLTFENSACLSCGSALGFSLDQMALMVITGRDQSEHAGA
MSMEG_3019|M.smegmatis_MC2_155 MRDFTCPNCGQRLAFENSLCLSCGSALGFSLSDMALLVITEKDQSDHAGA
Mflv_3768|M.gilvum_PYR-GCK MRDFTCPNCGQRLSFENSVCLNCKSALGFSLDDMALLVIAPTEESEHAGA
Mvan_2631|M.vanbaalenii_PYR-1 MRDFTCPNCGQRLSFENSVCLNCGSALGFSLDDMALLVIAPADESEHAGA
MAB_2856c|M.abscessus_ATCC_199 MRDFICPQCGQHLAFENSVCLSCGSHLGFSLDQKALLVLAADAAP---GF
**** **:***:*:**** **.* * ****: **:*::
Mb2598c|M.bovis_AF2122/97 ---ADVQLCANLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAE
Rv2568c|M.tuberculosis_H37Rv ---ADVQLCANLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAE
MAV_3437|M.avium_104 VPASEYQLCANLLLAECNWLVPVNEPRLLCASCVLTTERPNDADSVGLAE
MMAR_2163|M.marinum_M VAADDYQLCKNLHLAECNWLVPVGRRDGLCESCVLTVLRPHDGDTVGLTE
MUL_1747|M.ulcerans_Agy99 VAADDYQLCKNLHLAECSWLVPVGQRDGLCESCVLTVLRPHDGDTVGLTE
MSMEG_3019|M.smegmatis_MC2_155 VDEQKYKLCANLYAAECNWLVRVGEGDELCESCALTRTRPADSDTKAMAA
Mflv_3768|M.gilvum_PYR-GCK VDEREYQLCANLHLAECNWLVEKGPIAKLCVSCALTRTRPNDADVVALAA
Mvan_2631|M.vanbaalenii_PYR-1 VDESHYQLCANLHLAECNWLVQKGPIAKLCVSCALTRTRPNDADTVALAA
MAB_2856c|M.abscessus_ATCC_199 VDADDHQLCANLHVAECNWLVSGASAGTLCASCALTRTRPNDADTAALPA
. :** ** *:*.*** ** **.** ** * : .:.
Mb2598c|M.bovis_AF2122/97 FARAEGAKRRLIAELHELKLPIVGRDQDPDHGLAFRLLSSAHENVTTGHQ
Rv2568c|M.tuberculosis_H37Rv FARAEGAKRRLIAELHELKLPIVGRDQDPDHGLAFRLLSSAHENVTTGHQ
MAV_3437|M.avium_104 FARAEAAKRRLIAELHELRLPIVGRDQDPDYGLAFRLLSSAHENVLTGHQ
MMAR_2163|M.marinum_M FARAEAAKRRLIAELHELKLPIIGRDEDPAYGLAFRLLSSAHENVITGHE
MUL_1747|M.ulcerans_Agy99 FARAEAAKRRLIAELHELKLPIIGRDEDPAYGLAFRLLSSAHENVITGHE
MSMEG_3019|M.smegmatis_MC2_155 FAGAERAKRRLIVELHELKLPIVSRAEDPEYGLAFDLLSSEFDKVFTGHE
Mflv_3768|M.gilvum_PYR-GCK FATAESAKRRLIAELCELKLPIVGRDLDPQFGLAFDLLSSQFEKVFTGHE
Mvan_2631|M.vanbaalenii_PYR-1 FATAEKAKRRLLAELYELKLPIVGRDHDPQYGLAFDLLSSQFDKVFTGHA
MAB_2856c|M.abscessus_ATCC_199 FAEAEKAKRRLIAELAELRLPVTGRDTDPEFGLAFDLLSSEQEQVMTGHH
** ** *****:.** **:**: .* ** .**** **** ::* ***
Mb2598c|M.bovis_AF2122/97 NGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHYYFYRLIASS
Rv2568c|M.tuberculosis_H37Rv NGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHYYFYRLIASS
MAV_3437|M.avium_104 NGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHYYFYRLIAPH
MMAR_2163|M.marinum_M DGVITLDLAEGDDVHREQLRVEMEEPYRTLLGHFRHEIGHYYFYRLIAPS
MUL_1747|M.ulcerans_Agy99 DGVITLDLAEGDDVHRGQLRVEMEEPYRTLLGHFRHEIGHYYFYRLIAPS
MSMEG_3019|M.smegmatis_MC2_155 NGVITLDLAEGDDVHREQLRIAMDEPYRTLLGHFRHEIGHYYFYRLVAPS
Mflv_3768|M.gilvum_PYR-GCK NGVITLDLAEGDDVHREQLRISMDEPYRTLLGHFRHEIGHYYQYRLIGTS
Mvan_2631|M.vanbaalenii_PYR-1 DGVITLDLAEGDDVHREQLRISMDEPYRTLLGHFRHEIGHYYQYRLIGTS
MAB_2856c|M.abscessus_ATCC_199 NGVITLDLAEGDDVHREQLRISMDEPYRTLLGHFRHEIGHYFYYRLVGGS
:*************** ***: *:*****************: ***:.
Mb2598c|M.bovis_AF2122/97 SDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASED
Rv2568c|M.tuberculosis_H37Rv SDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASED
MAV_3437|M.avium_104 PDHLRRFNELFGDPDADYQQSLDRHYSEGAPEGWQENFVSSYATMHASED
MMAR_2163|M.marinum_M DDHLARFRELFGDPDADYQAALDRHYRDGAPENWQERYVSSYATMHPAED
MUL_1747|M.ulcerans_Agy99 DDHLARFRELFGDPDADYQAALDRHYSDGAPENWQERYVSSYATMHPAED
MSMEG_3019|M.smegmatis_MC2_155 AEFTAKFNELFGDPDADYQAALDRHYQDGPPAGWEDDFVSSYATMHAAED
Mflv_3768|M.gilvum_PYR-GCK QDYLDRYHELFGDPEADYQAALDRHYSEGAPAGWEQDYVSSYATMHPAED
Mvan_2631|M.vanbaalenii_PYR-1 QDYLQRYHELFGDPEADYQAALDRHYSEGAPAGWEDDYVSSYATMHPAED
MAB_2856c|M.abscessus_ATCC_199 AEYLERFHALFGDADADYQAALDRHYQQGAPEGWEESYVSSYATMHPAED
:. ::. ****.:***. :***** *.* .*:: :********.:**
Mb2598c|M.bovis_AF2122/97 WAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL
Rv2568c|M.tuberculosis_H37Rv WAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL
MAV_3437|M.avium_104 WAETFAHYLHIRDTLDTSAWCGLAPASATIDRPALGPSAFQTIIDTWLPL
MMAR_2163|M.marinum_M WAETFAHYLHIRDTLDTAAWCGFAPASATFDRPALGPSAFPTIIDMWLPL
MUL_1747|M.ulcerans_Agy99 WAETFAHYLHIRDTLDTAAWCGFAPASATFDRPALGPSAFPTIIDMWLPL
MSMEG_3019|M.smegmatis_MC2_155 WAETFAHYLHIRDTLDTAAAFGFAPAGATFDRRALGPSAFDTIIEMWLPL
Mflv_3768|M.gilvum_PYR-GCK WAETFAHYLHIRDTLDTAAAFGFAPATATYDRRVLGPSGFDTLIDLWLPL
Mvan_2631|M.vanbaalenii_PYR-1 WAETFAHYLHIRDTLDTAAAFGFAPAGATFERKVLGPSSFDTMIEMWLPL
MAB_2856c|M.abscessus_ATCC_199 WAETFAHYLHIRDTLDTAASFALAPAGGTFDRRVLGPSGFDTIIEMWLPL
*************:***:* .:*** .* :* .****.* *:*: ****
Mb2598c|M.bovis_AF2122/97 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPAHSRR
Rv2568c|M.tuberculosis_H37Rv SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPAHSRR
MAV_3437|M.avium_104 SWSLNMVNRSMGHDDLYPFVLPAAVMEKMQFIHAVVDGAG----------
MMAR_2163|M.marinum_M SWSLNMVNRSMGHDDLYPFVLPVAVLEKMRFVHTVVDQVTQAPCGPAALS
MUL_1747|M.ulcerans_Agy99 SWSLNMVNRSMGHDDLYPFVLPVAVLEKMRFVHTVVDQVTQAPCGPAALS
MSMEG_3019|M.smegmatis_MC2_155 AWSLNMVNRSMGHDDLYPFVLPPAVLEKMRFVHTVIDEVTSA--------
Mflv_3768|M.gilvum_PYR-GCK SWALNQVNRSMGKEDVYPFVLPPPVLEKMRFIHTVIDEITSSPAKLAEVG
Mvan_2631|M.vanbaalenii_PYR-1 SWALNMVNRSMGKDDLYPFVLPPSVLEKMRFIHTVIDEITSNPAKLAEVG
MAB_2856c|M.abscessus_ATCC_199 AWSLNMVNRSMGHLDLYPFVLPGPVLEKMRLIHEIVMAAGDAAE------
:*:** ******: *:****** .*:***:::* ::
Mb2598c|M.bovis_AF2122/97 TV-----------
Rv2568c|M.tuberculosis_H37Rv TV-----------
MAV_3437|M.avium_104 -------------
MMAR_2163|M.marinum_M G------------
MUL_1747|M.ulcerans_Agy99 G------------
MSMEG_3019|M.smegmatis_MC2_155 -------------
Mflv_3768|M.gilvum_PYR-GCK APAEDQSQQLD--
Mvan_2631|M.vanbaalenii_PYR-1 APVEDQNQQLDQR
MAB_2856c|M.abscessus_ATCC_199 -------------